with_AGI_gene
OMAT2P112500
0.69047700000000000742
<html><body><title>OMAT2P112500</title>(↑ Click "Links", if this line appears at the beginning.)<br><H1>Other supporting information</H1><table><tr><td colspan="2" align="left"><b>Gene Model</b><br></td></tr><tr><td NOWRAP width="75"></td><td NOWRAP><img src="/dbfiles/SciNetS_ria227i/cria227s1i/cria227s1ria227u201125000000i/OMAT2P112500.gene_models.png" width="717"><br></td></tr><tr><td colspan=2 align="left"><b>Correlation Plot</b><br></td></tr><tr><td NOWRAP colspan="2" align="left"><img src="/dbfiles/SciNetS_ria227i/cria227s1i/cria227s1ria227u201125000000i/OMAT2P112500.CorrPlot.jpg" width="800"><br><br></td></tr></table><hr><b>Expression profile (Values are plotted in Log(2) values.)</b><br><img src="/dbfiles/SciNetS_ria227i/cria227s1i/cria227s1ria227u201125000000i/OMAT2P112500.F0.Expression.png"><br><hr><b>Genes with related expresssion profiles.</b><br><table border=1><tr><th colspan=7 align="left">Positively Correlated Genes</th></tr><tr><th>Gens</th><th>PCC</th><th>Definition</th><th>Overlap gene</th><th>Definition</th><th>Overlap gene(antisense)</th><th>Definition</th></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u301043600000i">OMAT3P104360</a></td><td>0.982268</td><td>-</td><td>AT3G13150</td><td>pentatricopeptide (PPR) repeat-containing protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u101060400000i">OMAT1P106040</a></td><td>0.968818</td><td>-</td><td>AT1G18850</td><td>unknown protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u401015300000i">OMAT4P101530</a></td><td>0.966804</td><td>-</td><td>AT4G05410</td><td>transducin family protein / WD-40 repeat family protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u101086400000i">OMAT1P108640</a></td><td>0.958481</td><td>-</td><td>AT1G27470</td><td>transducin-related / WD-40 repeat protein-related</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u101183400000i">OMAT1P118340</a></td><td>0.956408</td><td>-</td><td>AT1G72320</td><td>APUM23 (Arabidopsis Pumilio 23)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u201096000000i">OMAT2P109600</a></td><td>0.955758</td><td>-</td><td>AT2G39390</td><td>60S ribosomal protein L35 (RPL35B)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u101051700000i">OMAT1P105170</a></td><td>0.952305</td><td>-</td><td>AT1G15440</td><td>transducin family protein / WD-40 repeat family protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u201026900000i">OMAT2P102690</a></td><td>0.950805</td><td>-</td><td>AT2G18900,AT2G18910</td><td>[AT2G18900]transducin family protein / WD-40 repeat family protein, [AT2G18910]hydroxyproline-rich glycoprotein family protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u301136500000i">OMAT3P113650</a></td><td>0.950258</td><td>-</td><td>AT3G56070</td><td>ROC2 (ROTAMASE CYCLOPHILIN 2)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u301071200000i">OMAT3P107120</a></td><td>0.948429</td><td>-</td><td>AT3G21540</td><td>transducin family protein / WD-40 repeat family protein</td><td>-</td><td>-</td></tr><tr><th colspan=7 align="left">Negatively Correlated Genes</th></tr><tr><th>Gens</th><th>PCC</th><th>Definition</th><th>Overlap gene</th><th>Definition</th><th>Overlap gene(antisense)</th><th>Definition</th></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u500197300000i">OMAT5P019730</a></td><td>-0.773337</td><td>-</td><td>AT5G64240</td><td>AtMC3 (metacaspase 3)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u200021800000i">OMAT2P002180</a></td><td>-0.758978</td><td>-</td><td>AT2G16050</td><td>FUNCTIONS IN: molecular_function unknown</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u300140500000i">OMAT3P014050</a></td><td>-0.751494</td><td>-</td><td>AT3G52070</td><td>unknown protein</td><td>AT3G52072</td><td>other RNA</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u401070100000i">OMAT4P107010</a></td><td>-0.742376</td><td>-</td><td>AT4G25650</td><td>ACD1-LIKE (ACD1-LIKE)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u301009000000i">OMAT3P100900</a></td><td>-0.720138</td><td>-</td><td>AT3G03150</td><td>unknown protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u201042500000i">OMAT2P104250</a></td><td>-0.712953</td><td>-</td><td>AT2G23810</td><td>TET8 (TETRASPANIN8)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u100242900000i">OMAT1P024290</a></td><td>-0.705246</td><td>-</td><td>AT1G80960</td><td>F-box protein-related</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u500183800000i">OMAT5P018380</a></td><td>-0.699891</td><td>-</td><td>AT5G60360</td><td>AALP (Arabidopsis aleurain-like protease)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u500008100000i">OMAT5P000810</a></td><td>-0.688837</td><td>-</td><td>AT5G02970</td><td>hydrolase, alpha/beta fold family protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u500083300000i">OMAT5P008330</a></td><td>-0.685968</td><td>-</td><td>AT5G24450</td><td>unknown protein</td><td>-</td><td>-</td></tr></table><br><a href="/dbfiles/SciNetS_ria227i/cria227s1i/cria227s1ria227u201125000000i/OMAT2P112500-correlation.txt">Get whole results</a><br><br> <HR><b>Over-Representation Analysis Result</b><br><br><table border="1"><tr bgcolor=#FF69B4><td></td><td><i>p</i>-value</td><td> <= 1.26e-37</td><td>:20 terms with high significance</td></a></tr><tr bgcolor=#FFFACD><td>1.26e-37 < </td><td><i>p</i>-value</td><td> <= 8.76e-06</td><td> :With considering multiple testing correction;<br><i>p</i> <= 1.00e-02 / 1142</td></tr><tr bgcolor=#FFFFFF><td>8.76e-06 < </td><td><i>p</i>-value</td><td> <= 1.00e-02</td><td></td></tr></table><br><table border="1"><tr><th>Type of term (*1)</th><th>Depth of the term in ontology tree</th><th>ID/Term</th><th>Description</th><th>Number of genes</th><th>Over-Representative rate (*2)</th><th><i>p</i>-value (*3)</th><th>PosMed <i>p</i>-value (*4)<br> (Link to PosMed)</th><th>Found on gene annotation</th></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0042254</td><td>ribosome biogenesis</td><td>17/201</td><td>13.20</td><td>1.16e-15</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0022613</td><td>ribonucleoprotein complex biogenesis</td><td>17/201</td><td>12.78</td><td>2.06e-15</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0006412</td><td>translation</td><td>32/201</td><td>4.39</td><td>3.93e-13</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0006396</td><td>RNA processing</td><td>18/201</td><td>8.09</td><td>1.36e-12</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0010467</td><td>gene expression</td><td>53/201</td><td>2.59</td><td>1.73e-11</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT2G47990&keyword=gene%20expression">1.77E-15</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0044260</td><td>cellular macromolecule metabolic process</td><td>66/201</td><td>1.86</td><td>5.38e-08</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0043170</td><td>macromolecule metabolic process</td><td>67/201</td><td>1.72</td><td>8.59e-07</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0016070</td><td>RNA metabolic process</td><td>24/201</td><td>2.81</td><td>1.65e-06</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0006139</td><td>nucleobase, nucleoside, nucleotide and nucleic acid metabolic process</td><td>36/201</td><td>2.12</td><td>5.22e-06</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0044237</td><td>cellular metabolic process</td><td>73/201</td><td>1.54</td><td>1.77e-05</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0090304</td><td>nucleic acid metabolic process</td><td>32/201</td><td>2.12</td><td>1.78e-05</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0044267</td><td>cellular protein metabolic process</td><td>39/201</td><td>1.90</td><td>2.81e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0034641</td><td>cellular nitrogen compound metabolic process</td><td>37/201</td><td>1.89</td><td>5.08e-05</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0044238</td><td>primary metabolic process</td><td>74/201</td><td>1.49</td><td>5.20e-05</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0006807</td><td>nitrogen compound metabolic process</td><td>37/201</td><td>1.86</td><td>7.71e-05</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0034645</td><td>cellular macromolecule biosynthetic process</td><td>39/201</td><td>1.80</td><td>9.78e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0009059</td><td>macromolecule biosynthetic process</td><td>39/201</td><td>1.79</td><td>1.04e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0044249</td><td>cellular biosynthetic process</td><td>47/201</td><td>1.66</td><td>1.33e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0019538</td><td>protein metabolic process</td><td>40/201</td><td>1.72</td><td>2.00e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0009058</td><td>biosynthetic process</td><td>47/201</td><td>1.61</td><td>3.01e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0048608</td><td>reproductive structure development</td><td>12/201</td><td>2.45</td><td>1.40e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0009791</td><td>post-embryonic development</td><td>13/201</td><td>2.19</td><td>2.78e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0003006</td><td>reproductive developmental process</td><td>12/201</td><td>2.17</td><td>3.98e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0048856</td><td>anatomical structure development</td><td>17/201</td><td>1.89</td><td>4.18e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0022414</td><td>reproductive process</td><td>12/201</td><td>1.98</td><td>8.24e-03</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>C</td><td>3</td><td>GO:0043228</td><td>non-membrane-bounded organelle</td><td>56/201</td><td>9.35</td><td>2.69e-39</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>4</td><td>GO:0043232</td><td>intracellular non-membrane-bounded organelle</td><td>56/201</td><td>9.35</td><td>2.69e-39</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>5</td><td>GO:0005730</td><td>nucleolus</td><td>32/201</td><td>18.58</td><td>1.89e-32</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT2G47990&keyword=nucleolus">2.36E-17</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>4</td><td>GO:0070013</td><td>intracellular organelle lumen</td><td>35/201</td><td>12.84</td><td>1.47e-29</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0043233</td><td>organelle lumen</td><td>35/201</td><td>12.81</td><td>1.58e-29</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>5</td><td>GO:0031981</td><td>nuclear lumen</td><td>33/201</td><td>13.58</td><td>8.93e-29</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>4</td><td>GO:0044428</td><td>nuclear part</td><td>34/201</td><td>10.17</td><td>2.45e-25</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0044446</td><td>intracellular organelle part</td><td>63/201</td><td>4.37</td><td>3.59e-25</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0044422</td><td>organelle part</td><td>63/201</td><td>4.37</td><td>3.76e-25</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0030529</td><td>ribonucleoprotein complex</td><td>32/201</td><td>9.13</td><td>1.81e-22</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0005622</td><td>intracellular</td><td>116/201</td><td>2.17</td><td>3.33e-21</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>4</td><td>GO:0005840</td><td>ribosome</td><td>27/201</td><td>10.49</td><td>7.87e-21</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0044424</td><td>intracellular part</td><td>109/201</td><td>2.13</td><td>8.96e-19</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0043229</td><td>intracellular organelle</td><td>103/201</td><td>2.22</td><td>9.12e-19</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>5</td><td>GO:0022626</td><td>cytosolic ribosome</td><td>22/201</td><td>11.89</td><td>1.45e-18</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>4</td><td>GO:0033279</td><td>ribosomal subunit</td><td>21/201</td><td>12.87</td><td>1.49e-18</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>5</td><td>GO:0015934</td><td>large ribosomal subunit</td><td>16/201</td><td>17.30</td><td>7.25e-17</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>5</td><td>GO:0044445</td><td>cytosolic part</td><td>19/201</td><td>12.62</td><td>7.66e-17</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>5</td><td>GO:0005634</td><td>nucleus</td><td>48/201</td><td>3.05</td><td>5.19e-13</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT2G47990&keyword=nucleus">3.64E-21</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>5</td><td>GO:0005829</td><td>cytosol</td><td>24/201</td><td>5.77</td><td>8.67e-13</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>4</td><td>GO:0043231</td><td>intracellular membrane-bounded organelle</td><td>83/201</td><td>1.88</td><td>2.16e-10</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0043227</td><td>membrane-bounded organelle</td><td>83/201</td><td>1.88</td><td>2.18e-10</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>4</td><td>GO:0044444</td><td>cytoplasmic part</td><td>70/201</td><td>2.01</td><td>7.08e-10</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>4</td><td>GO:0005737</td><td>cytoplasm</td><td>73/201</td><td>1.94</td><td>1.19e-09</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0044464</td><td>cell part</td><td>125/201</td><td>1.36</td><td>9.54e-07</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>5</td><td>GO:0005739</td><td>mitochondrion</td><td>18/201</td><td>2.80</td><td>2.75e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>3</td><td>GO:0043234</td><td>protein complex</td><td>14/201</td><td>2.13</td><td>2.67e-03</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT2G47990&keyword=protein%20complex">2.00E-05</a></td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FFFACD><td>M</td><td>3</td><td>GO:0003735</td><td>structural constituent of ribosome</td><td>25/201</td><td>11.49</td><td>2.00e-20</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>M</td><td>4</td><td>GO:0003723</td><td>RNA binding</td><td>33/201</td><td>4.73</td><td>2.01e-14</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT2G47990&keyword=binding">0</a></td><td>no</td></tr><tr bgcolor=#FFFACD><td>M</td><td>3</td><td>GO:0003676</td><td>nucleic acid binding</td><td>55/201</td><td>2.31</td><td>5.70e-10</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>M</td><td>5</td><td>GO:0008168</td><td>methyltransferase activity</td><td>11/201</td><td>8.39</td><td>9.68e-09</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>M</td><td>4</td><td>GO:0016741</td><td>transferase activity, transferring one-carbon groups</td><td>11/201</td><td>8.31</td><td>1.07e-08</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>M</td><td>3</td><td>GO:0000166</td><td>nucleotide binding</td><td>34/201</td><td>2.56</td><td>1.31e-07</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT2G47990&keyword=nucleotide%20binding">0</a></td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>5</td><td>GO:0016818</td><td>hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides</td><td>11/201</td><td>2.46</td><td>1.93e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>4</td><td>GO:0016817</td><td>hydrolase activity, acting on acid anhydrides</td><td>11/201</td><td>2.44</td><td>2.09e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>4</td><td>GO:0017076</td><td>purine nucleotide binding</td><td>18/201</td><td>1.73</td><td>8.75e-03</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>PS</td><td>5</td><td>PO:0020038</td><td>petiole</td><td>172/201</td><td>2.25</td><td>3.41e-45</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>5</td><td>PO:0009052</td><td>pedicel</td><td>176/201</td><td>2.15</td><td>1.08e-44</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0000037</td><td>shoot apex</td><td>178/201</td><td>2.06</td><td>9.47e-43</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>5</td><td>PO:0020039</td><td>leaf lamina</td><td>173/201</td><td>2.09</td><td>9.33e-41</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>3</td><td>PO:0009032</td><td>petal</td><td>176/201</td><td>2.00</td><td>1.88e-39</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0009025</td><td>leaf</td><td>178/201</td><td>1.93</td><td>4.67e-38</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>3</td><td>PO:0009005</td><td>root</td><td>176/201</td><td>1.95</td><td>1.26e-37</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT2G47990&keyword=root">1.43E-16</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0000013</td><td>cauline leaf</td><td>164/201</td><td>2.11</td><td>8.82e-37</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009027</td><td>megasporophyll</td><td>170/201</td><td>2.01</td><td>9.76e-37</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0008034</td><td>leaf whorl</td><td>178/201</td><td>1.88</td><td>2.70e-36</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0008033</td><td>phyllome whorl</td><td>178/201</td><td>1.88</td><td>2.70e-36</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0008037</td><td>seedling</td><td>173/201</td><td>1.95</td><td>3.87e-36</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009047</td><td>stem</td><td>169/201</td><td>1.99</td><td>1.54e-35</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009031</td><td>sepal</td><td>175/201</td><td>1.88</td><td>6.56e-35</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009028</td><td>microsporophyll</td><td>167/201</td><td>1.98</td><td>3.40e-34</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009026</td><td>sporophyll</td><td>172/201</td><td>1.90</td><td>5.96e-34</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009010</td><td>seed</td><td>177/201</td><td>1.80</td><td>7.95e-33</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009009</td><td>embryo</td><td>176/201</td><td>1.81</td><td>9.05e-33</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT2G47990&keyword=embryo">0</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009001</td><td>fruit</td><td>177/201</td><td>1.79</td><td>1.80e-32</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0006342</td><td>infructescence</td><td>177/201</td><td>1.79</td><td>1.80e-32</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0006001</td><td>phyllome</td><td>180/201</td><td>1.75</td><td>2.52e-32</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009046</td><td>flower</td><td>179/201</td><td>1.71</td><td>2.06e-30</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009049</td><td>inflorescence</td><td>179/201</td><td>1.70</td><td>5.32e-30</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009006</td><td>shoot</td><td>181/201</td><td>1.66</td><td>2.95e-29</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0020030</td><td>cotyledon</td><td>150/201</td><td>2.03</td><td>1.13e-28</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0000230</td><td>inflorescence meristem</td><td>154/201</td><td>1.97</td><td>1.69e-28</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009013</td><td>meristem</td><td>155/201</td><td>1.92</td><td>2.31e-27</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0020091</td><td>male gametophyte</td><td>125/201</td><td>1.50</td><td>9.95e-10</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT2G47990&keyword=male%20gametophyte">3.93E-19</a></td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>4</td><td>PO:0000351</td><td>guard mother cell</td><td>26/201</td><td>2.39</td><td>1.24e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>3</td><td>PO:0000070</td><td>meristemoid</td><td>26/201</td><td>2.39</td><td>1.28e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>5</td><td>PO:0006016</td><td>leaf epidermis</td><td>26/201</td><td>2.33</td><td>2.05e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>5</td><td>PO:0006035</td><td>shoot epidermis</td><td>26/201</td><td>2.31</td><td>2.32e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>3</td><td>PO:0004013</td><td>epidermal cell</td><td>27/201</td><td>2.25</td><td>2.59e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>5</td><td>PO:0000349</td><td>epidermal initial</td><td>26/201</td><td>2.29</td><td>2.61e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>4</td><td>PO:0004011</td><td>initial cell</td><td>26/201</td><td>2.28</td><td>2.92e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>3</td><td>PO:0004010</td><td>meristematic cell</td><td>26/201</td><td>2.28</td><td>3.00e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>4</td><td>PO:0005679</td><td>epidermis</td><td>27/201</td><td>2.17</td><td>5.02e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>3</td><td>PO:0009014</td><td>dermal tissue</td><td>27/201</td><td>2.17</td><td>5.07e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>4</td><td>PO:0000293</td><td>guard cell</td><td>24/201</td><td>2.22</td><td>8.60e-05</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>PG</td><td>5</td><td>PO:0001081</td><td>F mature embryo stage</td><td>177/201</td><td>2.21</td><td>2.71e-47</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>5</td><td>PO:0001078</td><td>E expanded cotyledon stage</td><td>177/201</td><td>2.12</td><td>2.86e-44</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>5</td><td>PO:0004507</td><td>D bilateral stage</td><td>176/201</td><td>2.13</td><td>8.86e-44</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>5</td><td>PO:0001185</td><td>C globular stage</td><td>175/201</td><td>2.12</td><td>4.90e-43</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>3</td><td>PO:0007134</td><td>A vegetative growth</td><td>175/201</td><td>2.06</td><td>7.99e-41</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>5</td><td>PO:0007133</td><td>leaf production</td><td>174/201</td><td>2.06</td><td>2.47e-40</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>4</td><td>PO:0007112</td><td>1 main shoot growth</td><td>174/201</td><td>2.06</td><td>2.55e-40</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>4</td><td>PO:0001054</td><td>4 leaf senescence stage</td><td>167/201</td><td>2.16</td><td>1.01e-39</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>3</td><td>PO:0001050</td><td>leaf development stages</td><td>167/201</td><td>2.16</td><td>1.09e-39</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>4</td><td>PO:0007631</td><td>embryo development stages</td><td>177/201</td><td>1.96</td><td>1.53e-38</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT2G47990&keyword=embryo%20development%20stages">1.98E-17</a></td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>3</td><td>PO:0001170</td><td>seed development stages</td><td>177/201</td><td>1.95</td><td>3.07e-38</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007616</td><td>4 anthesis</td><td>177/201</td><td>1.82</td><td>1.98e-33</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0007604</td><td>corolla developmental stages</td><td>178/201</td><td>1.79</td><td>4.06e-33</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007600</td><td>3 floral organ development stages</td><td>178/201</td><td>1.74</td><td>5.94e-31</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0007615</td><td>flower development stages</td><td>178/201</td><td>1.69</td><td>4.53e-29</td><td>-</td><td>yes</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>ribosome</td><td>-</td><td>35/201</td><td>13.19</td><td>5.65e-30</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>nucleolus</td><td>-</td><td>27/201</td><td>19.77</td><td>1.84e-28</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT2G47990&keyword=nucleolus">2.36E-17</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>ribosomal</td><td>-</td><td>34/201</td><td>11.21</td><td>9.51e-27</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT2G47990&keyword=ribosomal">1.20E-16</a></td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>constituent</td><td>-</td><td>27/201</td><td>9.59</td><td>8.58e-20</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>translation</td><td>-</td><td>34/201</td><td>6.83</td><td>1.07e-19</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>structural</td><td>-</td><td>28/201</td><td>7.95</td><td>3.00e-18</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>processing</td><td>-</td><td>19/201</td><td>13.32</td><td>2.68e-17</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>subunit</td><td>-</td><td>37/201</td><td>5.02</td><td>7.53e-17</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT2G47990&keyword=subunit">2.00E-09</a></td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>large</td><td>-</td><td>17/201</td><td>11.03</td><td>2.70e-14</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>cytosolic</td><td>-</td><td>19/201</td><td>8.83</td><td>7.09e-14</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>eukaryotic</td><td>-</td><td>18/201</td><td>9.11</td><td>1.69e-13</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>transducin</td><td>-</td><td>11/201</td><td>14.92</td><td>1.24e-11</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>nucleotide</td><td>-</td><td>27/201</td><td>4.22</td><td>6.17e-11</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT2G47990&keyword=nucleotide">0</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>ipr017986</td><td>-</td><td>13/201</td><td>9.64</td><td>1.04e-10</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>ipr001680</td><td>-</td><td>13/201</td><td>8.71</td><td>3.98e-10</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>ipr015943</td><td>-</td><td>13/201</td><td>8.60</td><td>4.66e-10</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>ipr011046</td><td>-</td><td>13/201</td><td>8.34</td><td>7.03e-10</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>biogenesis</td><td>-</td><td>11/201</td><td>8.05</td><td>1.52e-08</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT2G47990&keyword=biogenesis">2.96E-17</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>ipr002885</td><td>-</td><td>15/201</td><td>5.33</td><td>2.94e-08</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>pentatricopeptide</td><td>-</td><td>15/201</td><td>5.14</td><td>4.82e-08</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>motif</td><td>-</td><td>19/201</td><td>3.89</td><td>1.18e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>methyltransferase</td><td>-</td><td>11/201</td><td>6.59</td><td>1.36e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>small</td><td>-</td><td>16/201</td><td>3.95</td><td>7.84e-07</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT2G47990&keyword=small">1.51E-15</a></td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>mitochondrial</td><td>-</td><td>11/201</td><td>4.85</td><td>3.42e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>repeat</td><td>-</td><td>30/201</td><td>2.30</td><td>6.51e-06</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT2G47990&keyword=repeat">2.00E-06</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>defective</td><td>-</td><td>11/201</td><td>4.47</td><td>7.83e-06</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT2G47990&keyword=defective">9.00E-09</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>nucleic</td><td>-</td><td>19/201</td><td>2.89</td><td>1.09e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>nuclear</td><td>-</td><td>12/201</td><td>3.89</td><td>1.57e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>complex</td><td>-</td><td>22/201</td><td>2.59</td><td>1.58e-05</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT2G47990&keyword=complex">2.00E-05</a></td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>mitochondrion</td><td>-</td><td>16/201</td><td>2.90</td><td>4.37e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>intracellular</td><td>-</td><td>15/201</td><td>2.89</td><td>7.33e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>alpha</td><td>-</td><td>18/201</td><td>2.46</td><td>1.54e-04</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT2G47990&keyword=alpha">9.00E-08</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>terminal</td><td>-</td><td>35/201</td><td>1.81</td><td>2.02e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>region</td><td>-</td><td>28/201</td><td>1.93</td><td>2.84e-04</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>conserved</td><td>-</td><td>26/201</td><td>1.91</td><td>5.19e-04</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT2G47990&keyword=conserved">3.05E-16</a></td><td>no</td></tr></table><table><tr><td valign=top>(*1)</td><td>[B]:Biological process(Gene ontology), [C]:Cellular component(Gene ontology), [M]:Molecular function(Gene ontology), [PS]:Plant Structure(Plant ontology), [PG]:Growth and developmental stages(Plant ontology), [KW]:words found in gene description.</td></tr><tr><td valign=top>(*2)</td><td>([# of genes with the term] / [# of sampling (200)]) / ([# of genes with the term among whole genes] / [# of whole genes]) </td></tr><tr><td valign=top>(*3)</td><td>P-values were calculated on hypergeometric distribution in which we found <i>n</i> genes with a annotation term during 200 highly correlated genes, while we had <i>N</i> genes with the term in the whole genes.</td></tr><tr><td valign=top>(*4)</td><td><a href="http://omicspace.riken.jp/PosMed-plus/">PosMed</a> is a system which serve a p-values showing a relationship between the gene and the annotation term based on literature information and Gene-Gene interaction suchas co-expression or protein-protein interactions.</td></tr></table><hr><a href="/db/SciNetS_ria227i/cria227s904i">Top Page</a></body></html>