with_AGI_gene
0.88900900000000004919
OMAT1P119040
<html><body><title>OMAT1P119040</title>(↑ Click "Links", if this line appears at the beginning.)<br><H1>Other supporting information</H1><table><tr><td colspan="2" align="left"><b>Gene Model</b><br></td></tr><tr><td NOWRAP width="75"></td><td NOWRAP><img src="/dbfiles/SciNetS_ria227i/cria227s1i/cria227s1ria227u101190400000i/OMAT1P119040.gene_models.png" width="717"><br></td></tr><tr><td colspan=2 align="left"><b>Correlation Plot</b><br></td></tr><tr><td NOWRAP colspan="2" align="left"><img src="/dbfiles/SciNetS_ria227i/cria227s1i/cria227s1ria227u101190400000i/OMAT1P119040.CorrPlot.jpg" width="800"><br><br></td></tr></table><hr><b>Expression profile (Values are plotted in Log(2) values.)</b><br><img src="/dbfiles/SciNetS_ria227i/cria227s1i/cria227s1ria227u101190400000i/OMAT1P119040.F0.Expression.png"><br><hr><b>Genes with related expresssion profiles.</b><br><table border=1><tr><th colspan=7 align="left">Positively Correlated Genes</th></tr><tr><th>Gens</th><th>PCC</th><th>Definition</th><th>Overlap gene</th><th>Definition</th><th>Overlap gene(antisense)</th><th>Definition</th></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u401090100000i">OMAT4P109010</a></td><td>0.982288</td><td>-</td><td>AT4G31810</td><td>enoyl-CoA hydratase/isomerase family protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u100146000000i">OMAT1P014600</a></td><td>0.981387</td><td>-</td><td>AT1G52930</td><td>brix domain-containing protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u200035900000i">OMAT2P003590</a></td><td>0.980807</td><td>-</td><td>AT2G20490</td><td>NOP10</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u101209900000i">OMAT1P120990</a></td><td>0.978649</td><td>-</td><td>AtsnoR85</td><td>AtsnoR85</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u500121700000i">OMAT5P012170</a></td><td>0.978524</td><td>-</td><td>AT5G43970</td><td>TOM22-V (TRANSLOCASE OF OUTER MEMBRANE 22-V)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u101054100000i">OMAT1P105410</a></td><td>0.976754</td><td>-</td><td>AT1G16280</td><td>DEAD/DEAH box helicase, putative</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u501022400000i">OMAT5P102240</a></td><td>0.976016</td><td>-</td><td>AT5G08180,AtsnoR100</td><td>[AT5G08180]ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein, [AtsnoR100]AtsnoR100</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u101209400000i">OMAT1P120940</a></td><td>0.975867</td><td>-</td><td>AT1G79390</td><td>unknown protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u100141700000i">OMAT1P014170</a></td><td>0.975076</td><td>-</td><td>AT1G51380</td><td>eukaryotic translation initiation factor 4A, putative / eIF-4A, putative</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u200098600000i">OMAT2P009860</a></td><td>0.974634</td><td>-</td><td>AT2G37990</td><td>ribosome biogenesis regulatory protein (RRS1) family protein</td><td>-</td><td>-</td></tr><tr><th colspan=7 align="left">Negatively Correlated Genes</th></tr><tr><th>Gens</th><th>PCC</th><th>Definition</th><th>Overlap gene</th><th>Definition</th><th>Overlap gene(antisense)</th><th>Definition</th></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u300006600000i">OMAT3P000660</a></td><td>-0.711052</td><td>-</td><td>AT3G02470,AT3G02468</td><td>[AT3G02470]SAMDC (S-ADENOSYLMETHIONINE DECARBOXYLASE), [AT3G02468]CPuORF9 (Conserved peptide upstream open reading frame 9)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u101084600000i">OMAT1P108460</a></td><td>-0.681752</td><td>-</td><td>AT1G27100</td><td>FUNCTIONS IN: molecular_function unknown</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u401070100000i">OMAT4P107010</a></td><td>-0.679667</td><td>-</td><td>AT4G25650</td><td>ACD1-LIKE (ACD1-LIKE)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u200021800000i">OMAT2P002180</a></td><td>-0.678108</td><td>-</td><td>AT2G16050</td><td>FUNCTIONS IN: molecular_function unknown</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u501004300000i">OMAT5P100430</a></td><td>-0.668947</td><td>-</td><td>AT5G02380</td><td>MT2B (METALLOTHIONEIN 2B)</td><td>AT5G02370</td><td>kinesin motor protein-related</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u501088000000i">OMAT5P108800</a></td><td>-0.666974</td><td>-</td><td>AT5G36160</td><td>aminotransferase-related</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u201083300000i">OMAT2P108330</a></td><td>-0.664307</td><td>-</td><td>AT2G36490</td><td>DML1 (DEMETER-LIKE 1)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u100235400000i">OMAT1P023540</a></td><td>-0.664099</td><td>-</td><td>AT1G79040</td><td>PSBR (photosystem II subunit R)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u401042300000i">OMAT4P104230</a></td><td>-0.661413</td><td>-</td><td>AT4G17170</td><td>RABB1C (ARABIDOPSIS RAB GTPASE HOMOLOG B1C)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u100104800000i">OMAT1P010480</a></td><td>-0.657865</td><td>-</td><td>AT1G29930</td><td>CAB1 (CHLOROPHYLL A/B BINDING PROTEIN 1)</td><td>-</td><td>-</td></tr></table><br><a href="/dbfiles/SciNetS_ria227i/cria227s1i/cria227s1ria227u101190400000i/OMAT1P119040-correlation.txt">Get whole results</a><br><br> <HR><b>Over-Representation Analysis Result</b><br><br><table border="1"><tr bgcolor=#FF69B4><td></td><td><i>p</i>-value</td><td> <= 3.46e-12</td><td>:20 terms with high significance</td></a></tr><tr bgcolor=#FFFACD><td>3.46e-12 < </td><td><i>p</i>-value</td><td> <= 8.76e-06</td><td> :With considering multiple testing correction;<br><i>p</i> <= 1.00e-02 / 1142</td></tr><tr bgcolor=#FFFFFF><td>8.76e-06 < </td><td><i>p</i>-value</td><td> <= 1.00e-02</td><td></td></tr></table><br><table border="1"><tr><th>Type of term (*1)</th><th>Depth of the term in ontology tree</th><th>ID/Term</th><th>Description</th><th>Number of genes</th><th>Over-Representative rate (*2)</th><th><i>p</i>-value (*3)</th><th>PosMed <i>p</i>-value (*4)<br> (Link to PosMed)</th><th>Found on gene annotation</th></tr><tr bgcolor=#FF69B4><td>B</td><td>4</td><td>GO:0042254</td><td>ribosome biogenesis</td><td>23/200</td><td>17.95</td><td>1.46e-23</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>B</td><td>3</td><td>GO:0022613</td><td>ribonucleoprotein complex biogenesis</td><td>23/200</td><td>17.38</td><td>3.20e-23</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>B</td><td>5</td><td>GO:0006364</td><td>rRNA processing</td><td>14/200</td><td>22.38</td><td>8.54e-17</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>B</td><td>5</td><td>GO:0006396</td><td>RNA processing</td><td>21/200</td><td>9.49</td><td>9.33e-16</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>B</td><td>5</td><td>GO:0009451</td><td>RNA modification</td><td>13/200</td><td>17.16</td><td>3.91e-14</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0010467</td><td>gene expression</td><td>48/200</td><td>2.36</td><td>4.32e-09</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT1G74270&keyword=gene%20expression">1.29E-17</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0006412</td><td>translation</td><td>23/200</td><td>3.17</td><td>3.11e-07</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0016070</td><td>RNA metabolic process</td><td>25/200</td><td>2.94</td><td>4.36e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0090304</td><td>nucleic acid metabolic process</td><td>28/200</td><td>1.86</td><td>4.99e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0044260</td><td>cellular macromolecule metabolic process</td><td>52/200</td><td>1.48</td><td>1.10e-03</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0006139</td><td>nucleobase, nucleoside, nucleotide and nucleic acid metabolic process</td><td>29/200</td><td>1.72</td><td>1.47e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0043170</td><td>macromolecule metabolic process</td><td>53/200</td><td>1.37</td><td>5.16e-03</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0034641</td><td>cellular nitrogen compound metabolic process</td><td>30/200</td><td>1.54</td><td>6.35e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0006807</td><td>nitrogen compound metabolic process</td><td>30/200</td><td>1.51</td><td>8.35e-03</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>C</td><td>3</td><td>GO:0030529</td><td>ribonucleoprotein complex</td><td>31/200</td><td>8.89</td><td>1.80e-21</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>3</td><td>GO:0043228</td><td>non-membrane-bounded organelle</td><td>34/200</td><td>5.70</td><td>2.85e-17</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>4</td><td>GO:0043232</td><td>intracellular non-membrane-bounded organelle</td><td>34/200</td><td>5.70</td><td>2.85e-17</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>4</td><td>GO:0070013</td><td>intracellular organelle lumen</td><td>23/200</td><td>8.48</td><td>5.85e-16</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>C</td><td>3</td><td>GO:0043233</td><td>organelle lumen</td><td>23/200</td><td>8.46</td><td>6.15e-16</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>C</td><td>5</td><td>GO:0005730</td><td>nucleolus</td><td>19/200</td><td>11.08</td><td>9.49e-16</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>C</td><td>5</td><td>GO:0031981</td><td>nuclear lumen</td><td>20/200</td><td>8.27</td><td>6.12e-14</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>C</td><td>3</td><td>GO:0005622</td><td>intracellular</td><td>101/200</td><td>1.90</td><td>1.70e-13</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>3</td><td>GO:0044424</td><td>intracellular part</td><td>98/200</td><td>1.92</td><td>2.34e-13</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>4</td><td>GO:0044428</td><td>nuclear part</td><td>21/200</td><td>6.31</td><td>3.46e-12</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0044446</td><td>intracellular organelle part</td><td>42/200</td><td>2.93</td><td>6.56e-11</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0044422</td><td>organelle part</td><td>42/200</td><td>2.93</td><td>6.74e-11</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>4</td><td>GO:0005840</td><td>ribosome</td><td>17/200</td><td>6.64</td><td>1.34e-10</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0043229</td><td>intracellular organelle</td><td>84/200</td><td>1.82</td><td>8.41e-10</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>4</td><td>GO:0033279</td><td>ribosomal subunit</td><td>12/200</td><td>7.39</td><td>1.14e-08</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>5</td><td>GO:0005739</td><td>mitochondrion</td><td>21/200</td><td>3.28</td><td>5.32e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>4</td><td>GO:0043231</td><td>intracellular membrane-bounded organelle</td><td>73/200</td><td>1.66</td><td>9.05e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0043227</td><td>membrane-bounded organelle</td><td>73/200</td><td>1.66</td><td>9.10e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>5</td><td>GO:0022626</td><td>cytosolic ribosome</td><td>10/200</td><td>5.43</td><td>2.78e-06</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>4</td><td>GO:0005737</td><td>cytoplasm</td><td>63/200</td><td>1.68</td><td>4.62e-06</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>5</td><td>GO:0005634</td><td>nucleus</td><td>34/200</td><td>2.17</td><td>5.61e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>4</td><td>GO:0044444</td><td>cytoplasmic part</td><td>58/200</td><td>1.67</td><td>1.57e-05</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>5</td><td>GO:0005829</td><td>cytosol</td><td>10/200</td><td>2.42</td><td>3.16e-03</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>3</td><td>GO:0044464</td><td>cell part</td><td>110/200</td><td>1.20</td><td>3.47e-03</td><td>-</td><td>yes</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FFFACD><td>M</td><td>3</td><td>GO:0003735</td><td>structural constituent of ribosome</td><td>17/200</td><td>7.85</td><td>8.51e-12</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>M</td><td>4</td><td>GO:0003723</td><td>RNA binding</td><td>20/200</td><td>2.88</td><td>7.12e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>3</td><td>GO:0003676</td><td>nucleic acid binding</td><td>40/200</td><td>1.69</td><td>3.17e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>3</td><td>GO:0000166</td><td>nucleotide binding</td><td>23/200</td><td>1.74</td><td>3.40e-03</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>PS</td><td>5</td><td>PO:0020038</td><td>petiole</td><td>126/200</td><td>1.66</td><td>2.60e-13</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0000037</td><td>shoot apex</td><td>133/200</td><td>1.55</td><td>6.18e-12</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009005</td><td>root</td><td>134/200</td><td>1.49</td><td>1.03e-10</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009052</td><td>pedicel</td><td>125/200</td><td>1.54</td><td>1.39e-10</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0020039</td><td>leaf lamina</td><td>124/200</td><td>1.50</td><td>9.67e-10</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009028</td><td>microsporophyll</td><td>124/200</td><td>1.48</td><td>3.41e-09</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009025</td><td>leaf</td><td>132/200</td><td>1.44</td><td>3.61e-09</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0000013</td><td>cauline leaf</td><td>116/200</td><td>1.50</td><td>9.38e-09</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009026</td><td>sporophyll</td><td>126/200</td><td>1.40</td><td>1.01e-07</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009047</td><td>stem</td><td>120/200</td><td>1.42</td><td>1.31e-07</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009032</td><td>petal</td><td>123/200</td><td>1.40</td><td>1.66e-07</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009027</td><td>megasporophyll</td><td>119/200</td><td>1.42</td><td>2.04e-07</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0008037</td><td>seedling</td><td>123/200</td><td>1.39</td><td>2.65e-07</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009009</td><td>embryo</td><td>131/200</td><td>1.36</td><td>3.18e-07</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009031</td><td>sepal</td><td>126/200</td><td>1.36</td><td>5.88e-07</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009010</td><td>seed</td><td>131/200</td><td>1.34</td><td>7.58e-07</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009013</td><td>meristem</td><td>113/200</td><td>1.41</td><td>1.08e-06</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009001</td><td>fruit</td><td>131/200</td><td>1.33</td><td>1.08e-06</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0006342</td><td>infructescence</td><td>131/200</td><td>1.33</td><td>1.08e-06</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0020030</td><td>cotyledon</td><td>105/200</td><td>1.43</td><td>1.84e-06</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0006001</td><td>phyllome</td><td>134/200</td><td>1.31</td><td>2.30e-06</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0000230</td><td>inflorescence meristem</td><td>109/200</td><td>1.40</td><td>2.55e-06</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0008034</td><td>leaf whorl</td><td>125/200</td><td>1.33</td><td>4.47e-06</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0008033</td><td>phyllome whorl</td><td>125/200</td><td>1.33</td><td>4.47e-06</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009006</td><td>shoot</td><td>138/200</td><td>1.27</td><td>7.52e-06</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>5</td><td>PO:0009046</td><td>flower</td><td>133/200</td><td>1.28</td><td>1.18e-05</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>4</td><td>PO:0009049</td><td>inflorescence</td><td>133/200</td><td>1.27</td><td>1.74e-05</td><td>-</td><td>yes</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>PG</td><td>5</td><td>PO:0001081</td><td>F mature embryo stage</td><td>129/200</td><td>1.62</td><td>4.55e-13</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0004507</td><td>D bilateral stage</td><td>129/200</td><td>1.57</td><td>8.50e-12</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0001078</td><td>E expanded cotyledon stage</td><td>129/200</td><td>1.55</td><td>1.59e-11</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0007134</td><td>A vegetative growth</td><td>127/200</td><td>1.50</td><td>5.26e-10</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0001185</td><td>C globular stage</td><td>124/200</td><td>1.51</td><td>6.90e-10</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0007133</td><td>leaf production</td><td>125/200</td><td>1.49</td><td>1.82e-09</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007112</td><td>1 main shoot growth</td><td>125/200</td><td>1.49</td><td>1.84e-09</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007631</td><td>embryo development stages</td><td>130/200</td><td>1.44</td><td>4.04e-09</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0001170</td><td>seed development stages</td><td>130/200</td><td>1.44</td><td>5.62e-09</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0001054</td><td>4 leaf senescence stage</td><td>116/200</td><td>1.51</td><td>7.01e-09</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0001050</td><td>leaf development stages</td><td>116/200</td><td>1.51</td><td>7.27e-09</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0007604</td><td>corolla developmental stages</td><td>132/200</td><td>1.34</td><td>6.86e-07</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007600</td><td>3 floral organ development stages</td><td>133/200</td><td>1.31</td><td>2.95e-06</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007616</td><td>4 anthesis</td><td>128/200</td><td>1.32</td><td>3.47e-06</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>PG</td><td>3</td><td>PO:0007615</td><td>flower development stages</td><td>133/200</td><td>1.27</td><td>1.82e-05</td><td>-</td><td>yes</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>KW</td><td>0</td><td>ribosomal</td><td>-</td><td>26/200</td><td>8.61</td><td>5.93e-18</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT1G74270&keyword=ribosomal">0</a></td><td>yes</td></tr><tr bgcolor=#FF69B4><td>KW</td><td>0</td><td>nucleolus</td><td>-</td><td>18/200</td><td>13.24</td><td>1.82e-16</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>KW</td><td>0</td><td>ribosome</td><td>-</td><td>23/200</td><td>8.71</td><td>3.20e-16</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>translation</td><td>-</td><td>25/200</td><td>5.04</td><td>6.21e-12</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>constituent</td><td>-</td><td>17/200</td><td>6.07</td><td>5.62e-10</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>eukaryotic</td><td>-</td><td>14/200</td><td>7.12</td><td>1.61e-09</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>processing</td><td>-</td><td>12/200</td><td>8.45</td><td>2.28e-09</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>structural</td><td>-</td><td>17/200</td><td>4.85</td><td>1.84e-08</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>ipr017986</td><td>-</td><td>10/200</td><td>7.46</td><td>1.23e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>ipr001680</td><td>-</td><td>10/200</td><td>6.73</td><td>3.43e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>ipr015943</td><td>-</td><td>10/200</td><td>6.65</td><td>3.87e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>complex</td><td>-</td><td>25/200</td><td>2.95</td><td>4.02e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>ipr011046</td><td>-</td><td>10/200</td><td>6.44</td><td>5.29e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>mitochondrion</td><td>-</td><td>18/200</td><td>3.28</td><td>2.97e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>cytosolic</td><td>-</td><td>10/200</td><td>4.67</td><td>1.16e-05</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>subunit</td><td>-</td><td>20/200</td><td>2.73</td><td>1.62e-05</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>mitochondrial</td><td>-</td><td>10/200</td><td>4.43</td><td>1.88e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>nucleotide</td><td>-</td><td>18/200</td><td>2.83</td><td>2.38e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>motif</td><td>-</td><td>15/200</td><td>3.09</td><td>3.41e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>intracellular</td><td>-</td><td>12/200</td><td>2.33</td><td>2.19e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>ubiquitin</td><td>-</td><td>10/200</td><td>2.23</td><td>5.81e-03</td><td>-</td><td>no</td></tr></table><table><tr><td valign=top>(*1)</td><td>[B]:Biological process(Gene ontology), [C]:Cellular component(Gene ontology), [M]:Molecular function(Gene ontology), [PS]:Plant Structure(Plant ontology), [PG]:Growth and developmental stages(Plant ontology), [KW]:words found in gene description.</td></tr><tr><td valign=top>(*2)</td><td>([# of genes with the term] / [# of sampling (200)]) / ([# of genes with the term among whole genes] / [# of whole genes]) </td></tr><tr><td valign=top>(*3)</td><td>P-values were calculated on hypergeometric distribution in which we found <i>n</i> genes with a annotation term during 200 highly correlated genes, while we had <i>N</i> genes with the term in the whole genes.</td></tr><tr><td valign=top>(*4)</td><td><a href="http://omicspace.riken.jp/PosMed-plus/">PosMed</a> is a system which serve a p-values showing a relationship between the gene and the annotation term based on literature information and Gene-Gene interaction suchas co-expression or protein-protein interactions.</td></tr></table><hr><a href="/db/SciNetS_ria227i/cria227s904i">Top Page</a></body></html>