<BASE HREF="http://pepbase.iab.keio.ac.jp/phospho/Arabidopsis09/spec_html/txt_new2/5043_txt.htm"><meta http-equiv="Content-Type" content="text/html; charset=UTF-8" /><HTML><HEAD><TITLE>Mascot Search Results: Peptide View</TITLE></HEAD><BODY BGCOLOR="#ffffff" ALINK="#0000ff" VLINK="#0000ff"><H3>Peptide View</H3>MS/MS Fragmentation of <B><FONT COLOR=#FF0000>WPAEVQSPK</FONT></B><BR>Found in <B><FONT COLOR=#FF0000>AT3G05090.1</FONT></B>, transducin family protein / WD-40 repeat family protein <BR><P>Match to Query 1466: 1120.494862 from(561.254707,2+)<BR>Title: Elution from: 32.127 to 32.127 scan no 2930 polarity:+<BR>Data file \\MASS-DATA2\share\Orbitrap\2008-04\080402ns\o070510_014TA.mgf<BR><P><img SRC="http://pepbase.iab.keio.ac.jp/phospho/Arabidopsis09/spec_html/spec/5043_spec.gif" HEIGHT=300 WIDTH=550><FONT FACE='Courier New,Courier,monospace'><PRE><B>Monoisotopic mass of neutral peptide Mr(calc):</B> 1120.4954<B>Fixed modifications: </B>Carbamidomethyl (C)<B>Variable modifications: </B><B>S7 : </B>Phospho (ST), with neutral losses 0.0000(shown in table), 97.9769<B>Ions Score:</B> 36 <B>Expect:</B> 0.0014 <B>Matches (<FONT COLOR=#FF0000>Bold Red</FONT>):</B> 23/126 fragment ions using 33 most intense peaks</PRE></FONT><TABLE BORDER=1 CELLSPACING=0 CELLPADDING=2> <TR BGCOLOR=#cccccc> <TH>#</TH> <TH>b</TH> <TH>b<SUP>++</SUP></TH> <TH>b*</TH> <TH>b*<SUP>++</SUP></TH> <TH>b<SUP>0</SUP></TH> <TH>b<SUP>0++</SUP></TH> <TH>Seq.</TH> <TH>y</TH> <TH>y<SUP>++</SUP></TH> <TH>y*</TH> <TH>y*<SUP>++</SUP></TH> <TH>y<SUP>0</SUP></TH> <TH>y<SUP>0++</SUP></TH> <TH>#</TH> </TR> <TR ALIGN="RIGHT"> <TD><B><FONT COLOR=#0000FF>1</FONT></B></TD> <TD> 187.0866</TD> <TD> 94.0469</TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD ALIGN="CENTER"><B><FONT COLOR=#0000FF>W</FONT></B></TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD><B><FONT COLOR=#0000FF>9</FONT></B></TD> </TR> <TR ALIGN="RIGHT"> <TD><B><FONT COLOR=#0000FF>2</FONT></B></TD> <TD> 284.1393</TD> <TD> 142.5733</TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD ALIGN="CENTER"><B><FONT COLOR=#0000FF>P</FONT></B></TD> <TD><B><FONT COLOR=#FF0000> 935.4234</FONT></B></TD> <TD><B><FONT COLOR=#FF0000> 468.2153</FONT></B></TD> <TD> 918.3968</TD> <TD> 459.7020</TD> <TD> 917.4128</TD> <TD> 459.2100</TD> <TD><B><FONT COLOR=#0000FF>8</FONT></B></TD> </TR> <TR ALIGN="RIGHT"> <TD><B><FONT COLOR=#0000FF>3</FONT></B></TD> <TD> 355.1765</TD> <TD> 178.0919</TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD ALIGN="CENTER"><B><FONT COLOR=#0000FF>A</FONT></B></TD> <TD><B><FONT COLOR=#FF0000> 838.3706</FONT></B></TD> <TD> 419.6889</TD> <TD> 821.3441</TD> <TD><B><FONT COLOR=#FF0000> 411.1757</FONT></B></TD> <TD> 820.3600</TD> <TD><B><FONT COLOR=#FF0000> 410.6837</FONT></B></TD> <TD><B><FONT COLOR=#0000FF>7</FONT></B></TD> </TR> <TR ALIGN="RIGHT"> <TD><B><FONT COLOR=#0000FF>4</FONT></B></TD> <TD> 484.2190</TD> <TD> 242.6132</TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD> 466.2085</TD> <TD> 233.6079</TD> <TD ALIGN="CENTER"><B><FONT COLOR=#0000FF>E</FONT></B></TD> <TD><B><FONT COLOR=#FF0000> 767.3335</FONT></B></TD> <TD> 384.1704</TD> <TD> 750.3069</TD> <TD> 375.6571</TD> <TD><B><FONT COLOR=#FF0000> 749.3229</FONT></B></TD> <TD> 375.1651</TD> <TD><B><FONT COLOR=#0000FF>6</FONT></B></TD> </TR> <TR ALIGN="RIGHT"> <TD><B><FONT COLOR=#0000FF>5</FONT></B></TD> <TD> 583.2875</TD> <TD> 292.1474</TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD> 565.2769</TD> <TD> 283.1421</TD> <TD ALIGN="CENTER"><B><FONT COLOR=#0000FF>V</FONT></B></TD> <TD><B><FONT COLOR=#FF0000> 638.2909</FONT></B></TD> <TD> 319.6491</TD> <TD> 621.2644</TD> <TD> 311.1358</TD> <TD> 620.2803</TD> <TD><B><FONT COLOR=#FF0000> 310.6438</FONT></B></TD> <TD><B><FONT COLOR=#0000FF>5</FONT></B></TD> </TR> <TR ALIGN="RIGHT"> <TD><B><FONT COLOR=#0000FF>6</FONT></B></TD> <TD> 711.3460</TD> <TD> 356.1767</TD> <TD> 694.3195</TD> <TD> 347.6634</TD> <TD> 693.3355</TD> <TD> 347.1714</TD> <TD ALIGN="CENTER"><B><FONT COLOR=#0000FF>Q</FONT></B></TD> <TD><B><FONT COLOR=#FF0000> 539.2225</FONT></B></TD> <TD> 270.1149</TD> <TD><B><FONT COLOR=#FF0000> 522.1959</FONT></B></TD> <TD> 261.6016</TD> <TD><B><FONT COLOR=#FF0000> 521.2119</FONT></B></TD> <TD> 261.1096</TD> <TD><B><FONT COLOR=#0000FF>4</FONT></B></TD> </TR> <TR ALIGN="RIGHT"> <TD><B><FONT COLOR=#0000FF>7</FONT></B></TD> <TD> 878.3444</TD> <TD> 439.6758</TD> <TD> 861.3178</TD> <TD> 431.1626</TD> <TD> 860.3338</TD> <TD> 430.6706</TD> <TD ALIGN="CENTER"><B><FONT COLOR=#0000FF>S</FONT></B></TD> <TD><B><FONT COLOR=#FF0000> 411.1639</FONT></B></TD> <TD> 206.0856</TD> <TD> 394.1374</TD> <TD> 197.5723</TD> <TD> 393.1533</TD> <TD> 197.0803</TD> <TD><B><FONT COLOR=#0000FF>3</FONT></B></TD> </TR> <TR ALIGN="RIGHT"> <TD><B><FONT COLOR=#0000FF>8</FONT></B></TD> <TD> 975.3972</TD> <TD> 488.2022</TD> <TD> 958.3706</TD> <TD> 479.6889</TD> <TD> 957.3866</TD> <TD> 479.1969</TD> <TD ALIGN="CENTER"><B><FONT COLOR=#0000FF>P</FONT></B></TD> <TD><B><FONT COLOR=#FF0000> 244.1656</FONT></B></TD> <TD> 122.5864</TD> <TD> 227.1390</TD> <TD> 114.0731</TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD><B><FONT COLOR=#0000FF>2</FONT></B></TD> </TR> <TR ALIGN="RIGHT"> <TD><B><FONT COLOR=#0000FF>9</FONT></B></TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD ALIGN="CENTER"><B><FONT COLOR=#0000FF>K</FONT></B></TD> <TD> 147.1128</TD> <TD> 74.0600</TD> <TD> 130.0863</TD> <TD> 65.5468</TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD><B><FONT COLOR=#0000FF>1</FONT></B></TD> </TR></TABLE><P><img SRC="http://pepbase.iab.keio.ac.jp/phospho/Arabidopsis09/spec_html/error/5043_error.gif" WIDTH=450 HEIGHT=150 ALT="Error Distribution"> <P>NCBI <B>BLAST</B> search of <A HREF="http://www.ncbi.nlm.nih.gov/blast/Blast.cgi?ALIGNMENTS=50&ALIGNMENT_VIEW=Pairwise&AUTO_FORMAT=Semiauto&CLIENT=web&DATABASE=nr&DESCRIPTIONS=100&ENTREZ_QUERY=(none)&EXPECT=20000&FORMAT_BLOCK_ON_RESPAGE=None&FORMAT_OBJECT=Alignment&FORMAT_TYPE=HTML&GAPCOSTS=9+1&I_THRESH=0.001&LAYOUT=TwoWindows&MATRIX_NAME=PAM30&NCBI_GI=on&PAGE=Proteins&PROGRAM=blastp&QUERY=WPAEVQSPK&SERVICE=plain&SET_DEFAULTS.x=32&SET_DEFAULTS.y=7&SHOW_OVERVIEW=on&WORD_SIZE=2&END_OF_HTTPGET=Yes" TARGET="_blank">WPAEVQSPK</A><BR>(Parameters: blastp, nr protein database, expect=20000, no filter, PAM30)<BR>Other BLAST <A HREF="../help/blast_help.html#web">web gateways</A><BR> <p><b>All matches to this query</b><br><p><TABLE BORDER=1 CELLSPACING=0 CELLPADDING=2> <TR BGCOLOR=#cccccc> <TH>Score</TH> <TH>Mr(calc):</TH> <TH>Delta</TH> <TH>Sequence</TH> </TR><tr><td>36.1</td><td>1120.4954</td><td>-0.0005</td><td><a href="peptide_view_all_ponl.pl?file=../data/20080402/F021717.dat&hit=1&px=1&query=1466&section=5&ave_thresh=0">WPAEVQSPK</a></td></tr><tr><td>0.3</td><td>1120.4954</td><td>-0.0005</td><td><a href="peptide_view_all_ponl.pl?file=../data/20080402/F021717.dat&hit=2&px=1&query=1466&section=5&ave_thresh=0">SNFSSFKPK</a></td></tr><tr><td>0.3</td><td>1120.4954</td><td>-0.0005</td><td><a href="peptide_view_all_ponl.pl?file=../data/20080402/F021717.dat&hit=3&px=1&query=1466&section=5&ave_thresh=0">SNFSSFKPK</a></td></tr></table><p><P><TABLE WIDTH="100%" BORDER="2" CELLSPACING="2" CELLPADDING="1"><TR><TD ALIGN="CENTER" NOWRAP><B>Mascot:</B>&nbsp;<A HREF="http://www.matrixscience.com/">http://www.matrixscience.com/</A></TD></TR></TABLE></body></html> <BASE HREF="http://pepbase.iab.keio.ac.jp/phospho/Arabidopsis09/spec_html/txt_new2/5043_txt.htm"><meta http-equiv="Content-Type" content="text/html; charset=UTF-8" /><HTML><HEAD><TITLE>Mascot Search Results: Peptide View</TITLE></HEAD><BODY BGCOLOR="#ffffff" ALINK="#0000ff" VLINK="#0000ff"><H3>Peptide View</H3>MS/MS Fragmentation of <B><FONT COLOR=#FF0000>WPAEVQSPK</FONT></B><BR>Found in <B><FONT COLOR=#FF0000>AT3G05090.1</FONT></B>, transducin family protein / WD-40 repeat family protein <BR><P>Match to Query 1466: 1120.494862 from(561.254707,2+)<BR>Title: Elution from: 32.127 to 32.127 scan no 2930 polarity:+<BR>Data file \\MASS-DATA2\share\Orbitrap\2008-04\080402ns\o070510_014TA.mgf<BR><P><img SRC="http://pepbase.iab.keio.ac.jp/phospho/Arabidopsis09/spec_html/spec/5043_spec.gif" HEIGHT=300 WIDTH=550><FONT FACE='Courier New,Courier,monospace'><PRE><B>Monoisotopic mass of neutral peptide Mr(calc):</B> 1120.4954<B>Fixed modifications: </B>Carbamidomethyl (C)<B>Variable modifications: </B><B>S7 : </B>Phospho (ST), with neutral losses 0.0000(shown in table), 97.9769<B>Ions Score:</B> 36 <B>Expect:</B> 0.0014 <B>Matches (<FONT COLOR=#FF0000>Bold Red</FONT>):</B> 23/126 fragment ions using 33 most intense peaks</PRE></FONT><TABLE BORDER=1 CELLSPACING=0 CELLPADDING=2> <TR BGCOLOR=#cccccc> <TH>#</TH> <TH>b</TH> <TH>b<SUP>++</SUP></TH> <TH>b*</TH> <TH>b*<SUP>++</SUP></TH> <TH>b<SUP>0</SUP></TH> <TH>b<SUP>0++</SUP></TH> <TH>Seq.</TH> <TH>y</TH> <TH>y<SUP>++</SUP></TH> <TH>y*</TH> <TH>y*<SUP>++</SUP></TH> <TH>y<SUP>0</SUP></TH> <TH>y<SUP>0++</SUP></TH> <TH>#</TH> </TR> <TR ALIGN="RIGHT"> <TD><B><FONT COLOR=#0000FF>1</FONT></B></TD> <TD> 187.0866</TD> <TD> 94.0469</TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD ALIGN="CENTER"><B><FONT COLOR=#0000FF>W</FONT></B></TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD><B><FONT COLOR=#0000FF>9</FONT></B></TD> </TR> <TR ALIGN="RIGHT"> <TD><B><FONT COLOR=#0000FF>2</FONT></B></TD> <TD> 284.1393</TD> <TD> 142.5733</TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD ALIGN="CENTER"><B><FONT COLOR=#0000FF>P</FONT></B></TD> <TD><B><FONT COLOR=#FF0000> 935.4234</FONT></B></TD> <TD><B><FONT COLOR=#FF0000> 468.2153</FONT></B></TD> <TD> 918.3968</TD> <TD> 459.7020</TD> <TD> 917.4128</TD> <TD> 459.2100</TD> <TD><B><FONT COLOR=#0000FF>8</FONT></B></TD> </TR> <TR ALIGN="RIGHT"> <TD><B><FONT COLOR=#0000FF>3</FONT></B></TD> <TD> 355.1765</TD> <TD> 178.0919</TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD ALIGN="CENTER"><B><FONT COLOR=#0000FF>A</FONT></B></TD> <TD><B><FONT COLOR=#FF0000> 838.3706</FONT></B></TD> <TD> 419.6889</TD> <TD> 821.3441</TD> <TD><B><FONT COLOR=#FF0000> 411.1757</FONT></B></TD> <TD> 820.3600</TD> <TD><B><FONT COLOR=#FF0000> 410.6837</FONT></B></TD> <TD><B><FONT COLOR=#0000FF>7</FONT></B></TD> </TR> <TR ALIGN="RIGHT"> <TD><B><FONT COLOR=#0000FF>4</FONT></B></TD> <TD> 484.2190</TD> <TD> 242.6132</TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD> 466.2085</TD> <TD> 233.6079</TD> <TD ALIGN="CENTER"><B><FONT COLOR=#0000FF>E</FONT></B></TD> <TD><B><FONT COLOR=#FF0000> 767.3335</FONT></B></TD> <TD> 384.1704</TD> <TD> 750.3069</TD> <TD> 375.6571</TD> <TD><B><FONT COLOR=#FF0000> 749.3229</FONT></B></TD> <TD> 375.1651</TD> <TD><B><FONT COLOR=#0000FF>6</FONT></B></TD> </TR> <TR ALIGN="RIGHT"> <TD><B><FONT COLOR=#0000FF>5</FONT></B></TD> <TD> 583.2875</TD> <TD> 292.1474</TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD> 565.2769</TD> <TD> 283.1421</TD> <TD ALIGN="CENTER"><B><FONT COLOR=#0000FF>V</FONT></B></TD> <TD><B><FONT COLOR=#FF0000> 638.2909</FONT></B></TD> <TD> 319.6491</TD> <TD> 621.2644</TD> <TD> 311.1358</TD> <TD> 620.2803</TD> <TD><B><FONT COLOR=#FF0000> 310.6438</FONT></B></TD> <TD><B><FONT COLOR=#0000FF>5</FONT></B></TD> </TR> <TR ALIGN="RIGHT"> <TD><B><FONT COLOR=#0000FF>6</FONT></B></TD> <TD> 711.3460</TD> <TD> 356.1767</TD> <TD> 694.3195</TD> <TD> 347.6634</TD> <TD> 693.3355</TD> <TD> 347.1714</TD> <TD ALIGN="CENTER"><B><FONT COLOR=#0000FF>Q</FONT></B></TD> <TD><B><FONT COLOR=#FF0000> 539.2225</FONT></B></TD> <TD> 270.1149</TD> <TD><B><FONT COLOR=#FF0000> 522.1959</FONT></B></TD> <TD> 261.6016</TD> <TD><B><FONT COLOR=#FF0000> 521.2119</FONT></B></TD> <TD> 261.1096</TD> <TD><B><FONT COLOR=#0000FF>4</FONT></B></TD> </TR> <TR ALIGN="RIGHT"> <TD><B><FONT COLOR=#0000FF>7</FONT></B></TD> <TD> 878.3444</TD> <TD> 439.6758</TD> <TD> 861.3178</TD> <TD> 431.1626</TD> <TD> 860.3338</TD> <TD> 430.6706</TD> <TD ALIGN="CENTER"><B><FONT COLOR=#0000FF>S</FONT></B></TD> <TD><B><FONT COLOR=#FF0000> 411.1639</FONT></B></TD> <TD> 206.0856</TD> <TD> 394.1374</TD> <TD> 197.5723</TD> <TD> 393.1533</TD> <TD> 197.0803</TD> <TD><B><FONT COLOR=#0000FF>3</FONT></B></TD> </TR> <TR ALIGN="RIGHT"> <TD><B><FONT COLOR=#0000FF>8</FONT></B></TD> <TD> 975.3972</TD> <TD> 488.2022</TD> <TD> 958.3706</TD> <TD> 479.6889</TD> <TD> 957.3866</TD> <TD> 479.1969</TD> <TD ALIGN="CENTER"><B><FONT COLOR=#0000FF>P</FONT></B></TD> <TD><B><FONT COLOR=#FF0000> 244.1656</FONT></B></TD> <TD> 122.5864</TD> <TD> 227.1390</TD> <TD> 114.0731</TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD><B><FONT COLOR=#0000FF>2</FONT></B></TD> </TR> <TR ALIGN="RIGHT"> <TD><B><FONT COLOR=#0000FF>9</FONT></B></TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD ALIGN="CENTER"><B><FONT COLOR=#0000FF>K</FONT></B></TD> <TD> 147.1128</TD> <TD> 74.0600</TD> <TD> 130.0863</TD> <TD> 65.5468</TD> <TD>&nbsp;</TD> <TD>&nbsp;</TD> <TD><B><FONT COLOR=#0000FF>1</FONT></B></TD> </TR></TABLE><P><img SRC="http://pepbase.iab.keio.ac.jp/phospho/Arabidopsis09/spec_html/error/5043_error.gif" WIDTH=450 HEIGHT=150 ALT="Error Distribution"> <P>NCBI <B>BLAST</B> search of <A HREF="http://www.ncbi.nlm.nih.gov/blast/Blast.cgi?ALIGNMENTS=50&ALIGNMENT_VIEW=Pairwise&AUTO_FORMAT=Semiauto&CLIENT=web&DATABASE=nr&DESCRIPTIONS=100&ENTREZ_QUERY=(none)&EXPECT=20000&FORMAT_BLOCK_ON_RESPAGE=None&FORMAT_OBJECT=Alignment&FORMAT_TYPE=HTML&GAPCOSTS=9+1&I_THRESH=0.001&LAYOUT=TwoWindows&MATRIX_NAME=PAM30&NCBI_GI=on&PAGE=Proteins&PROGRAM=blastp&QUERY=WPAEVQSPK&SERVICE=plain&SET_DEFAULTS.x=32&SET_DEFAULTS.y=7&SHOW_OVERVIEW=on&WORD_SIZE=2&END_OF_HTTPGET=Yes" TARGET="_blank">WPAEVQSPK</A><BR>(Parameters: blastp, nr protein database, expect=20000, no filter, PAM30)<BR>Other BLAST <A HREF="../help/blast_help.html#web">web gateways</A><BR> <p><b>All matches to this query</b><br><p><TABLE BORDER=1 CELLSPACING=0 CELLPADDING=2> <TR BGCOLOR=#cccccc> <TH>Score</TH> <TH>Mr(calc):</TH> <TH>Delta</TH> <TH>Sequence</TH> </TR><tr><td>36.1</td><td>1120.4954</td><td>-0.0005</td><td><a href="peptide_view_all_ponl.pl?file=../data/20080402/F021717.dat&hit=1&px=1&query=1466&section=5&ave_thresh=0">WPAEVQSPK</a></td></tr><tr><td>0.3</td><td>1120.4954</td><td>-0.0005</td><td><a href="peptide_view_all_ponl.pl?file=../data/20080402/F021717.dat&hit=2&px=1&query=1466&section=5&ave_thresh=0">SNFSSFKPK</a></td></tr><tr><td>0.3</td><td>1120.4954</td><td>-0.0005</td><td><a href="peptide_view_all_ponl.pl?file=../data/20080402/F021717.dat&hit=3&px=1&query=1466&section=5&ave_thresh=0">SNFSSFKPK</a></td></tr></table><p><P><TABLE WIDTH="100%" BORDER="2" CELLSPACING="2" CELLPADDING="1"><TR><TD ALIGN="CENTER" NOWRAP><B>Mascot:</B>&nbsp;<A HREF="http://www.matrixscience.com/">http://www.matrixscience.com/</A></TD></TR></TABLE></body></html> WPAEVQSPK,@S:7_spectrum5043