0.74733700000000002905
with_AGI_gene
<html><body><title>OMAT3P011120</title>(↑ Click "Links", if this line appears at the beginning.)<br><H1>Other supporting information</H1><table><tr><td colspan="2" align="left"><b>Gene Model</b><br></td></tr><tr><td NOWRAP width="75"></td><td NOWRAP><img src="/dbfiles/SciNetS_ria227i/cria227s1i/cria227s1ria227u300111200000i/OMAT3P011120.gene_models.png" width="717"><br></td></tr><tr><td colspan=2 align="left"><b>Correlation Plot</b><br></td></tr><tr><td NOWRAP colspan="2" align="left"><img src="/dbfiles/SciNetS_ria227i/cria227s1i/cria227s1ria227u300111200000i/OMAT3P011120.CorrPlot.jpg" width="800"><br><br></td></tr></table><hr><b>Expression profile (Values are plotted in Log(2) values.)</b><br><img src="/dbfiles/SciNetS_ria227i/cria227s1i/cria227s1ria227u300111200000i/OMAT3P011120.F0.Expression.png"><br><hr><b>Genes with related expresssion profiles.</b><br><table border=1><tr><th colspan=7 align="left">Positively Correlated Genes</th></tr><tr><th>Gens</th><th>PCC</th><th>Definition</th><th>Overlap gene</th><th>Definition</th><th>Overlap gene(antisense)</th><th>Definition</th></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u200092600000i">OMAT2P009260</a></td><td>0.947442</td><td>-</td><td>AT2G36350</td><td>protein kinase, putative</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u101130400000i">OMAT1P113040</a></td><td>0.924465</td><td>-</td><td>AT1G53000</td><td>cytidylyltransferase family</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u400111600000i">OMAT4P011160</a></td><td>0.921765</td><td>-</td><td>AT4G33060</td><td>peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u500113400000i">OMAT5P011340</a></td><td>0.907471</td><td>-</td><td>AT5G41270</td><td>FUNCTIONS IN: molecular_function unknown</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u300035600000i">OMAT3P003560</a></td><td>0.906358</td><td>-</td><td>AT3G10330</td><td>transcription initiation factor IIB-2 / general transcription factor TFIIB-2 (TFIIB2)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u101181100000i">OMAT1P118110</a></td><td>0.906018</td><td>-</td><td>AT1G71350</td><td>eukaryotic translation initiation factor SUI1 family protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u200139500000i">OMAT2P013950</a></td><td>0.902783</td><td>-</td><td>AT2G48100</td><td>exonuclease family protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u100155700000i">OMAT1P015570</a></td><td>0.899567</td><td>-</td><td>AT1G55870</td><td>AHG2 (ABA-HYPERSENSITIVE GERMINATION 2)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u500043300000i">OMAT5P004330</a></td><td>0.899374</td><td>-</td><td>AT5G13070</td><td>MSF1-like family protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u100094500000i">OMAT1P009450</a></td><td>0.899127</td><td>-</td><td>AT1G26660,AT1G26665</td><td>[AT1G26660]c-myc binding protein, putative / prefoldin, putative, [AT1G26665]FUNCTIONS IN: molecular_function unknown</td><td>-</td><td>-</td></tr><tr><th colspan=7 align="left">Negatively Correlated Genes</th></tr><tr><th>Gens</th><th>PCC</th><th>Definition</th><th>Overlap gene</th><th>Definition</th><th>Overlap gene(antisense)</th><th>Definition</th></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u501004300000i">OMAT5P100430</a></td><td>-0.884289</td><td>-</td><td>AT5G02380</td><td>MT2B (METALLOTHIONEIN 2B)</td><td>AT5G02370</td><td>kinesin motor protein-related</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u301136200000i">OMAT3P113620</a></td><td>-0.853648</td><td>-</td><td>AT3G56050</td><td>protein kinase family protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u500046600000i">OMAT5P004660</a></td><td>-0.833917</td><td>-</td><td>AT5G13720</td><td>LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u101016200000i">OMAT1P101620</a></td><td>-0.831683</td><td>-</td><td>AT1G05850</td><td>POM1 (POM-POM1)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u101084600000i">OMAT1P108460</a></td><td>-0.829306</td><td>-</td><td>AT1G27100</td><td>FUNCTIONS IN: molecular_function unknown</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u300100200000i">OMAT3P010020</a></td><td>-0.822817</td><td>-</td><td>AT3G26650</td><td>GAPA (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u100235400000i">OMAT1P023540</a></td><td>-0.822769</td><td>-</td><td>AT1G79040</td><td>PSBR (photosystem II subunit R)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u100217200000i">OMAT1P021720</a></td><td>-0.820711</td><td>-</td><td>AT1G74640</td><td>unknown protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u201075900000i">OMAT2P107590</a></td><td>-0.819304</td><td>-</td><td>AT2G34420</td><td>LHB1B2</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u301108300000i">OMAT3P110830</a></td><td>-0.804362</td><td>-</td><td>AT3G47470</td><td>LHCA4 (LIGHT-HARVESTING CHLOROPHYLL-PROTEIN COMPLEX I SUBUNIT A4)</td><td>-</td><td>-</td></tr></table><br><a href="/dbfiles/SciNetS_ria227i/cria227s1i/cria227s1ria227u300111200000i/OMAT3P011120-correlation.txt">Get whole results</a><br><br> <HR><b>Over-Representation Analysis Result</b><br><br><table border="1"><tr bgcolor=#FF69B4><td></td><td><i>p</i>-value</td><td> <= 6.33e-15</td><td>:20 terms with high significance</td></a></tr><tr bgcolor=#FFFACD><td>6.33e-15 < </td><td><i>p</i>-value</td><td> <= 8.76e-06</td><td> :With considering multiple testing correction;<br><i>p</i> <= 1.00e-02 / 1142</td></tr><tr bgcolor=#FFFFFF><td>8.76e-06 < </td><td><i>p</i>-value</td><td> <= 1.00e-02</td><td></td></tr></table><br><table border="1"><tr><th>Type of term (*1)</th><th>Depth of the term in ontology tree</th><th>ID/Term</th><th>Description</th><th>Number of genes</th><th>Over-Representative rate (*2)</th><th><i>p</i>-value (*3)</th><th>PosMed <i>p</i>-value (*4)<br> (Link to PosMed)</th><th>Found on gene annotation</th></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0007275</td><td>multicellular organismal development</td><td>27/200</td><td>2.54</td><td>2.78e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0009790</td><td>embryonic development</td><td>12/200</td><td>4.55</td><td>2.94e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0048316</td><td>seed development</td><td>11/200</td><td>4.04</td><td>2.15e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0010154</td><td>fruit development</td><td>11/200</td><td>3.85</td><td>3.41e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0048608</td><td>reproductive structure development</td><td>15/200</td><td>3.08</td><td>3.56e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0009791</td><td>post-embryonic development</td><td>16/200</td><td>2.70</td><td>1.03e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0003006</td><td>reproductive developmental process</td><td>15/200</td><td>2.72</td><td>1.46e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0022414</td><td>reproductive process</td><td>15/200</td><td>2.49</td><td>3.97e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0048856</td><td>anatomical structure development</td><td>19/200</td><td>2.12</td><td>6.93e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0006350</td><td>transcription</td><td>19/200</td><td>1.86</td><td>3.25e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0044249</td><td>cellular biosynthetic process</td><td>41/200</td><td>1.46</td><td>4.69e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0010556</td><td>regulation of macromolecule biosynthetic process</td><td>18/200</td><td>1.83</td><td>4.86e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0009058</td><td>biosynthetic process</td><td>42/200</td><td>1.44</td><td>5.08e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0006139</td><td>nucleobase, nucleoside, nucleotide and nucleic acid metabolic process</td><td>27/200</td><td>1.60</td><td>5.58e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0019219</td><td>regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process</td><td>18/200</td><td>1.80</td><td>5.83e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0009889</td><td>regulation of biosynthetic process</td><td>18/200</td><td>1.79</td><td>5.94e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0031326</td><td>regulation of cellular biosynthetic process</td><td>18/200</td><td>1.79</td><td>5.94e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0031323</td><td>regulation of cellular metabolic process</td><td>19/200</td><td>1.76</td><td>6.12e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0051171</td><td>regulation of nitrogen compound metabolic process</td><td>18/200</td><td>1.78</td><td>6.47e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0090304</td><td>nucleic acid metabolic process</td><td>24/200</td><td>1.60</td><td>8.50e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0080090</td><td>regulation of primary metabolic process</td><td>18/200</td><td>1.71</td><td>9.60e-03</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0005622</td><td>intracellular</td><td>87/200</td><td>1.63</td><td>8.10e-08</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0044424</td><td>intracellular part</td><td>82/200</td><td>1.61</td><td>5.16e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0043229</td><td>intracellular organelle</td><td>73/200</td><td>1.58</td><td>6.28e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>5</td><td>GO:0005739</td><td>mitochondrion</td><td>19/200</td><td>2.97</td><td>7.44e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>4</td><td>GO:0043231</td><td>intracellular membrane-bounded organelle</td><td>69/200</td><td>1.57</td><td>1.61e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>3</td><td>GO:0043227</td><td>membrane-bounded organelle</td><td>69/200</td><td>1.57</td><td>1.62e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>5</td><td>GO:0005634</td><td>nucleus</td><td>30/200</td><td>1.92</td><td>1.95e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>4</td><td>GO:0044444</td><td>cytoplasmic part</td><td>50/200</td><td>1.44</td><td>2.36e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>3</td><td>GO:0043234</td><td>protein complex</td><td>14/200</td><td>2.14</td><td>2.55e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>4</td><td>GO:0005737</td><td>cytoplasm</td><td>52/200</td><td>1.39</td><td>4.20e-03</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FFFFFF><td>M</td><td>3</td><td>GO:0003676</td><td>nucleic acid binding</td><td>37/200</td><td>1.56</td><td>2.22e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>3</td><td>GO:0005515</td><td>protein binding</td><td>25/200</td><td>1.60</td><td>7.41e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>5</td><td>GO:0046872</td><td>metal ion binding</td><td>22/200</td><td>1.62</td><td>9.34e-03</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0000037</td><td>shoot apex</td><td>147/200</td><td>1.71</td><td>4.99e-19</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>5</td><td>PO:0009052</td><td>pedicel</td><td>139/200</td><td>1.71</td><td>3.82e-17</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>3</td><td>PO:0009005</td><td>root</td><td>146/200</td><td>1.62</td><td>2.24e-16</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>5</td><td>PO:0008034</td><td>leaf whorl</td><td>150/200</td><td>1.59</td><td>2.33e-16</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0008033</td><td>phyllome whorl</td><td>150/200</td><td>1.59</td><td>2.33e-16</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>3</td><td>PO:0009031</td><td>sepal</td><td>147/200</td><td>1.59</td><td>1.02e-15</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>3</td><td>PO:0006001</td><td>phyllome</td><td>156/200</td><td>1.52</td><td>1.40e-15</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>3</td><td>PO:0009010</td><td>seed</td><td>151/200</td><td>1.54</td><td>3.62e-15</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0009001</td><td>fruit</td><td>151/200</td><td>1.54</td><td>6.33e-15</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>3</td><td>PO:0006342</td><td>infructescence</td><td>151/200</td><td>1.54</td><td>6.33e-15</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009006</td><td>shoot</td><td>160/200</td><td>1.47</td><td>6.43e-15</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009046</td><td>flower</td><td>156/200</td><td>1.50</td><td>7.06e-15</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009028</td><td>microsporophyll</td><td>137/200</td><td>1.63</td><td>8.33e-15</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009027</td><td>megasporophyll</td><td>137/200</td><td>1.63</td><td>9.35e-15</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009009</td><td>embryo</td><td>149/200</td><td>1.54</td><td>1.05e-14</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009049</td><td>inflorescence</td><td>156/200</td><td>1.49</td><td>1.38e-14</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009047</td><td>stem</td><td>137/200</td><td>1.62</td><td>1.47e-14</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009032</td><td>petal</td><td>140/200</td><td>1.60</td><td>1.88e-14</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009025</td><td>leaf</td><td>143/200</td><td>1.55</td><td>6.82e-14</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009026</td><td>sporophyll</td><td>141/200</td><td>1.57</td><td>7.94e-14</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0020039</td><td>leaf lamina</td><td>132/200</td><td>1.60</td><td>4.18e-13</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0008037</td><td>seedling</td><td>137/200</td><td>1.55</td><td>9.64e-13</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0000013</td><td>cauline leaf</td><td>125/200</td><td>1.62</td><td>2.44e-12</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0020038</td><td>petiole</td><td>123/200</td><td>1.62</td><td>5.60e-12</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009013</td><td>meristem</td><td>126/200</td><td>1.57</td><td>2.13e-11</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0000230</td><td>inflorescence meristem</td><td>123/200</td><td>1.58</td><td>2.75e-11</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0020091</td><td>male gametophyte</td><td>126/200</td><td>1.52</td><td>2.54e-10</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0000084</td><td>sperm cell</td><td>66/200</td><td>2.03</td><td>1.47e-09</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0020097</td><td>generative cell</td><td>66/200</td><td>2.03</td><td>1.47e-09</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0020030</td><td>cotyledon</td><td>111/200</td><td>1.51</td><td>2.09e-08</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>4</td><td>PO:0006345</td><td>pollen tube</td><td>48/200</td><td>1.65</td><td>1.38e-04</td><td>-</td><td>yes</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>PG</td><td>5</td><td>PO:0001078</td><td>E expanded cotyledon stage</td><td>144/200</td><td>1.73</td><td>5.40e-19</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>5</td><td>PO:0004507</td><td>D bilateral stage</td><td>143/200</td><td>1.74</td><td>8.92e-19</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>5</td><td>PO:0001081</td><td>F mature embryo stage</td><td>140/200</td><td>1.76</td><td>1.15e-18</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>5</td><td>PO:0001185</td><td>C globular stage</td><td>141/200</td><td>1.72</td><td>7.86e-18</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>4</td><td>PO:0007631</td><td>embryo development stages</td><td>148/200</td><td>1.64</td><td>1.96e-17</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>3</td><td>PO:0001170</td><td>seed development stages</td><td>148/200</td><td>1.64</td><td>3.14e-17</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>4</td><td>PO:0007616</td><td>4 anthesis</td><td>152/200</td><td>1.57</td><td>4.05e-16</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>5</td><td>PO:0007604</td><td>corolla developmental stages</td><td>153/200</td><td>1.55</td><td>8.38e-16</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>3</td><td>PO:0007615</td><td>flower development stages</td><td>158/200</td><td>1.51</td><td>1.25e-15</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>4</td><td>PO:0007600</td><td>3 floral organ development stages</td><td>155/200</td><td>1.52</td><td>2.33e-15</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0007133</td><td>leaf production</td><td>137/200</td><td>1.63</td><td>1.12e-14</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007112</td><td>1 main shoot growth</td><td>137/200</td><td>1.63</td><td>1.15e-14</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0007134</td><td>A vegetative growth</td><td>137/200</td><td>1.62</td><td>2.18e-14</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0001054</td><td>4 leaf senescence stage</td><td>125/200</td><td>1.63</td><td>1.71e-12</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0001050</td><td>leaf development stages</td><td>125/200</td><td>1.62</td><td>1.79e-12</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0007605</td><td>androecium developmental stages</td><td>53/200</td><td>1.81</td><td>3.91e-06</td><td>-</td><td>yes</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>development</td><td>-</td><td>24/200</td><td>3.44</td><td>3.80e-08</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>embryonic</td><td>-</td><td>11/200</td><td>5.12</td><td>1.96e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>dormancy</td><td>-</td><td>10/200</td><td>5.28</td><td>3.67e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>finger</td><td>-</td><td>23/200</td><td>2.49</td><td>1.98e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>mitochondrion</td><td>-</td><td>16/200</td><td>2.92</td><td>4.10e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>nucleus</td><td>-</td><td>27/200</td><td>2.09</td><td>9.28e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>cellular_component</td><td>-</td><td>68/200</td><td>1.40</td><td>8.04e-04</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>containing</td><td>-</td><td>29/200</td><td>1.74</td><td>1.22e-03</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT3G30380&keyword=containing">3.00E-105</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>transcription</td><td>-</td><td>26/200</td><td>1.79</td><td>1.37e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>intracellular</td><td>-</td><td>12/200</td><td>2.33</td><td>2.19e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>subunit</td><td>-</td><td>15/200</td><td>2.05</td><td>3.00e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>synthase</td><td>-</td><td>10/200</td><td>2.28</td><td>4.91e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>molecular_function</td><td>-</td><td>66/200</td><td>1.31</td><td>5.43e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>regulation</td><td>-</td><td>22/200</td><td>1.66</td><td>6.91e-03</td><td>-</td><td>no</td></tr></table><table><tr><td valign=top>(*1)</td><td>[B]:Biological process(Gene ontology), [C]:Cellular component(Gene ontology), [M]:Molecular function(Gene ontology), [PS]:Plant Structure(Plant ontology), [PG]:Growth and developmental stages(Plant ontology), [KW]:words found in gene description.</td></tr><tr><td valign=top>(*2)</td><td>([# of genes with the term] / [# of sampling (200)]) / ([# of genes with the term among whole genes] / [# of whole genes]) </td></tr><tr><td valign=top>(*3)</td><td>P-values were calculated on hypergeometric distribution in which we found <i>n</i> genes with a annotation term during 200 highly correlated genes, while we had <i>N</i> genes with the term in the whole genes.</td></tr><tr><td valign=top>(*4)</td><td><a href="http://omicspace.riken.jp/PosMed-plus/">PosMed</a> is a system which serve a p-values showing a relationship between the gene and the annotation term based on literature information and Gene-Gene interaction suchas co-expression or protein-protein interactions.</td></tr></table><hr><a href="/db/SciNetS_ria227i/cria227s904i">Top Page</a></body></html>
OMAT3P011120