OMAT4P109690
0.6892639999999999878
<html><body><title>OMAT4P109690</title>(↑ Click "Links", if this line appears at the beginning.)<br><H1>Other supporting information</H1><table><tr><td colspan="2" align="left"><b>Gene Model</b><br></td></tr><tr><td NOWRAP width="75"></td><td NOWRAP><img src="/dbfiles/SciNetS_ria227i/cria227s1i/cria227s1ria227u401096900000i/OMAT4P109690.gene_models.png" width="717"><br></td></tr><tr><td colspan=2 align="left"><b>Correlation Plot</b><br></td></tr><tr><td NOWRAP colspan="2" align="left"><img src="/dbfiles/SciNetS_ria227i/cria227s1i/cria227s1ria227u401096900000i/OMAT4P109690.CorrPlot.jpg" width="800"><br><br></td></tr></table><hr><b>Expression profile (Values are plotted in Log(2) values.)</b><br><img src="/dbfiles/SciNetS_ria227i/cria227s1i/cria227s1ria227u401096900000i/OMAT4P109690.F0.Expression.png"><br><hr><b>Genes with related expresssion profiles.</b><br><table border=1><tr><th colspan=7 align="left">Positively Correlated Genes</th></tr><tr><th>Gens</th><th>PCC</th><th>Definition</th><th>Overlap gene</th><th>Definition</th><th>Overlap gene(antisense)</th><th>Definition</th></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u100110400000i">OMAT1P011040</a></td><td>0.957293</td><td>-</td><td>AT1G31580</td><td>ECS1</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u100043000000i">OMAT1P004300</a></td><td>0.937104</td><td>-</td><td>AT1G12250</td><td>thylakoid lumenal protein-related</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u501153800000i">OMAT5P115380</a></td><td>0.929203</td><td>-</td><td>AT5G58260</td><td>Encodes subunit NDH-N of NAD(P)H:plastoquinone dehydrogenase complex (Ndh complex) present in the thylakoid membrane of chloroplasts. This subunit is thought to be required for Ndh complex assembly.</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u100112400000i">OMAT1P011240</a></td><td>0.925456</td><td>-</td><td>AT1G32060</td><td>PRK (PHOSPHORIBULOKINASE)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u400036400000i">OMAT4P003640</a></td><td>0.923795</td><td>-</td><td>AT4G13670</td><td>PTAC5 (PLASTID TRANSCRIPTIONALLY ACTIVE5)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u300147900000i">OMAT3P014790</a></td><td>0.921741</td><td>-</td><td>AT3G54050</td><td>fructose-1,6-bisphosphatase, putative / D-fructose-1,6-bisphosphate 1-phosphohydrolase, putative / FBPase, putative</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u201035100000i">OMAT2P103510</a></td><td>0.918601</td><td>-</td><td>AT2G21370</td><td>xylulose kinase, putative</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u301042100000i">OMAT3P104210</a></td><td>0.916694</td><td>-</td><td>AT3G12780</td><td>PGK1 (PHOSPHOGLYCERATE KINASE 1)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u101166300000i">OMAT1P116630</a></td><td>0.916599</td><td>-</td><td>AT1G66980</td><td>protein kinase family protein / glycerophosphoryl diester phosphodiesterase family protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u101075600000i">OMAT1P107560</a></td><td>0.916243</td><td>-</td><td>AT1G23360</td><td>UbiE/COQ5 methyltransferase family protein</td><td>-</td><td>-</td></tr><tr><th colspan=7 align="left">Negatively Correlated Genes</th></tr><tr><th>Gens</th><th>PCC</th><th>Definition</th><th>Overlap gene</th><th>Definition</th><th>Overlap gene(antisense)</th><th>Definition</th></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u400020400000i">OMAT4P002040</a></td><td>-0.796231</td><td>-</td><td>AT4G08290</td><td>nodulin MtN21 family protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u300087600000i">OMAT3P008760</a></td><td>-0.786936</td><td>-</td><td>AT3G23180</td><td>FUNCTIONS IN: molecular_function unknown</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u200095300000i">OMAT2P009530</a></td><td>-0.781782</td><td>-</td><td>AT2G37110</td><td>unknown protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u200056000000i">OMAT2P005600</a></td><td>-0.781594</td><td>-</td><td>AT2G26230</td><td>uricase / urate oxidase / nodulin 35, putative</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u500015400000i">OMAT5P001540</a></td><td>-0.781218</td><td>-</td><td>AT5G04910</td><td>unknown protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u401102000000i">OMAT4P110200</a></td><td>-0.777001</td><td>-</td><td>AT4G34860</td><td>beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u200126100000i">OMAT2P012610</a></td><td>-0.776827</td><td>-</td><td>AT2G45140</td><td>PVA12 (PLANT VAP HOMOLOG 12)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u200028500000i">OMAT2P002850</a></td><td>-0.767562</td><td>-</td><td>AT2G18240</td><td>RER1 protein, putative</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u500198250000i">OMAT5P019825</a></td><td>-0.765789</td><td>-</td><td>AT5G64400</td><td>unknown protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u300114700000i">OMAT3P011470</a></td><td>-0.762647</td><td>-</td><td>AT3G44320</td><td>NIT3 (NITRILASE 3)</td><td>-</td><td>-</td></tr></table><br><a href="/dbfiles/SciNetS_ria227i/cria227s1i/cria227s1ria227u401096900000i/OMAT4P109690-correlation.txt">Get whole results</a><br><br> <HR><b>Over-Representation Analysis Result</b><br><br><table border="1"><tr bgcolor=#FF69B4><td></td><td><i>p</i>-value</td><td> <= 2.67e-63</td><td>:20 terms with high significance</td></a></tr><tr bgcolor=#FFFACD><td>2.67e-63 < </td><td><i>p</i>-value</td><td> <= 8.76e-06</td><td> :With considering multiple testing correction;<br><i>p</i> <= 1.00e-02 / 1142</td></tr><tr bgcolor=#FFFFFF><td>8.76e-06 < </td><td><i>p</i>-value</td><td> <= 1.00e-02</td><td></td></tr></table><br><table border="1"><tr><th>Type of term (*1)</th><th>Depth of the term in ontology tree</th><th>ID/Term</th><th>Description</th><th>Number of genes</th><th>Over-Representative rate (*2)</th><th><i>p</i>-value (*3)</th><th>PosMed <i>p</i>-value (*4)<br> (Link to PosMed)</th><th>Found on gene annotation</th></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0015979</td><td>photosynthesis</td><td>32/200</td><td>40.01</td><td>3.60e-44</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0006091</td><td>generation of precursor metabolites and energy</td><td>28/200</td><td>17.50</td><td>7.03e-28</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0055114</td><td>oxidation reduction</td><td>15/200</td><td>15.02</td><td>5.46e-15</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0005996</td><td>monosaccharide metabolic process</td><td>14/200</td><td>15.21</td><td>3.07e-14</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0006066</td><td>alcohol metabolic process</td><td>16/200</td><td>10.27</td><td>4.34e-13</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0051186</td><td>cofactor metabolic process</td><td>15/200</td><td>10.10</td><td>2.65e-12</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0044237</td><td>cellular metabolic process</td><td>91/200</td><td>1.93</td><td>3.15e-12</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0044281</td><td>small molecule metabolic process</td><td>34/200</td><td>3.78</td><td>4.95e-12</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0044282</td><td>small molecule catabolic process</td><td>14/200</td><td>9.46</td><td>3.08e-11</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0042440</td><td>pigment metabolic process</td><td>10/200</td><td>14.09</td><td>1.54e-10</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0042742</td><td>defense response to bacterium</td><td>12/200</td><td>10.08</td><td>2.65e-10</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0009617</td><td>response to bacterium</td><td>13/200</td><td>8.41</td><td>6.26e-10</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0018130</td><td>heterocycle biosynthetic process</td><td>10/200</td><td>11.71</td><td>1.13e-09</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0044262</td><td>cellular carbohydrate metabolic process</td><td>17/200</td><td>5.50</td><td>2.64e-09</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0051188</td><td>cofactor biosynthetic process</td><td>10/200</td><td>10.66</td><td>3.07e-09</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0044271</td><td>cellular nitrogen compound biosynthetic process</td><td>14/200</td><td>5.29</td><td>8.30e-08</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0046483</td><td>heterocycle metabolic process</td><td>14/200</td><td>5.17</td><td>1.11e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0042180</td><td>cellular ketone metabolic process</td><td>18/200</td><td>4.01</td><td>1.49e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0009416</td><td>response to light stimulus</td><td>14/200</td><td>4.87</td><td>2.40e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0051707</td><td>response to other organism</td><td>15/200</td><td>4.48</td><td>3.09e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0005975</td><td>carbohydrate metabolic process</td><td>19/200</td><td>3.65</td><td>3.28e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0009314</td><td>response to radiation</td><td>14/200</td><td>4.71</td><td>3.65e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0009628</td><td>response to abiotic stimulus</td><td>23/200</td><td>3.10</td><td>4.55e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0043436</td><td>oxoacid metabolic process</td><td>17/200</td><td>3.86</td><td>5.35e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0006082</td><td>organic acid metabolic process</td><td>17/200</td><td>3.85</td><td>5.56e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0009607</td><td>response to biotic stimulus</td><td>15/200</td><td>4.15</td><td>8.40e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0010038</td><td>response to metal ion</td><td>12/200</td><td>5.00</td><td>1.03e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0010035</td><td>response to inorganic substance</td><td>13/200</td><td>4.56</td><td>1.25e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0006520</td><td>cellular amino acid metabolic process</td><td>11/200</td><td>5.23</td><td>1.60e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0009056</td><td>catabolic process</td><td>17/200</td><td>3.56</td><td>1.67e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0044106</td><td>cellular amine metabolic process</td><td>11/200</td><td>4.84</td><td>3.52e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0006952</td><td>defense response</td><td>16/200</td><td>3.51</td><td>3.78e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0009308</td><td>amine metabolic process</td><td>11/200</td><td>4.40</td><td>9.27e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0006950</td><td>response to stress</td><td>26/200</td><td>2.10</td><td>1.19e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0006519</td><td>cellular amino acid and derivative metabolic process</td><td>11/200</td><td>3.16</td><td>2.16e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0006996</td><td>organelle organization</td><td>10/200</td><td>3.00</td><td>5.80e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0034641</td><td>cellular nitrogen compound metabolic process</td><td>33/200</td><td>1.70</td><td>9.30e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0006807</td><td>nitrogen compound metabolic process</td><td>33/200</td><td>1.66</td><td>1.30e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0044238</td><td>primary metabolic process</td><td>66/200</td><td>1.33</td><td>3.41e-03</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>C</td><td>5</td><td>GO:0009536</td><td>plastid</td><td>159/200</td><td>8.61</td><td>3.35e-127</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G33500&keyword=plastid">3.64E-21</a></td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>4</td><td>GO:0044435</td><td>plastid part</td><td>107/200</td><td>18.81</td><td>1.04e-112</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>C</td><td>5</td><td>GO:0044434</td><td>chloroplast part</td><td>106/200</td><td>19.14</td><td>2.38e-112</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>C</td><td>4</td><td>GO:0009579</td><td>thylakoid</td><td>77/200</td><td>30.93</td><td>2.56e-96</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>C</td><td>4</td><td>GO:0044436</td><td>thylakoid part</td><td>68/200</td><td>32.96</td><td>1.09e-86</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>C</td><td>4</td><td>GO:0044444</td><td>cytoplasmic part</td><td>161/200</td><td>4.64</td><td>1.10e-86</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>5</td><td>GO:0031976</td><td>plastid thylakoid</td><td>67/200</td><td>33.66</td><td>4.78e-86</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>C</td><td>4</td><td>GO:0031984</td><td>organelle subcompartment</td><td>67/200</td><td>33.45</td><td>7.50e-86</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>C</td><td>4</td><td>GO:0005737</td><td>cytoplasm</td><td>162/200</td><td>4.33</td><td>7.27e-83</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>5</td><td>GO:0042651</td><td>thylakoid membrane</td><td>61/200</td><td>33.70</td><td>3.44e-78</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>C</td><td>4</td><td>GO:0034357</td><td>photosynthetic membrane</td><td>61/200</td><td>33.26</td><td>8.45e-78</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>C</td><td>5</td><td>GO:0055035</td><td>plastid thylakoid membrane</td><td>60/200</td><td>34.64</td><td>1.09e-77</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>C</td><td>4</td><td>GO:0043231</td><td>intracellular membrane-bounded organelle</td><td>162/200</td><td>3.69</td><td>4.62e-72</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>3</td><td>GO:0043227</td><td>membrane-bounded organelle</td><td>162/200</td><td>3.69</td><td>4.71e-72</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>3</td><td>GO:0044446</td><td>intracellular organelle part</td><td>108/200</td><td>7.53</td><td>1.13e-70</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>C</td><td>3</td><td>GO:0044422</td><td>organelle part</td><td>108/200</td><td>7.53</td><td>1.23e-70</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>C</td><td>3</td><td>GO:0043229</td><td>intracellular organelle</td><td>162/200</td><td>3.51</td><td>1.01e-68</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>3</td><td>GO:0044424</td><td>intracellular part</td><td>163/200</td><td>3.20</td><td>2.67e-63</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0005622</td><td>intracellular</td><td>163/200</td><td>3.06</td><td>2.04e-60</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>5</td><td>GO:0009526</td><td>plastid envelope</td><td>57/200</td><td>20.74</td><td>5.60e-60</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>4</td><td>GO:0031967</td><td>organelle envelope</td><td>58/200</td><td>13.92</td><td>1.11e-50</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0031975</td><td>envelope</td><td>58/200</td><td>13.92</td><td>1.11e-50</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>5</td><td>GO:0009532</td><td>plastid stroma</td><td>45/200</td><td>18.21</td><td>1.12e-44</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0044464</td><td>cell part</td><td>175/200</td><td>1.91</td><td>3.36e-36</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0016020</td><td>membrane</td><td>87/200</td><td>3.18</td><td>1.20e-25</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0048046</td><td>apoplast</td><td>28/200</td><td>14.19</td><td>3.05e-25</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0043234</td><td>protein complex</td><td>26/200</td><td>3.97</td><td>5.11e-10</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0044425</td><td>membrane part</td><td>24/200</td><td>3.03</td><td>4.03e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>5</td><td>GO:0005739</td><td>mitochondrion</td><td>14/200</td><td>2.19</td><td>2.06e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>3</td><td>GO:0043228</td><td>non-membrane-bounded organelle</td><td>12/200</td><td>2.01</td><td>7.25e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>4</td><td>GO:0043232</td><td>intracellular non-membrane-bounded organelle</td><td>12/200</td><td>2.01</td><td>7.25e-03</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FFFACD><td>M</td><td>3</td><td>GO:0016491</td><td>oxidoreductase activity</td><td>27/200</td><td>3.20</td><td>2.70e-08</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>4</td><td>GO:0022891</td><td>substrate-specific transmembrane transporter activity</td><td>10/200</td><td>2.27</td><td>5.06e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>3</td><td>GO:0022892</td><td>substrate-specific transporter activity</td><td>11/200</td><td>2.13</td><td>6.07e-03</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0020038</td><td>petiole</td><td>184/200</td><td>2.42</td><td>1.33e-59</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0020030</td><td>cotyledon</td><td>181/200</td><td>2.47</td><td>1.51e-58</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0020039</td><td>leaf lamina</td><td>185/200</td><td>2.24</td><td>9.45e-55</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0000013</td><td>cauline leaf</td><td>181/200</td><td>2.34</td><td>9.64e-55</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009013</td><td>meristem</td><td>183/200</td><td>2.28</td><td>3.30e-54</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0000230</td><td>inflorescence meristem</td><td>179/200</td><td>2.30</td><td>5.76e-52</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009047</td><td>stem</td><td>182/200</td><td>2.16</td><td>2.44e-49</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009028</td><td>microsporophyll</td><td>181/200</td><td>2.16</td><td>1.24e-48</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009052</td><td>pedicel</td><td>178/200</td><td>2.19</td><td>1.55e-47</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009032</td><td>petal</td><td>182/200</td><td>2.08</td><td>1.70e-46</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009025</td><td>leaf</td><td>185/200</td><td>2.01</td><td>2.31e-46</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009027</td><td>megasporophyll</td><td>179/200</td><td>2.13</td><td>2.62e-46</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0000037</td><td>shoot apex</td><td>180/200</td><td>2.09</td><td>1.28e-45</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0008037</td><td>seedling</td><td>181/200</td><td>2.05</td><td>7.51e-45</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009026</td><td>sporophyll</td><td>181/200</td><td>2.01</td><td>2.02e-43</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009031</td><td>sepal</td><td>182/200</td><td>1.97</td><td>1.31e-42</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0008034</td><td>leaf whorl</td><td>181/200</td><td>1.92</td><td>5.04e-40</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0008033</td><td>phyllome whorl</td><td>181/200</td><td>1.92</td><td>5.04e-40</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009009</td><td>embryo</td><td>182/200</td><td>1.88</td><td>2.63e-39</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009010</td><td>seed</td><td>182/200</td><td>1.86</td><td>2.13e-38</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0006001</td><td>phyllome</td><td>185/200</td><td>1.80</td><td>4.00e-38</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009001</td><td>fruit</td><td>182/200</td><td>1.85</td><td>5.10e-38</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0006342</td><td>infructescence</td><td>182/200</td><td>1.85</td><td>5.10e-38</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009046</td><td>flower</td><td>182/200</td><td>1.75</td><td>6.10e-34</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009006</td><td>shoot</td><td>185/200</td><td>1.70</td><td>7.10e-34</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009049</td><td>inflorescence</td><td>182/200</td><td>1.74</td><td>1.65e-33</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0020091</td><td>male gametophyte</td><td>162/200</td><td>1.95</td><td>2.75e-31</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0000293</td><td>guard cell</td><td>61/200</td><td>5.67</td><td>1.87e-30</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0000351</td><td>guard mother cell</td><td>61/200</td><td>5.64</td><td>2.40e-30</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0000070</td><td>meristemoid</td><td>61/200</td><td>5.63</td><td>2.63e-30</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0006016</td><td>leaf epidermis</td><td>61/200</td><td>5.49</td><td>1.16e-29</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0006035</td><td>shoot epidermis</td><td>61/200</td><td>5.45</td><td>1.70e-29</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0000349</td><td>epidermal initial</td><td>61/200</td><td>5.41</td><td>2.50e-29</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0004011</td><td>initial cell</td><td>61/200</td><td>5.38</td><td>3.54e-29</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0004010</td><td>meristematic cell</td><td>61/200</td><td>5.37</td><td>3.86e-29</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0004013</td><td>epidermal cell</td><td>62/200</td><td>5.20</td><td>7.17e-29</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0005679</td><td>epidermis</td><td>62/200</td><td>5.01</td><td>5.73e-28</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009014</td><td>dermal tissue</td><td>62/200</td><td>5.00</td><td>5.89e-28</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0001054</td><td>4 leaf senescence stage</td><td>181/200</td><td>2.35</td><td>4.55e-55</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0001050</td><td>leaf development stages</td><td>181/200</td><td>2.35</td><td>5.00e-55</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0001081</td><td>F mature embryo stage</td><td>178/200</td><td>2.24</td><td>4.07e-49</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0007133</td><td>leaf production</td><td>181/200</td><td>2.15</td><td>2.13e-48</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007112</td><td>1 main shoot growth</td><td>181/200</td><td>2.15</td><td>2.21e-48</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0007134</td><td>A vegetative growth</td><td>181/200</td><td>2.14</td><td>7.06e-48</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0004507</td><td>D bilateral stage</td><td>179/200</td><td>2.17</td><td>1.08e-47</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0001185</td><td>C globular stage</td><td>178/200</td><td>2.17</td><td>7.06e-47</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0001078</td><td>E expanded cotyledon stage</td><td>178/200</td><td>2.14</td><td>4.75e-46</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007631</td><td>embryo development stages</td><td>180/200</td><td>2.00</td><td>2.62e-42</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0001170</td><td>seed development stages</td><td>180/200</td><td>1.99</td><td>5.40e-42</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007616</td><td>4 anthesis</td><td>181/200</td><td>1.87</td><td>5.29e-38</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0007604</td><td>corolla developmental stages</td><td>181/200</td><td>1.83</td><td>1.03e-36</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007600</td><td>3 floral organ development stages</td><td>181/200</td><td>1.78</td><td>1.88e-34</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0007615</td><td>flower development stages</td><td>181/200</td><td>1.73</td><td>1.75e-32</td><td>-</td><td>yes</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>KW</td><td>0</td><td>chloroplast</td><td>-</td><td>144/200</td><td>8.15</td><td>3.47e-107</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>KW</td><td>0</td><td>thylakoid</td><td>-</td><td>58/200</td><td>27.24</td><td>2.17e-68</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>photosystem</td><td>-</td><td>27/200</td><td>44.89</td><td>3.18e-39</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>components</td><td>-</td><td>32/200</td><td>19.71</td><td>2.58e-33</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>envelope</td><td>-</td><td>34/200</td><td>14.88</td><td>5.67e-31</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>stroma</td><td>-</td><td>24/200</td><td>12.87</td><td>6.84e-21</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>dehydrogenase</td><td>-</td><td>25/200</td><td>8.62</td><td>2.37e-17</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>light</td><td>-</td><td>21/200</td><td>7.86</td><td>4.38e-14</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>electron</td><td>-</td><td>22/200</td><td>6.18</td><td>1.76e-12</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>membrane</td><td>-</td><td>64/200</td><td>2.40</td><td>2.12e-12</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>encodes</td><td>-</td><td>60/200</td><td>2.35</td><td>3.38e-11</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>process</td><td>-</td><td>50/200</td><td>2.44</td><td>5.85e-10</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>barrel</td><td>-</td><td>12/200</td><td>8.87</td><td>1.28e-09</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>bacterium</td><td>-</td><td>10/200</td><td>10.52</td><td>3.52e-09</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>ipr016040</td><td>-</td><td>14/200</td><td>6.50</td><td>5.47e-09</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>subunit</td><td>-</td><td>26/200</td><td>3.55</td><td>5.80e-09</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>complex</td><td>-</td><td>28/200</td><td>3.31</td><td>7.54e-09</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>catalytic</td><td>-</td><td>31/200</td><td>3.05</td><td>8.60e-09</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>apoplast</td><td>-</td><td>12/200</td><td>7.15</td><td>1.69e-08</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>phosphate</td><td>-</td><td>15/200</td><td>4.95</td><td>8.04e-08</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>oxidoreductase</td><td>-</td><td>18/200</td><td>3.86</td><td>2.67e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>plastid</td><td>-</td><td>10/200</td><td>6.62</td><td>4.03e-07</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G33500&keyword=plastid">3.64E-21</a></td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>enzyme</td><td>-</td><td>14/200</td><td>4.15</td><td>1.77e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>metabolic</td><td>-</td><td>27/200</td><td>2.35</td><td>1.20e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>required</td><td>-</td><td>10/200</td><td>4.57</td><td>1.43e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>pathway</td><td>-</td><td>11/200</td><td>4.09</td><td>1.89e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>biosynthetic</td><td>-</td><td>19/200</td><td>2.66</td><td>3.59e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>response</td><td>-</td><td>35/200</td><td>1.95</td><td>4.26e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>transporter</td><td>-</td><td>18/200</td><td>2.59</td><td>7.77e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>reductase</td><td>-</td><td>10/200</td><td>3.67</td><td>1.03e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>defense</td><td>-</td><td>11/200</td><td>3.15</td><td>2.23e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>putative</td><td>-</td><td>38/200</td><td>1.65</td><td>7.17e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>transport</td><td>-</td><td>20/200</td><td>2.06</td><td>7.94e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>atpase</td><td>-</td><td>10/200</td><td>2.84</td><td>9.03e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>class</td><td>-</td><td>14/200</td><td>2.34</td><td>1.08e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>region</td><td>-</td><td>26/200</td><td>1.80</td><td>1.27e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>synthase</td><td>-</td><td>11/200</td><td>2.51</td><td>1.65e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>carrier</td><td>-</td><td>10/200</td><td>2.49</td><td>2.50e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>alpha</td><td>-</td><td>15/200</td><td>2.06</td><td>2.86e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>dependent</td><td>-</td><td>23/200</td><td>1.72</td><td>4.06e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>stimulus</td><td>-</td><td>10/200</td><td>2.32</td><td>4.26e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>nucleotide</td><td>-</td><td>13/200</td><td>2.04</td><td>5.02e-03</td><td>-</td><td>no</td></tr></table><table><tr><td valign=top>(*1)</td><td>[B]:Biological process(Gene ontology), [C]:Cellular component(Gene ontology), [M]:Molecular function(Gene ontology), [PS]:Plant Structure(Plant ontology), [PG]:Growth and developmental stages(Plant ontology), [KW]:words found in gene description.</td></tr><tr><td valign=top>(*2)</td><td>([# of genes with the term] / [# of sampling (200)]) / ([# of genes with the term among whole genes] / [# of whole genes]) </td></tr><tr><td valign=top>(*3)</td><td>P-values were calculated on hypergeometric distribution in which we found <i>n</i> genes with a annotation term during 200 highly correlated genes, while we had <i>N</i> genes with the term in the whole genes.</td></tr><tr><td valign=top>(*4)</td><td><a href="http://omicspace.riken.jp/PosMed-plus/">PosMed</a> is a system which serve a p-values showing a relationship between the gene and the annotation term based on literature information and Gene-Gene interaction suchas co-expression or protein-protein interactions.</td></tr></table><hr><a href="/db/SciNetS_ria227i/cria227s904i">Top Page</a></body></html>
with_AGI_gene