0.85760999999999998344
with_AGI_gene
<html><body><title>OMAT5P103650</title>(↑ Click "Links", if this line appears at the beginning.)<br><H1>Other supporting information</H1><table><tr><td colspan="2" align="left"><b>Gene Model</b><br></td></tr><tr><td NOWRAP width="75"></td><td NOWRAP><img src="/dbfiles/SciNetS_ria227i/cria227s1i/cria227s1ria227u501036500000i/OMAT5P103650.gene_models.png" width="717"><br></td></tr><tr><td colspan=2 align="left"><b>Correlation Plot</b><br></td></tr><tr><td NOWRAP colspan="2" align="left"><img src="/dbfiles/SciNetS_ria227i/cria227s1i/cria227s1ria227u501036500000i/OMAT5P103650.CorrPlot.jpg" width="800"><br><br></td></tr></table><hr><b>Expression profile (Values are plotted in Log(2) values.)</b><br><img src="/dbfiles/SciNetS_ria227i/cria227s1i/cria227s1ria227u501036500000i/OMAT5P103650.F0.Expression.png"><br><hr><b>Genes with related expresssion profiles.</b><br><table border=1><tr><th colspan=7 align="left">Positively Correlated Genes</th></tr><tr><th>Gens</th><th>PCC</th><th>Definition</th><th>Overlap gene</th><th>Definition</th><th>Overlap gene(antisense)</th><th>Definition</th></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u201011800000i">OMAT2P101180</a></td><td>0.954838</td><td>-</td><td>AT2G05910</td><td>unknown protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u100236700000i">OMAT1P023670</a></td><td>0.947956</td><td>-</td><td>AT1G79330</td><td>ATMC5 (ARABIDOPSIS THALIANA METACASPASE 5)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u101035900000i">OMAT1P103590</a></td><td>0.945593</td><td>-</td><td>-</td><td>-</td><td>AT1G11170</td><td>unknown protein</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u300009300000i">OMAT3P000930</a></td><td>0.944628</td><td>-</td><td>AT3G02940</td><td>MYB107 (myb domain protein 107)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u101162000000i">OMAT1P116200</a></td><td>0.941377</td><td>-</td><td>AT1G65670</td><td>CYP702A1</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u101170300000i">OMAT1P117030</a></td><td>0.939049</td><td>-</td><td>AT1G68380</td><td>unknown protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u300052100000i">OMAT3P005210</a></td><td>0.938751</td><td>-</td><td>AT3G14630</td><td>CYP72A9</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u301012700000i">OMAT3P101270</a></td><td>0.938674</td><td>-</td><td>AT3G04170</td><td>germin-like protein, putative</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u501038400000i">OMAT5P103840</a></td><td>0.938467</td><td>-</td><td>AT5G13790</td><td>AGL15 (AGAMOUS-LIKE 15)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u500025600000i">OMAT5P002560</a></td><td>0.937358</td><td>-</td><td>AT5G07500</td><td>PEI1</td><td>-</td><td>-</td></tr><tr><th colspan=7 align="left">Negatively Correlated Genes</th></tr><tr><th>Gens</th><th>PCC</th><th>Definition</th><th>Overlap gene</th><th>Definition</th><th>Overlap gene(antisense)</th><th>Definition</th></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u101029900000i">OMAT1P102990</a></td><td>-0.785727</td><td>-</td><td>AT1G09620</td><td>ATP binding / aminoacyl-tRNA ligase/ leucine-tRNA ligase/ nucleotide binding</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u201124700000i">OMAT2P112470</a></td><td>-0.677015</td><td>-</td><td>AT2G47900</td><td>AtTLP3 (TUBBY LIKE PROTEIN 3)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u400023000000i">OMAT4P002300</a></td><td>-0.671944</td><td>-</td><td>AT4G09570</td><td>CPK4</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u101215300000i">OMAT1P121530</a></td><td>-0.666436</td><td>-</td><td>AT1G80930</td><td>MIF4G domain-containing protein / MA3 domain-containing protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u101030000000i">OMAT1P103000</a></td><td>-0.665806</td><td>-</td><td>AT1G09620</td><td>ATP binding / aminoacyl-tRNA ligase/ leucine-tRNA ligase/ nucleotide binding</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u400022000000i">OMAT4P002200</a></td><td>-0.662564</td><td>-</td><td>AT4G09000</td><td>14-3-3-like protein GF14 chi / general regulatory factor 1 (GRF1)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u100242000000i">OMAT1P024200</a></td><td>-0.651592</td><td>-</td><td>AT1G80770</td><td>PDE318 (pigment defective 318)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u301134500000i">OMAT3P113450</a></td><td>-0.632936</td><td>-</td><td>AT3G55400</td><td>OVA1 (OVULE ABORTION 1)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u300026000000i">OMAT3P002600</a></td><td>-0.620719</td><td>-</td><td>AT3G07270</td><td>GTP cyclohydrolase I</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u301111200000i">OMAT3P111120</a></td><td>-0.617676</td><td>-</td><td>AT3G48560</td><td>CSR1 (CHLORSULFURON/IMIDAZOLINONE RESISTANT 1)</td><td>-</td><td>-</td></tr></table><br><a href="/dbfiles/SciNetS_ria227i/cria227s1i/cria227s1ria227u501036500000i/OMAT5P103650-correlation.txt">Get whole results</a><br><br> <HR><b>Over-Representation Analysis Result</b><br><br><table border="1"><tr bgcolor=#FF69B4><td></td><td><i>p</i>-value</td><td> <= 1.00e-06</td><td>:20 terms with high significance</td></a></tr><tr bgcolor=#FFFACD><td>1.00e-06 < </td><td><i>p</i>-value</td><td> <= 8.76e-06</td><td> :With considering multiple testing correction;<br><i>p</i> <= 1.00e-02 / 1142</td></tr><tr bgcolor=#FFFFFF><td>8.76e-06 < </td><td><i>p</i>-value</td><td> <= 1.00e-02</td><td></td></tr></table><br><table border="1"><tr><th>Type of term (*1)</th><th>Depth of the term in ontology tree</th><th>ID/Term</th><th>Description</th><th>Number of genes</th><th>Over-Representative rate (*2)</th><th><i>p</i>-value (*3)</th><th>PosMed <i>p</i>-value (*4)<br> (Link to PosMed)</th><th>Found on gene annotation</th></tr><tr bgcolor=#FF69B4><td>B</td><td>4</td><td>GO:0006629</td><td>lipid metabolic process</td><td>21/200</td><td>4.83</td><td>5.76e-10</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>B</td><td>4</td><td>GO:0044255</td><td>cellular lipid metabolic process</td><td>15/200</td><td>5.58</td><td>1.54e-08</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>B</td><td>4</td><td>GO:0008610</td><td>lipid biosynthetic process</td><td>13/200</td><td>5.92</td><td>5.38e-08</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>B</td><td>3</td><td>GO:0019748</td><td>secondary metabolic process</td><td>13/200</td><td>5.61</td><td>1.04e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0016053</td><td>organic acid biosynthetic process</td><td>11/200</td><td>5.08</td><td>2.14e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0043436</td><td>oxoacid metabolic process</td><td>15/200</td><td>3.41</td><td>1.03e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0006082</td><td>organic acid metabolic process</td><td>15/200</td><td>3.40</td><td>1.06e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0042180</td><td>cellular ketone metabolic process</td><td>15/200</td><td>3.34</td><td>1.30e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0044283</td><td>small molecule biosynthetic process</td><td>13/200</td><td>2.86</td><td>2.09e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0005975</td><td>carbohydrate metabolic process</td><td>13/200</td><td>2.50</td><td>8.12e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0044281</td><td>small molecule metabolic process</td><td>18/200</td><td>2.00</td><td>1.78e-03</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>C</td><td>3</td><td>GO:0012505</td><td>endomembrane system</td><td>76/200</td><td>3.13</td><td>1.50e-21</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>3</td><td>GO:0044464</td><td>cell part</td><td>133/200</td><td>1.45</td><td>1.01e-09</td><td>-</td><td>yes</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>M</td><td>3</td><td>GO:0016491</td><td>oxidoreductase activity</td><td>29/200</td><td>3.44</td><td>1.67e-09</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>4</td><td>GO:0043169</td><td>cation binding</td><td>29/200</td><td>2.02</td><td>1.02e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>3</td><td>GO:0043167</td><td>ion binding</td><td>29/200</td><td>2.02</td><td>1.02e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>5</td><td>GO:0046872</td><td>metal ion binding</td><td>26/200</td><td>1.92</td><td>4.99e-04</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>KW</td><td>0</td><td>system</td><td>-</td><td>76/200</td><td>3.14</td><td>1.27e-21</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>KW</td><td>0</td><td>endomembrane</td><td>-</td><td>75/200</td><td>3.17</td><td>1.33e-21</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>KW</td><td>0</td><td>anthesis</td><td>-</td><td>48/200</td><td>3.65</td><td>5.62e-16</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>KW</td><td>0</td><td>stage</td><td>-</td><td>57/200</td><td>2.94</td><td>1.03e-14</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>KW</td><td>0</td><td>petal</td><td>-</td><td>42/200</td><td>2.88</td><td>1.14e-10</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>KW</td><td>0</td><td>expansion</td><td>-</td><td>42/200</td><td>2.86</td><td>1.44e-10</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>KW</td><td>0</td><td>differentiation</td><td>-</td><td>42/200</td><td>2.78</td><td>3.46e-10</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>KW</td><td>0</td><td>globular</td><td>-</td><td>19/200</td><td>5.06</td><td>1.51e-09</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>process</td><td>-</td><td>41/200</td><td>2.00</td><td>5.02e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>metabolic</td><td>-</td><td>27/200</td><td>2.35</td><td>1.20e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>carrier</td><td>-</td><td>14/200</td><td>3.49</td><td>1.41e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>inhibitor</td><td>-</td><td>11/200</td><td>3.68</td><td>5.27e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>synthase</td><td>-</td><td>13/200</td><td>2.96</td><td>1.48e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>enzyme</td><td>-</td><td>11/200</td><td>3.26</td><td>1.64e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>oxidoreductase</td><td>-</td><td>13/200</td><td>2.79</td><td>2.73e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>putative</td><td>-</td><td>39/200</td><td>1.69</td><td>3.64e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>hydrolase</td><td>-</td><td>17/200</td><td>2.33</td><td>4.14e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>lipid</td><td>-</td><td>10/200</td><td>2.91</td><td>7.32e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>biosynthetic</td><td>-</td><td>16/200</td><td>2.24</td><td>8.94e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>electron</td><td>-</td><td>10/200</td><td>2.81</td><td>9.80e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>leaves</td><td>-</td><td>12/200</td><td>2.42</td><td>1.52e-03</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>flower</td><td>-</td><td>16/200</td><td>2.09</td><td>1.82e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>carbohydrate</td><td>-</td><td>10/200</td><td>2.55</td><td>2.10e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>encodes</td><td>-</td><td>39/200</td><td>1.53</td><td>2.51e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>catalytic</td><td>-</td><td>19/200</td><td>1.87</td><td>3.10e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>transport</td><td>-</td><td>18/200</td><td>1.85</td><td>4.26e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>alpha</td><td>-</td><td>14/200</td><td>1.92</td><td>6.85e-03</td><td>-</td><td>no</td></tr></table><table><tr><td valign=top>(*1)</td><td>[B]:Biological process(Gene ontology), [C]:Cellular component(Gene ontology), [M]:Molecular function(Gene ontology), [KW]:words found in gene description.</td></tr><tr><td valign=top>(*2)</td><td>([# of genes with the term] / [# of sampling (200)]) / ([# of genes with the term among whole genes] / [# of whole genes]) </td></tr><tr><td valign=top>(*3)</td><td>P-values were calculated on hypergeometric distribution in which we found <i>n</i> genes with a annotation term during 200 highly correlated genes, while we had <i>N</i> genes with the term in the whole genes.</td></tr><tr><td valign=top>(*4)</td><td><a href="http://omicspace.riken.jp/PosMed-plus/">PosMed</a> is a system which serve a p-values showing a relationship between the gene and the annotation term based on literature information and Gene-Gene interaction suchas co-expression or protein-protein interactions.</td></tr></table><hr><a href="/db/SciNetS_ria227i/cria227s904i">Top Page</a></body></html>
OMAT5P103650