with_AGI_gene
<html><body><title>OMAT1P106570</title>(↑ Click "Links", if this line appears at the beginning.)<br><H1>Other supporting information</H1><table><tr><td colspan="2" align="left"><b>Gene Model</b><br></td></tr><tr><td NOWRAP width="75"></td><td NOWRAP><img src="/dbfiles/SciNetS_ria227i/cria227s1i/cria227s1ria227u101065700000i/OMAT1P106570.gene_models.png" width="717"><br></td></tr><tr><td colspan=2 align="left"><b>Correlation Plot</b><br></td></tr><tr><td NOWRAP colspan="2" align="left"><img src="/dbfiles/SciNetS_ria227i/cria227s1i/cria227s1ria227u101065700000i/OMAT1P106570.CorrPlot.jpg" width="800"><br><br></td></tr></table><hr><b>Expression profile (Values are plotted in Log(2) values.)</b><br><img src="/dbfiles/SciNetS_ria227i/cria227s1i/cria227s1ria227u101065700000i/OMAT1P106570.F0.Expression.png"><br><hr><b>Genes with related expresssion profiles.</b><br><table border=1><tr><th colspan=7 align="left">Positively Correlated Genes</th></tr><tr><th>Gens</th><th>PCC</th><th>Definition</th><th>Overlap gene</th><th>Definition</th><th>Overlap gene(antisense)</th><th>Definition</th></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u201012750000i">OMAT2P101275</a></td><td>0.979564</td><td>-</td><td>AT2G06520</td><td>PSBX (photosystem II subunit X)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u101041400000i">OMAT1P104140</a></td><td>0.97847</td><td>-</td><td>AT1G12900</td><td>GAPA-2 (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT 2)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u101197050000i">OMAT1P119705</a></td><td>0.977004</td><td>-</td><td>AT1G76100</td><td>PETE1 (PLASTOCYANIN 1)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u100106300000i">OMAT1P010630</a></td><td>0.97523</td><td>-</td><td>AT1G30380</td><td>PSAK (photosystem I subunit K)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u401009800000i">OMAT4P100980</a></td><td>0.974182</td><td>-</td><td>AT4G02770</td><td>PSAD-1 (photosystem I subunit D-1)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u300154700000i">OMAT3P015470</a></td><td>0.973462</td><td>-</td><td>AT3G55800</td><td>SBPASE (sedoheptulose-bisphosphatase)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u101069200000i">OMAT1P106920</a></td><td>0.972094</td><td>-</td><td>AT1G21500</td><td>unknown protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u401012800000i">OMAT4P101280</a></td><td>0.971869</td><td>-</td><td>AT4G04640</td><td>ATPC1</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u101101100000i">OMAT1P110110</a></td><td>0.971797</td><td>-</td><td>AT1G32080</td><td>membrane protein, putative</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u100031700000i">OMAT1P003170</a></td><td>0.971143</td><td>-</td><td>AT1G09340</td><td>CRB (CHLOROPLAST RNA BINDING)</td><td>-</td><td>-</td></tr><tr><th colspan=7 align="left">Negatively Correlated Genes</th></tr><tr><th>Gens</th><th>PCC</th><th>Definition</th><th>Overlap gene</th><th>Definition</th><th>Overlap gene(antisense)</th><th>Definition</th></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u100149400000i">OMAT1P014940</a></td><td>-0.907727</td><td>-</td><td>AT1G53910</td><td>RAP2.12</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u100157400000i">OMAT1P015740</a></td><td>-0.893155</td><td>-</td><td>AT1G56290</td><td>CwfJ-like family protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u100065400000i">OMAT1P006540</a></td><td>-0.874366</td><td>-</td><td>AT1G17680</td><td>transcription factor-related</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u500129200000i">OMAT5P012920</a></td><td>-0.873041</td><td>-</td><td>AT5G46030</td><td>unknown protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u301053900000i">OMAT3P105390</a></td><td>-0.853213</td><td>-</td><td>AT3G15970</td><td>Ran-binding protein 1 domain-containing protein / RanBP1 domain-containing protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u200126100000i">OMAT2P012610</a></td><td>-0.8423</td><td>-</td><td>AT2G45140</td><td>PVA12 (PLANT VAP HOMOLOG 12)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u500090800000i">OMAT5P009080</a></td><td>-0.840205</td><td>-</td><td>AT5G26610,AT5G26600</td><td>[AT5G26610]D111/G-patch domain-containing protein, [AT5G26600]catalytic/ pyridoxal phosphate binding</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u500117550000i">OMAT5P011755</a></td><td>-0.836178</td><td>-</td><td>AT5G42560</td><td>abscisic acid-responsive HVA22 family protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u400138600000i">OMAT4P013860</a></td><td>-0.831662</td><td>-</td><td>AT4G39850</td><td>PXA1 (PEROXISOMAL ABC TRANSPORTER 1)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u300083900000i">OMAT3P008390</a></td><td>-0.830745</td><td>-</td><td>AT3G22290</td><td>unknown protein</td><td>-</td><td>-</td></tr></table><br><a href="/dbfiles/SciNetS_ria227i/cria227s1i/cria227s1ria227u101065700000i/OMAT1P106570-correlation.txt">Get whole results</a><br><br> <HR><b>Over-Representation Analysis Result</b><br><br><table border="1"><tr bgcolor=#FF69B4><td></td><td><i>p</i>-value</td><td> <= 5.24e-78</td><td>:20 terms with high significance</td></a></tr><tr bgcolor=#FFFACD><td>5.24e-78 < </td><td><i>p</i>-value</td><td> <= 8.76e-06</td><td> :With considering multiple testing correction;<br><i>p</i> <= 1.00e-02 / 1142</td></tr><tr bgcolor=#FFFFFF><td>8.76e-06 < </td><td><i>p</i>-value</td><td> <= 1.00e-02</td><td></td></tr></table><br><table border="1"><tr><th>Type of term (*1)</th><th>Depth of the term in ontology tree</th><th>ID/Term</th><th>Description</th><th>Number of genes</th><th>Over-Representative rate (*2)</th><th><i>p</i>-value (*3)</th><th>PosMed <i>p</i>-value (*4)<br> (Link to PosMed)</th><th>Found on gene annotation</th></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0015979</td><td>photosynthesis</td><td>47/200</td><td>58.76</td><td>1.61e-73</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0006091</td><td>generation of precursor metabolites and energy</td><td>32/200</td><td>20.00</td><td>1.56e-33</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0055114</td><td>oxidation reduction</td><td>20/200</td><td>20.03</td><td>8.10e-22</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0044237</td><td>cellular metabolic process</td><td>96/200</td><td>2.03</td><td>1.41e-14</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0009628</td><td>response to abiotic stimulus</td><td>33/200</td><td>4.45</td><td>1.12e-13</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0009416</td><td>response to light stimulus</td><td>21/200</td><td>7.30</td><td>1.93e-13</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0051186</td><td>cofactor metabolic process</td><td>16/200</td><td>10.77</td><td>2.01e-13</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0018130</td><td>heterocycle biosynthetic process</td><td>13/200</td><td>15.22</td><td>2.09e-13</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0042440</td><td>pigment metabolic process</td><td>12/200</td><td>16.91</td><td>3.64e-13</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0009314</td><td>response to radiation</td><td>21/200</td><td>7.07</td><td>3.73e-13</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT1G20340&keyword=response%20radiation">1.18E-16</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0051188</td><td>cofactor biosynthetic process</td><td>13/200</td><td>13.86</td><td>7.70e-13</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0042742</td><td>defense response to bacterium</td><td>14/200</td><td>11.76</td><td>1.37e-12</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0009617</td><td>response to bacterium</td><td>14/200</td><td>9.06</td><td>5.71e-11</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0005996</td><td>monosaccharide metabolic process</td><td>11/200</td><td>11.95</td><td>1.69e-10</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0009409</td><td>response to cold</td><td>13/200</td><td>8.35</td><td>6.93e-10</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0044271</td><td>cellular nitrogen compound biosynthetic process</td><td>16/200</td><td>6.05</td><td>1.72e-09</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0046483</td><td>heterocycle metabolic process</td><td>16/200</td><td>5.91</td><td>2.41e-09</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0051707</td><td>response to other organism</td><td>17/200</td><td>5.07</td><td>9.15e-09</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0009266</td><td>response to temperature stimulus</td><td>14/200</td><td>6.14</td><td>1.17e-08</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0009607</td><td>response to biotic stimulus</td><td>17/200</td><td>4.70</td><td>2.92e-08</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0044282</td><td>small molecule catabolic process</td><td>11/200</td><td>7.44</td><td>3.68e-08</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0006066</td><td>alcohol metabolic process</td><td>11/200</td><td>7.06</td><td>6.47e-08</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0006952</td><td>defense response</td><td>18/200</td><td>3.95</td><td>1.87e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0006950</td><td>response to stress</td><td>31/200</td><td>2.50</td><td>7.83e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0044281</td><td>small molecule metabolic process</td><td>24/200</td><td>2.67</td><td>3.96e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0044262</td><td>cellular carbohydrate metabolic process</td><td>12/200</td><td>3.88</td><td>1.59e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0005975</td><td>carbohydrate metabolic process</td><td>13/200</td><td>2.50</td><td>8.12e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0043436</td><td>oxoacid metabolic process</td><td>11/200</td><td>2.50</td><td>1.69e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0006082</td><td>organic acid metabolic process</td><td>11/200</td><td>2.49</td><td>1.73e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0042180</td><td>cellular ketone metabolic process</td><td>11/200</td><td>2.45</td><td>1.98e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0009056</td><td>catabolic process</td><td>11/200</td><td>2.31</td><td>3.25e-03</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>C</td><td>4</td><td>GO:0044435</td><td>plastid part</td><td>140/200</td><td>24.61</td><td>1.67e-172</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>5</td><td>GO:0044434</td><td>chloroplast part</td><td>139/200</td><td>25.09</td><td>2.85e-172</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>4</td><td>GO:0009579</td><td>thylakoid</td><td>115/200</td><td>46.19</td><td>7.68e-172</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>4</td><td>GO:0044436</td><td>thylakoid part</td><td>106/200</td><td>51.39</td><td>8.02e-163</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>5</td><td>GO:0031976</td><td>plastid thylakoid</td><td>103/200</td><td>51.74</td><td>3.64e-158</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>4</td><td>GO:0031984</td><td>organelle subcompartment</td><td>103/200</td><td>51.43</td><td>7.66e-158</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>4</td><td>GO:0034357</td><td>photosynthetic membrane</td><td>100/200</td><td>54.52</td><td>6.58e-156</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>C</td><td>5</td><td>GO:0055035</td><td>plastid thylakoid membrane</td><td>98/200</td><td>56.58</td><td>1.79e-154</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>C</td><td>5</td><td>GO:0042651</td><td>thylakoid membrane</td><td>99/200</td><td>54.69</td><td>2.18e-154</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>C</td><td>5</td><td>GO:0009536</td><td>plastid</td><td>171/200</td><td>9.26</td><td>1.26e-147</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT1G20340&keyword=plastid">3.64E-21</a></td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>3</td><td>GO:0044446</td><td>intracellular organelle part</td><td>140/200</td><td>9.76</td><td>4.02e-114</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>3</td><td>GO:0044422</td><td>organelle part</td><td>140/200</td><td>9.76</td><td>4.52e-114</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>4</td><td>GO:0044444</td><td>cytoplasmic part</td><td>173/200</td><td>4.98</td><td>1.41e-103</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>4</td><td>GO:0005737</td><td>cytoplasm</td><td>173/200</td><td>4.62</td><td>5.52e-98</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>4</td><td>GO:0043231</td><td>intracellular membrane-bounded organelle</td><td>173/200</td><td>3.94</td><td>3.32e-86</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>3</td><td>GO:0043227</td><td>membrane-bounded organelle</td><td>173/200</td><td>3.94</td><td>3.39e-86</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>3</td><td>GO:0043229</td><td>intracellular organelle</td><td>173/200</td><td>3.75</td><td>1.50e-82</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>3</td><td>GO:0044424</td><td>intracellular part</td><td>175/200</td><td>3.43</td><td>5.24e-78</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0005622</td><td>intracellular</td><td>175/200</td><td>3.29</td><td>8.20e-75</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>5</td><td>GO:0009526</td><td>plastid envelope</td><td>64/200</td><td>23.29</td><td>6.13e-71</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>4</td><td>GO:0031967</td><td>organelle envelope</td><td>64/200</td><td>15.36</td><td>7.15e-59</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0031975</td><td>envelope</td><td>64/200</td><td>15.36</td><td>7.15e-59</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>5</td><td>GO:0009532</td><td>plastid stroma</td><td>51/200</td><td>20.63</td><td>1.71e-53</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0016020</td><td>membrane</td><td>119/200</td><td>4.34</td><td>1.14e-52</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0044464</td><td>cell part</td><td>185/200</td><td>2.02</td><td>9.51e-47</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0043234</td><td>protein complex</td><td>49/200</td><td>7.49</td><td>7.67e-30</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT1G20340&keyword=protein%20complex">5.61E-16</a></td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0048046</td><td>apoplast</td><td>27/200</td><td>13.69</td><td>5.63e-24</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0044425</td><td>membrane part</td><td>38/200</td><td>4.80</td><td>1.22e-16</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>4</td><td>GO:0005840</td><td>ribosome</td><td>10/200</td><td>3.90</td><td>5.98e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>3</td><td>GO:0030529</td><td>ribonucleoprotein complex</td><td>10/200</td><td>2.87</td><td>8.31e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>3</td><td>GO:0043228</td><td>non-membrane-bounded organelle</td><td>13/200</td><td>2.18</td><td>2.83e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>4</td><td>GO:0043232</td><td>intracellular non-membrane-bounded organelle</td><td>13/200</td><td>2.18</td><td>2.83e-03</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FFFACD><td>M</td><td>3</td><td>GO:0046906</td><td>tetrapyrrole binding</td><td>12/200</td><td>6.29</td><td>7.54e-08</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>M</td><td>3</td><td>GO:0016491</td><td>oxidoreductase activity</td><td>24/200</td><td>2.85</td><td>1.29e-06</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0020030</td><td>cotyledon</td><td>192/200</td><td>2.62</td><td>3.79e-74</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0020038</td><td>petiole</td><td>193/200</td><td>2.54</td><td>7.98e-73</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT1G20340&keyword=petiole">8.07E-19</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0000013</td><td>cauline leaf</td><td>191/200</td><td>2.47</td><td>2.33e-68</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0020039</td><td>leaf lamina</td><td>193/200</td><td>2.34</td><td>3.35e-66</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009013</td><td>meristem</td><td>191/200</td><td>2.38</td><td>3.87e-65</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0000230</td><td>inflorescence meristem</td><td>189/200</td><td>2.43</td><td>7.20e-65</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009047</td><td>stem</td><td>192/200</td><td>2.28</td><td>1.10e-62</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009028</td><td>microsporophyll</td><td>191/200</td><td>2.28</td><td>1.20e-61</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009032</td><td>petal</td><td>192/200</td><td>2.19</td><td>1.50e-59</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0000037</td><td>shoot apex</td><td>191/200</td><td>2.22</td><td>1.50e-59</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0008037</td><td>seedling</td><td>192/200</td><td>2.18</td><td>5.73e-59</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009052</td><td>pedicel</td><td>187/200</td><td>2.30</td><td>1.96e-58</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009025</td><td>leaf</td><td>193/200</td><td>2.10</td><td>3.88e-57</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009026</td><td>sporophyll</td><td>191/200</td><td>2.12</td><td>6.81e-56</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009027</td><td>megasporophyll</td><td>186/200</td><td>2.22</td><td>1.32e-54</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009031</td><td>sepal</td><td>191/200</td><td>2.07</td><td>8.58e-54</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0008034</td><td>leaf whorl</td><td>191/200</td><td>2.03</td><td>4.04e-52</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0008033</td><td>phyllome whorl</td><td>191/200</td><td>2.03</td><td>4.04e-52</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009009</td><td>embryo</td><td>192/200</td><td>1.99</td><td>1.42e-51</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009010</td><td>seed</td><td>192/200</td><td>1.96</td><td>1.46e-50</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009001</td><td>fruit</td><td>192/200</td><td>1.95</td><td>3.87e-50</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0006342</td><td>infructescence</td><td>192/200</td><td>1.95</td><td>3.87e-50</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0006001</td><td>phyllome</td><td>193/200</td><td>1.88</td><td>3.69e-48</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009046</td><td>flower</td><td>192/200</td><td>1.85</td><td>1.45e-45</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009049</td><td>inflorescence</td><td>192/200</td><td>1.83</td><td>4.43e-45</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009006</td><td>shoot</td><td>193/200</td><td>1.78</td><td>1.72e-43</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0000293</td><td>guard cell</td><td>74/200</td><td>6.88</td><td>3.49e-43</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0000351</td><td>guard mother cell</td><td>74/200</td><td>6.85</td><td>4.76e-43</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0000070</td><td>meristemoid</td><td>74/200</td><td>6.84</td><td>5.35e-43</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0006016</td><td>leaf epidermis</td><td>74/200</td><td>6.65</td><td>3.45e-42</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0006035</td><td>shoot epidermis</td><td>74/200</td><td>6.61</td><td>5.60e-42</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0000349</td><td>epidermal initial</td><td>74/200</td><td>6.56</td><td>9.07e-42</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0004011</td><td>initial cell</td><td>74/200</td><td>6.52</td><td>1.41e-41</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0004010</td><td>meristematic cell</td><td>74/200</td><td>6.51</td><td>1.57e-41</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0004013</td><td>epidermal cell</td><td>75/200</td><td>6.29</td><td>4.32e-41</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0005679</td><td>epidermis</td><td>75/200</td><td>6.06</td><td>5.90e-40</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009014</td><td>dermal tissue</td><td>75/200</td><td>6.05</td><td>6.10e-40</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0020091</td><td>male gametophyte</td><td>168/200</td><td>2.03</td><td>2.47e-36</td><td>-</td><td>yes</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0001054</td><td>4 leaf senescence stage</td><td>191/200</td><td>2.48</td><td>1.02e-68</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0001050</td><td>leaf development stages</td><td>191/200</td><td>2.48</td><td>1.13e-68</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0001185</td><td>C globular stage</td><td>190/200</td><td>2.32</td><td>6.29e-62</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0007133</td><td>leaf production</td><td>191/200</td><td>2.27</td><td>2.16e-61</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007112</td><td>1 main shoot growth</td><td>191/200</td><td>2.27</td><td>2.25e-61</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0007134</td><td>A vegetative growth</td><td>191/200</td><td>2.25</td><td>8.10e-61</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0001081</td><td>F mature embryo stage</td><td>186/200</td><td>2.34</td><td>8.21e-59</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0004507</td><td>D bilateral stage</td><td>187/200</td><td>2.27</td><td>2.06e-57</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0001078</td><td>E expanded cotyledon stage</td><td>187/200</td><td>2.25</td><td>8.21e-57</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007631</td><td>embryo development stages</td><td>190/200</td><td>2.11</td><td>1.99e-54</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0001170</td><td>seed development stages</td><td>190/200</td><td>2.10</td><td>4.44e-54</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007616</td><td>4 anthesis</td><td>191/200</td><td>1.97</td><td>7.26e-50</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0007604</td><td>corolla developmental stages</td><td>191/200</td><td>1.93</td><td>2.00e-48</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007600</td><td>3 floral organ development stages</td><td>191/200</td><td>1.87</td><td>6.88e-46</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0007615</td><td>flower development stages</td><td>191/200</td><td>1.82</td><td>1.13e-43</td><td>-</td><td>yes</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>KW</td><td>0</td><td>thylakoid</td><td>-</td><td>82/200</td><td>38.52</td><td>1.11e-111</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>KW</td><td>0</td><td>chloroplast</td><td>-</td><td>143/200</td><td>8.10</td><td>9.75e-106</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT1G20340&keyword=chloroplast">5.00E-35</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>photosystem</td><td>-</td><td>43/200</td><td>71.50</td><td>4.53e-72</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>components</td><td>-</td><td>49/200</td><td>30.18</td><td>4.17e-60</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT1G20340&keyword=components">5.72E-16</a></td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>envelope</td><td>-</td><td>31/200</td><td>13.56</td><td>4.03e-27</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>light</td><td>-</td><td>32/200</td><td>11.98</td><td>3.34e-26</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT1G20340&keyword=light">5.84E-16</a></td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>subunit</td><td>-</td><td>43/200</td><td>5.87</td><td>5.08e-22</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>membrane</td><td>-</td><td>80/200</td><td>3.01</td><td>1.01e-21</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>stroma</td><td>-</td><td>23/200</td><td>12.34</td><td>1.12e-19</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>complex</td><td>-</td><td>42/200</td><td>4.96</td><td>8.52e-19</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT1G20340&keyword=complex">1.40E-15</a></td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>encodes</td><td>-</td><td>67/200</td><td>2.62</td><td>7.42e-15</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>electron</td><td>-</td><td>24/200</td><td>6.74</td><td>2.76e-14</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT1G20340&keyword=electron">0</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>dehydrogenase</td><td>-</td><td>20/200</td><td>6.90</td><td>2.00e-12</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>ipr016040</td><td>-</td><td>17/200</td><td>7.90</td><td>7.76e-12</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>response</td><td>-</td><td>49/200</td><td>2.73</td><td>1.72e-11</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT1G20340&keyword=response">3.49E-15</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>bacterium</td><td>-</td><td>11/200</td><td>11.58</td><td>2.46e-10</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>catalytic</td><td>-</td><td>33/200</td><td>3.25</td><td>5.85e-10</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>plastid</td><td>-</td><td>11/200</td><td>7.29</td><td>4.59e-08</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT1G20340&keyword=plastid">3.64E-21</a></td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>reductase</td><td>-</td><td>14/200</td><td>5.14</td><td>1.21e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>ipr012336</td><td>-</td><td>10/200</td><td>7.14</td><td>1.92e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>reduction</td><td>-</td><td>10/200</td><td>7.05</td><td>2.18e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>thioredoxin</td><td>-</td><td>10/200</td><td>6.81</td><td>3.04e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>enzyme</td><td>-</td><td>14/200</td><td>4.15</td><td>1.77e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>phosphate</td><td>-</td><td>13/200</td><td>4.29</td><td>2.55e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>defense</td><td>-</td><td>14/200</td><td>4.01</td><td>2.66e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>transport</td><td>-</td><td>25/200</td><td>2.57</td><td>5.16e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>biosynthetic</td><td>-</td><td>20/200</td><td>2.80</td><td>1.10e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>mutant</td><td>-</td><td>10/200</td><td>4.59</td><td>1.36e-05</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT1G20340&keyword=mutant">5.88E-16</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>pathway</td><td>-</td><td>11/200</td><td>4.09</td><td>1.89e-05</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT1G20340&keyword=pathway">8.34E-16</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>process</td><td>-</td><td>36/200</td><td>1.76</td><td>2.84e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>oxidoreductase</td><td>-</td><td>12/200</td><td>2.57</td><td>8.91e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>stress</td><td>-</td><td>11/200</td><td>2.34</td><td>2.84e-03</td><td>-</td><td>no</td></tr></table><table><tr><td valign=top>(*1)</td><td>[B]:Biological process(Gene ontology), [C]:Cellular component(Gene ontology), [M]:Molecular function(Gene ontology), [PS]:Plant Structure(Plant ontology), [PG]:Growth and developmental stages(Plant ontology), [KW]:words found in gene description.</td></tr><tr><td valign=top>(*2)</td><td>([# of genes with the term] / [# of sampling (200)]) / ([# of genes with the term among whole genes] / [# of whole genes]) </td></tr><tr><td valign=top>(*3)</td><td>P-values were calculated on hypergeometric distribution in which we found <i>n</i> genes with a annotation term during 200 highly correlated genes, while we had <i>N</i> genes with the term in the whole genes.</td></tr><tr><td valign=top>(*4)</td><td><a href="http://omicspace.riken.jp/PosMed-plus/">PosMed</a> is a system which serve a p-values showing a relationship between the gene and the annotation term based on literature information and Gene-Gene interaction suchas co-expression or protein-protein interactions.</td></tr></table><hr><a href="/db/SciNetS_ria227i/cria227s904i">Top Page</a></body></html>
0.84634799999999998921
OMAT1P106570