0.7987570000000000503
OMAT3P004540
with_AGI_gene
<html><body><title>OMAT3P004540</title>(↑ Click "Links", if this line appears at the beginning.)<br><H1>Other supporting information</H1><table><tr><td colspan="2" align="left"><b>Gene Model</b><br></td></tr><tr><td NOWRAP width="75"></td><td NOWRAP><img src="/dbfiles/SciNetS_ria227i/cria227s1i/cria227s1ria227u300045400000i/OMAT3P004540.gene_models.png" width="717"><br></td></tr><tr><td colspan=2 align="left"><b>Correlation Plot</b><br></td></tr><tr><td NOWRAP colspan="2" align="left"><img src="/dbfiles/SciNetS_ria227i/cria227s1i/cria227s1ria227u300045400000i/OMAT3P004540.CorrPlot.jpg" width="800"><br><br></td></tr></table><hr><b>Expression profile (Values are plotted in Log(2) values.)</b><br><img src="/dbfiles/SciNetS_ria227i/cria227s1i/cria227s1ria227u300045400000i/OMAT3P004540.F0.Expression.png"><br><hr><b>Genes with related expresssion profiles.</b><br><table border=1><tr><th colspan=7 align="left">Positively Correlated Genes</th></tr><tr><th>Gens</th><th>PCC</th><th>Definition</th><th>Overlap gene</th><th>Definition</th><th>Overlap gene(antisense)</th><th>Definition</th></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u100180200000i">OMAT1P018020</a></td><td>0.960529</td><td>-</td><td>AT1G65080</td><td>OXA1 family protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u300181400000i">OMAT3P018140</a></td><td>0.951794</td><td>-</td><td>AT3G63400</td><td>peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u100030000000i">OMAT1P003000</a></td><td>0.942778</td><td>-</td><td>AT1G08910</td><td>EMB3001 (embryo defective 3001)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u400057700000i">OMAT4P005770</a></td><td>0.937631</td><td>-</td><td>AT4G18905</td><td>transducin family protein / WD-40 repeat family protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u400040700000i">OMAT4P004070</a></td><td>0.936604</td><td>-</td><td>AT4G14850</td><td>LOI1 (lovastatin insensitive 1)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u400021400000i">OMAT4P002140</a></td><td>0.936132</td><td>-</td><td>AT4G08900</td><td>arginase</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u100161950000i">OMAT1P016195</a></td><td>0.935851</td><td>-</td><td>AT1G59510</td><td>CF9</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u100163100000i">OMAT1P016310</a></td><td>0.93529</td><td>-</td><td>AT1G59750</td><td>ARF1 (AUXIN RESPONSE FACTOR 1)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u300003700000i">OMAT3P000370</a></td><td>0.935064</td><td>-</td><td>AT3G01740</td><td>FUNCTIONS IN: molecular_function unknown</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u501060800000i">OMAT5P106080</a></td><td>0.93457</td><td>-</td><td>AT5G20510</td><td>AL5 (ALFIN-LIKE 5)</td><td>-</td><td>-</td></tr><tr><th colspan=7 align="left">Negatively Correlated Genes</th></tr><tr><th>Gens</th><th>PCC</th><th>Definition</th><th>Overlap gene</th><th>Definition</th><th>Overlap gene(antisense)</th><th>Definition</th></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u100104800000i">OMAT1P010480</a></td><td>-0.883165</td><td>-</td><td>AT1G29930</td><td>CAB1 (CHLOROPHYLL A/B BINDING PROTEIN 1)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u201059600000i">OMAT2P105960</a></td><td>-0.854867</td><td>-</td><td>AT2G29390</td><td>SMO2-2 (STEROL 4-ALPHA-METHYL-OXIDASE 2-2)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u300006600000i">OMAT3P000660</a></td><td>-0.849528</td><td>-</td><td>AT3G02470,AT3G02468</td><td>[AT3G02470]SAMDC (S-ADENOSYLMETHIONINE DECARBOXYLASE), [AT3G02468]CPuORF9 (Conserved peptide upstream open reading frame 9)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u301053100000i">OMAT3P105310</a></td><td>-0.84441</td><td>-</td><td>AT3G15810</td><td>unknown protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u100074300000i">OMAT1P007430</a></td><td>-0.835713</td><td>-</td><td>AT1G20260</td><td>hydrogen ion transporting ATP synthase, rotational mechanism / hydrolase, acting on acid anhydrides, catalyzing transmembrane movement of substances / proton-transporting ATPase, rotational mechanism</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u401010900000i">OMAT4P101090</a></td><td>-0.832911</td><td>-</td><td>AT4G03110</td><td>RNA-binding protein, putative</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u301127150000i">OMAT3P112715</a></td><td>-0.826896</td><td>-</td><td>AT3G53420</td><td>PIP2A (PLASMA MEMBRANE INTRINSIC PROTEIN 2A)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u200029500000i">OMAT2P002950</a></td><td>-0.819713</td><td>-</td><td>-</td><td>-</td><td>AT2G18540</td><td>cupin family protein</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u400135750000i">OMAT4P013575</a></td><td>-0.817646</td><td>-</td><td>AT4G39080</td><td>VHA-A3 (VACUOLAR PROTON ATPASE A3)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u400135700000i">OMAT4P013570</a></td><td>-0.816389</td><td>-</td><td>AT4G39080</td><td>VHA-A3 (VACUOLAR PROTON ATPASE A3)</td><td>-</td><td>-</td></tr></table><br><a href="/dbfiles/SciNetS_ria227i/cria227s1i/cria227s1ria227u300045400000i/OMAT3P004540-correlation.txt">Get whole results</a><br><br> <HR><b>Over-Representation Analysis Result</b><br><br><table border="1"><tr bgcolor=#FF69B4><td></td><td><i>p</i>-value</td><td> <= 1.36e-18</td><td>:20 terms with high significance</td></a></tr><tr bgcolor=#FFFACD><td>1.36e-18 < </td><td><i>p</i>-value</td><td> <= 8.76e-06</td><td> :With considering multiple testing correction;<br><i>p</i> <= 1.00e-02 / 1142</td></tr><tr bgcolor=#FFFFFF><td>8.76e-06 < </td><td><i>p</i>-value</td><td> <= 1.00e-02</td><td></td></tr></table><br><table border="1"><tr><th>Type of term (*1)</th><th>Depth of the term in ontology tree</th><th>ID/Term</th><th>Description</th><th>Number of genes</th><th>Over-Representative rate (*2)</th><th><i>p</i>-value (*3)</th><th>PosMed <i>p</i>-value (*4)<br> (Link to PosMed)</th><th>Found on gene annotation</th></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0007275</td><td>multicellular organismal development</td><td>27/200</td><td>2.54</td><td>2.78e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0009790</td><td>embryonic development</td><td>11/200</td><td>4.17</td><td>1.58e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0006996</td><td>organelle organization</td><td>11/200</td><td>3.30</td><td>1.49e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0090304</td><td>nucleic acid metabolic process</td><td>28/200</td><td>1.86</td><td>4.99e-04</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0044237</td><td>cellular metabolic process</td><td>67/200</td><td>1.42</td><td>5.56e-04</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0048856</td><td>anatomical structure development</td><td>19/200</td><td>2.12</td><td>6.93e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0034641</td><td>cellular nitrogen compound metabolic process</td><td>33/200</td><td>1.70</td><td>9.30e-04</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0009791</td><td>post-embryonic development</td><td>14/200</td><td>2.37</td><td>9.61e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0006807</td><td>nitrogen compound metabolic process</td><td>33/200</td><td>1.66</td><td>1.30e-03</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0044260</td><td>cellular macromolecule metabolic process</td><td>51/200</td><td>1.45</td><td>1.90e-03</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0006139</td><td>nucleobase, nucleoside, nucleotide and nucleic acid metabolic process</td><td>28/200</td><td>1.66</td><td>2.92e-03</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0048608</td><td>reproductive structure development</td><td>11/200</td><td>2.26</td><td>3.88e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0042180</td><td>cellular ketone metabolic process</td><td>10/200</td><td>2.23</td><td>5.75e-03</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0022414</td><td>reproductive process</td><td>12/200</td><td>1.99</td><td>7.92e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0003006</td><td>reproductive developmental process</td><td>11/200</td><td>2.00</td><td>9.82e-03</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0043229</td><td>intracellular organelle</td><td>85/200</td><td>1.84</td><td>3.31e-10</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>4</td><td>GO:0043231</td><td>intracellular membrane-bounded organelle</td><td>80/200</td><td>1.82</td><td>2.65e-09</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0043227</td><td>membrane-bounded organelle</td><td>80/200</td><td>1.82</td><td>2.67e-09</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0044424</td><td>intracellular part</td><td>88/200</td><td>1.73</td><td>3.91e-09</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0005622</td><td>intracellular</td><td>90/200</td><td>1.69</td><td>6.81e-09</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>5</td><td>GO:0005634</td><td>nucleus</td><td>37/200</td><td>2.37</td><td>2.75e-07</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>4</td><td>GO:0044428</td><td>nuclear part</td><td>14/200</td><td>4.21</td><td>1.49e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>5</td><td>GO:0005739</td><td>mitochondrion</td><td>20/200</td><td>3.13</td><td>2.04e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0043234</td><td>protein complex</td><td>20/200</td><td>3.06</td><td>2.89e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>4</td><td>GO:0070013</td><td>intracellular organelle lumen</td><td>11/200</td><td>4.06</td><td>2.06e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>3</td><td>GO:0043233</td><td>organelle lumen</td><td>11/200</td><td>4.05</td><td>2.11e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>5</td><td>GO:0031981</td><td>nuclear lumen</td><td>10/200</td><td>4.14</td><td>3.55e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>3</td><td>GO:0044446</td><td>intracellular organelle part</td><td>30/200</td><td>2.09</td><td>4.02e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>3</td><td>GO:0044422</td><td>organelle part</td><td>30/200</td><td>2.09</td><td>4.09e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>4</td><td>GO:0044444</td><td>cytoplasmic part</td><td>54/200</td><td>1.56</td><td>2.32e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>4</td><td>GO:0005737</td><td>cytoplasm</td><td>57/200</td><td>1.52</td><td>2.67e-04</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>3</td><td>GO:0043228</td><td>non-membrane-bounded organelle</td><td>15/200</td><td>2.52</td><td>3.52e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>4</td><td>GO:0043232</td><td>intracellular non-membrane-bounded organelle</td><td>15/200</td><td>2.52</td><td>3.52e-04</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FFFFFF><td>M</td><td>3</td><td>GO:0003676</td><td>nucleic acid binding</td><td>35/200</td><td>1.48</td><td>7.01e-03</td><td>-</td><td>yes</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>PS</td><td>5</td><td>PO:0009052</td><td>pedicel</td><td>153/200</td><td>1.88</td><td>1.00e-25</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0000037</td><td>shoot apex</td><td>157/200</td><td>1.82</td><td>2.02e-25</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0009047</td><td>stem</td><td>153/200</td><td>1.81</td><td>9.27e-24</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>3</td><td>PO:0009010</td><td>seed</td><td>162/200</td><td>1.66</td><td>1.10e-21</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0009001</td><td>fruit</td><td>162/200</td><td>1.65</td><td>2.14e-21</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>3</td><td>PO:0006342</td><td>infructescence</td><td>162/200</td><td>1.65</td><td>2.14e-21</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>3</td><td>PO:0009031</td><td>sepal</td><td>156/200</td><td>1.69</td><td>6.46e-21</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>5</td><td>PO:0008034</td><td>leaf whorl</td><td>157/200</td><td>1.66</td><td>1.87e-20</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0008033</td><td>phyllome whorl</td><td>157/200</td><td>1.66</td><td>1.87e-20</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0009009</td><td>embryo</td><td>158/200</td><td>1.64</td><td>8.62e-20</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>3</td><td>PO:0009005</td><td>root</td><td>152/200</td><td>1.69</td><td>8.64e-20</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0009049</td><td>inflorescence</td><td>163/200</td><td>1.56</td><td>1.35e-18</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0000230</td><td>inflorescence meristem</td><td>138/200</td><td>1.78</td><td>1.36e-18</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009046</td><td>flower</td><td>162/200</td><td>1.56</td><td>2.65e-18</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009026</td><td>sporophyll</td><td>149/200</td><td>1.66</td><td>5.06e-18</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009028</td><td>microsporophyll</td><td>143/200</td><td>1.71</td><td>5.88e-18</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009027</td><td>megasporophyll</td><td>143/200</td><td>1.70</td><td>6.68e-18</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0008037</td><td>seedling</td><td>147/200</td><td>1.67</td><td>8.10e-18</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009013</td><td>meristem</td><td>139/200</td><td>1.73</td><td>1.15e-17</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0020039</td><td>leaf lamina</td><td>141/200</td><td>1.71</td><td>1.25e-17</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009006</td><td>shoot</td><td>164/200</td><td>1.51</td><td>3.29e-17</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009032</td><td>petal</td><td>145/200</td><td>1.65</td><td>4.84e-17</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0006001</td><td>phyllome</td><td>158/200</td><td>1.54</td><td>1.08e-16</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009025</td><td>leaf</td><td>148/200</td><td>1.61</td><td>1.86e-16</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0020038</td><td>petiole</td><td>131/200</td><td>1.72</td><td>1.01e-15</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0000013</td><td>cauline leaf</td><td>132/200</td><td>1.71</td><td>1.22e-15</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0020030</td><td>cotyledon</td><td>125/200</td><td>1.70</td><td>3.66e-14</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0020091</td><td>male gametophyte</td><td>134/200</td><td>1.62</td><td>8.43e-14</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0000084</td><td>sperm cell</td><td>71/200</td><td>2.19</td><td>8.32e-12</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0020097</td><td>generative cell</td><td>71/200</td><td>2.19</td><td>8.32e-12</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>4</td><td>PO:0006345</td><td>pollen tube</td><td>47/200</td><td>1.61</td><td>2.69e-04</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>PG</td><td>5</td><td>PO:0001078</td><td>E expanded cotyledon stage</td><td>158/200</td><td>1.90</td><td>3.65e-28</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>5</td><td>PO:0001081</td><td>F mature embryo stage</td><td>153/200</td><td>1.92</td><td>6.58e-27</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>5</td><td>PO:0004507</td><td>D bilateral stage</td><td>154/200</td><td>1.87</td><td>1.02e-25</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>4</td><td>PO:0007631</td><td>embryo development stages</td><td>159/200</td><td>1.77</td><td>2.80e-24</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>3</td><td>PO:0001170</td><td>seed development stages</td><td>159/200</td><td>1.76</td><td>4.88e-24</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>5</td><td>PO:0001185</td><td>C globular stage</td><td>147/200</td><td>1.79</td><td>2.48e-21</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>5</td><td>PO:0007604</td><td>corolla developmental stages</td><td>160/200</td><td>1.62</td><td>6.81e-20</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007616</td><td>4 anthesis</td><td>156/200</td><td>1.61</td><td>2.17e-18</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007600</td><td>3 floral organ development stages</td><td>160/200</td><td>1.57</td><td>3.31e-18</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0007133</td><td>leaf production</td><td>142/200</td><td>1.69</td><td>2.89e-17</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007112</td><td>1 main shoot growth</td><td>142/200</td><td>1.69</td><td>2.96e-17</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0007134</td><td>A vegetative growth</td><td>142/200</td><td>1.68</td><td>5.97e-17</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0007615</td><td>flower development stages</td><td>160/200</td><td>1.53</td><td>9.32e-17</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0001054</td><td>4 leaf senescence stage</td><td>133/200</td><td>1.73</td><td>2.50e-16</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0001050</td><td>leaf development stages</td><td>133/200</td><td>1.73</td><td>2.63e-16</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PG</td><td>5</td><td>PO:0007605</td><td>androecium developmental stages</td><td>51/200</td><td>1.74</td><td>1.84e-05</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>complex</td><td>-</td><td>26/200</td><td>3.07</td><td>1.11e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>polymerase</td><td>-</td><td>10/200</td><td>6.79</td><td>3.17e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>nuclear</td><td>-</td><td>14/200</td><td>4.56</td><td>5.58e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>mitochondrion</td><td>-</td><td>17/200</td><td>3.10</td><td>1.14e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>repeat</td><td>-</td><td>29/200</td><td>2.23</td><td>1.59e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>mitochondrial</td><td>-</td><td>10/200</td><td>4.43</td><td>1.88e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>biosynthesis</td><td>-</td><td>10/200</td><td>4.12</td><td>3.71e-05</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT3G12990&keyword=biosynthesis">3.75E-16</a></td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>subunit</td><td>-</td><td>19/200</td><td>2.59</td><td>5.12e-05</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT3G12990&keyword=subunit">4.21E-16</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>ubiquitin</td><td>-</td><td>13/200</td><td>2.89</td><td>1.88e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>nucleus</td><td>-</td><td>26/200</td><td>2.02</td><td>2.25e-04</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>helical</td><td>-</td><td>10/200</td><td>3.32</td><td>2.46e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>ligase</td><td>-</td><td>11/200</td><td>2.82</td><td>6.07e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>development</td><td>-</td><td>16/200</td><td>2.29</td><td>6.89e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>nucleotide</td><td>-</td><td>15/200</td><td>2.36</td><td>7.11e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>biological_process</td><td>-</td><td>80/200</td><td>1.34</td><td>8.64e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>region</td><td>-</td><td>26/200</td><td>1.80</td><td>1.27e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>transcription</td><td>-</td><td>26/200</td><td>1.79</td><td>1.37e-03</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT3G12990&keyword=transcription">1.02E-15</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>nucleic</td><td>-</td><td>14/200</td><td>2.14</td><td>2.52e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>cellular_component</td><td>-</td><td>65/200</td><td>1.33</td><td>3.56e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>motif</td><td>-</td><td>11/200</td><td>2.26</td><td>3.77e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>translation</td><td>-</td><td>11/200</td><td>2.22</td><td>4.40e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>embryo</td><td>-</td><td>14/200</td><td>2.02</td><td>4.43e-03</td><td>-</td><td>no</td></tr></table><table><tr><td valign=top>(*1)</td><td>[B]:Biological process(Gene ontology), [C]:Cellular component(Gene ontology), [M]:Molecular function(Gene ontology), [PS]:Plant Structure(Plant ontology), [PG]:Growth and developmental stages(Plant ontology), [KW]:words found in gene description.</td></tr><tr><td valign=top>(*2)</td><td>([# of genes with the term] / [# of sampling (200)]) / ([# of genes with the term among whole genes] / [# of whole genes]) </td></tr><tr><td valign=top>(*3)</td><td>P-values were calculated on hypergeometric distribution in which we found <i>n</i> genes with a annotation term during 200 highly correlated genes, while we had <i>N</i> genes with the term in the whole genes.</td></tr><tr><td valign=top>(*4)</td><td><a href="http://omicspace.riken.jp/PosMed-plus/">PosMed</a> is a system which serve a p-values showing a relationship between the gene and the annotation term based on literature information and Gene-Gene interaction suchas co-expression or protein-protein interactions.</td></tr></table><hr><a href="/db/SciNetS_ria227i/cria227s904i">Top Page</a></body></html>