AT2G46990.1
<html><body><title>AT2G46990.1</title>(↑ Click "Links", if this line appears at the beginning.)<br><H1>Other supporting information</H1><table><tr><td colspan="2" align="left"><b>Gene Model</b><br></td></tr><tr><td NOWRAP width="75"></td><td NOWRAP><img src="/dbfiles/SciNetS_ria227i/cria227s2i/cria227s2ria227u224699001000i/AT2G46990.1.gene_models.png" width="717"><br></td></tr><tr><td colspan=2 align="left"><b>Correlation Plot</b><br></td></tr><tr><td NOWRAP colspan="2" align="left"><img src="/dbfiles/SciNetS_ria227i/cria227s2i/cria227s2ria227u224699001000i/AT2G46990.1.CorrPlot.jpg" width="800"><br><br></td></tr></table><hr><b>Expression profile (Values are plotted in Log(2) values.)</b><br><img src="/dbfiles/SciNetS_ria227i/cria227s2i/cria227s2ria227u224699001000i/AT2G46990.1.F0.Expression.png"><br><hr><b>Genes with related expresssion profiles.</b><br><table border=1><tr><th colspan=7 align="left">Positively Correlated Genes</th></tr><tr><th>Gens</th><th>PCC</th><th>Definition</th><th>Overlap gene</th><th>Definition</th><th>Overlap gene(antisense)</th><th>Definition</th></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u224677001000i">AT2G46770.1</a></td><td>0.966986</td><td>EMB2301 (EMBRYO DEFECTIVE 2301)</td><td>OMAT2P112110</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u122216001000i">AT1G22160.1</a></td><td>0.950993</td><td>senescence-associated protein-related</td><td>OMAT1P008060</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u325901001000i">AT3G59010.1</a></td><td>0.947564</td><td>pectinesterase family protein</td><td>OMAT3P114640</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u526455201000i">AT5G64552.1</a></td><td>0.945173</td><td>CPuORF22 (Conserved peptide upstream open reading frame 22)</td><td>OMAT5P117630</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u526455001000i">AT5G64550.1</a></td><td>0.945173</td><td>loricrin-related</td><td>OMAT5P117630</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u321692001000i">AT3G16920.1</a></td><td>0.943627</td><td>chitinase</td><td>OMAT3P105720</td><td>-</td><td>OMAT3P006330</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u325340001000i">AT3G53400.1</a></td><td>0.943566</td><td>FUNCTIONS IN: molecular_function unknown</td><td>OMAT3P014550</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u325340201000i">AT3G53402.1</a></td><td>0.943566</td><td>CPuORF46 (Conserved peptide upstream open reading frame 46)</td><td>OMAT3P014550</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u325984501000i">AT3G59845.1</a></td><td>0.941804</td><td>NADP-dependent oxidoreductase, putative</td><td>OMAT3P114820</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u326191001000i">AT3G61910.1</a></td><td>0.941481</td><td>ANAC066 (ARABIDOPSIS NAC DOMAIN PROTEIN 66)</td><td>OMAT3P115390</td><td>-</td><td>-</td><td>-</td></tr><tr><th colspan=7 align="left">Negatively Correlated Genes</th></tr><tr><th>Gens</th><th>PCC</th><th>Definition</th><th>Overlap gene</th><th>Definition</th><th>Overlap gene(antisense)</th><th>Definition</th></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u526538001000i">AT5G65380.1</a></td><td>-0.731296</td><td>ripening-responsive protein, putative</td><td>OMAT5P117940</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u421488001000i">AT4G14880.1</a></td><td>-0.699592</td><td>OASA1 (O-ACETYLSERINE (THIOL) LYASE (OAS-TL) ISOFORM A1)</td><td>OMAT4P103400</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u125019001000i">AT1G50190.1</a></td><td>-0.69778</td><td>FUNCTIONS IN: molecular_function unknown</td><td>-</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u221814001000i">AT2G18140.1</a></td><td>-0.686251</td><td>peroxidase, putative</td><td>-</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u123309001000i">AT1G33090.1</a></td><td>-0.6759</td><td>MATE efflux family protein</td><td>-</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u523560201000i">AT5G35602.1</a></td><td>-0.66803</td><td>transposable element gene</td><td>-</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u524476001000i">AT5G44760.1</a></td><td>-0.665414</td><td>C2 domain-containing protein</td><td>-</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u220544101000i">AT2G05441.1</a></td><td>-0.661969</td><td>unknown pseudogene</td><td>-</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u522829501000i">AT5G28295.1</a></td><td>-0.6429</td><td>unknown protein</td><td>-</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u420862001000i">AT4G08620.1</a></td><td>-0.639094</td><td>SULTR1</td><td>-</td><td>-</td><td>-</td><td>-</td></tr></table><br><a href="/dbfiles/SciNetS_ria227i/cria227s2i/cria227s2ria227u224699001000i/AT2G46990.1-correlation.txt">Get whole results</a><br><br> <HR><b>Over-Representation Analysis Result</b><br><br><table border="1"><tr bgcolor=#FF69B4><td></td><td><i>p</i>-value</td><td> <= 2.74e-10</td><td>:20 terms with high significance</td></a></tr><tr bgcolor=#FFFACD><td>2.74e-10 < </td><td><i>p</i>-value</td><td> <= 8.76e-06</td><td> :With considering multiple testing correction;<br><i>p</i> <= 1.00e-02 / 1142</td></tr><tr bgcolor=#FFFFFF><td>8.76e-06 < </td><td><i>p</i>-value</td><td> <= 1.00e-02</td><td></td></tr></table><br><table border="1"><tr><th>Type of term (*1)</th><th>Depth of the term in ontology tree</th><th>ID/Term</th><th>Description</th><th>Number of genes</th><th>Over-Representative rate (*2)</th><th><i>p</i>-value (*3)</th><th>PosMed <i>p</i>-value (*4)<br> (Link to PosMed)</th><th>Found on gene annotation</th></tr><tr bgcolor=#FF69B4><td>B</td><td>5</td><td>GO:0044264</td><td>cellular polysaccharide metabolic process</td><td>12/200</td><td>14.05</td><td>4.01e-12</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>B</td><td>4</td><td>GO:0005976</td><td>polysaccharide metabolic process</td><td>12/200</td><td>12.79</td><td>1.33e-11</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0071669</td><td>plant-type cell wall organization or biogenesis</td><td>10/200</td><td>13.30</td><td>2.88e-10</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0034637</td><td>cellular carbohydrate biosynthetic process</td><td>10/200</td><td>7.66</td><td>9.36e-08</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0050794</td><td>regulation of cellular process</td><td>37/200</td><td>2.42</td><td>1.48e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0016051</td><td>carbohydrate biosynthetic process</td><td>10/200</td><td>5.98</td><td>1.10e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0080090</td><td>regulation of primary metabolic process</td><td>27/200</td><td>2.56</td><td>2.36e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0019219</td><td>regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process</td><td>26/200</td><td>2.59</td><td>2.88e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0009889</td><td>regulation of biosynthetic process</td><td>26/200</td><td>2.59</td><td>2.98e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0031326</td><td>regulation of cellular biosynthetic process</td><td>26/200</td><td>2.59</td><td>2.98e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0044262</td><td>cellular carbohydrate metabolic process</td><td>13/200</td><td>4.21</td><td>3.20e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0050789</td><td>regulation of biological process</td><td>37/200</td><td>2.14</td><td>3.22e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0051171</td><td>regulation of nitrogen compound metabolic process</td><td>26/200</td><td>2.57</td><td>3.48e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0031323</td><td>regulation of cellular metabolic process</td><td>27/200</td><td>2.50</td><td>3.91e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0010556</td><td>regulation of macromolecule biosynthetic process</td><td>25/200</td><td>2.54</td><td>6.41e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0019222</td><td>regulation of metabolic process</td><td>28/200</td><td>2.38</td><td>6.78e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0010468</td><td>regulation of gene expression</td><td>26/200</td><td>2.44</td><td>8.79e-06</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT2G46990&keyword=regulation%20gene%20expression">1.01E-15</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0006350</td><td>transcription</td><td>25/200</td><td>2.45</td><td>1.19e-05</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT2G46990&keyword=transcription">0</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0060255</td><td>regulation of macromolecule metabolic process</td><td>26/200</td><td>2.38</td><td>1.42e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0044249</td><td>cellular biosynthetic process</td><td>49/200</td><td>1.74</td><td>2.78e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0009058</td><td>biosynthetic process</td><td>50/200</td><td>1.72</td><td>3.32e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0034645</td><td>cellular macromolecule biosynthetic process</td><td>38/200</td><td>1.76</td><td>1.85e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0009059</td><td>macromolecule biosynthetic process</td><td>38/200</td><td>1.76</td><td>1.97e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0005975</td><td>carbohydrate metabolic process</td><td>14/200</td><td>2.69</td><td>2.58e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0051252</td><td>regulation of RNA metabolic process</td><td>14/200</td><td>2.68</td><td>2.68e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0032774</td><td>RNA biosynthetic process</td><td>14/200</td><td>2.56</td><td>4.39e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0006807</td><td>nitrogen compound metabolic process</td><td>34/200</td><td>1.71</td><td>6.54e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0044237</td><td>cellular metabolic process</td><td>66/200</td><td>1.40</td><td>9.49e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0006139</td><td>nucleobase, nucleoside, nucleotide and nucleic acid metabolic process</td><td>29/200</td><td>1.72</td><td>1.47e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0034641</td><td>cellular nitrogen compound metabolic process</td><td>32/200</td><td>1.64</td><td>1.82e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0090304</td><td>nucleic acid metabolic process</td><td>26/200</td><td>1.73</td><td>2.23e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0044238</td><td>primary metabolic process</td><td>66/200</td><td>1.33</td><td>3.41e-03</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FFFFFF><td>C</td><td>3</td><td>GO:0044464</td><td>cell part</td><td>111/200</td><td>1.21</td><td>2.24e-03</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>4</td><td>GO:0031224</td><td>intrinsic to membrane</td><td>11/200</td><td>2.05</td><td>8.07e-03</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FFFACD><td>M</td><td>3</td><td>GO:0003700</td><td>transcription factor activity</td><td>30/200</td><td>2.97</td><td>2.70e-08</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>M</td><td>4</td><td>GO:0003677</td><td>DNA binding</td><td>31/200</td><td>2.24</td><td>7.96e-06</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT2G46990&keyword=binding">2.00E-10</a></td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>4</td><td>GO:0016757</td><td>transferase activity, transferring glycosyl groups</td><td>10/200</td><td>3.43</td><td>1.86e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>3</td><td>GO:0003676</td><td>nucleic acid binding</td><td>38/200</td><td>1.60</td><td>1.20e-03</td><td>-</td><td>yes</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0000230</td><td>inflorescence meristem</td><td>148/200</td><td>1.90</td><td>1.02e-24</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>3</td><td>PO:0009013</td><td>meristem</td><td>148/200</td><td>1.84</td><td>5.23e-23</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT2G46990&keyword=meristem">5.93E-18</a></td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0009049</td><td>inflorescence</td><td>159/200</td><td>1.52</td><td>3.18e-16</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>5</td><td>PO:0009046</td><td>flower</td><td>158/200</td><td>1.52</td><td>5.75e-16</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>3</td><td>PO:0009006</td><td>shoot</td><td>160/200</td><td>1.47</td><td>6.43e-15</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>3</td><td>PO:0009015</td><td>vascular tissue</td><td>16/200</td><td>9.02</td><td>3.51e-12</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0005020</td><td>vascular bundle</td><td>17/200</td><td>8.22</td><td>4.00e-12</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>3</td><td>PO:0006001</td><td>phyllome</td><td>146/200</td><td>1.42</td><td>9.74e-11</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>3</td><td>PO:0000034</td><td>vascular system</td><td>19/200</td><td>5.82</td><td>1.37e-10</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0009001</td><td>fruit</td><td>141/200</td><td>1.43</td><td>2.74e-10</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>3</td><td>PO:0006342</td><td>infructescence</td><td>141/200</td><td>1.43</td><td>2.74e-10</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009009</td><td>embryo</td><td>139/200</td><td>1.44</td><td>3.86e-10</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009032</td><td>petal</td><td>130/200</td><td>1.48</td><td>4.93e-10</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009010</td><td>seed</td><td>139/200</td><td>1.42</td><td>1.11e-09</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0008034</td><td>leaf whorl</td><td>135/200</td><td>1.43</td><td>1.93e-09</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0008033</td><td>phyllome whorl</td><td>135/200</td><td>1.43</td><td>1.93e-09</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009047</td><td>stem</td><td>124/200</td><td>1.47</td><td>5.27e-09</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0008037</td><td>seedling</td><td>125/200</td><td>1.42</td><td>5.74e-08</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT2G46990&keyword=seedling">1.16E-17</a></td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009028</td><td>microsporophyll</td><td>119/200</td><td>1.42</td><td>1.89e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009025</td><td>leaf</td><td>125/200</td><td>1.36</td><td>9.00e-07</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT2G46990&keyword=leaf">1.43E-12</a></td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009026</td><td>sporophyll</td><td>123/200</td><td>1.37</td><td>9.41e-07</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009031</td><td>sepal</td><td>125/200</td><td>1.35</td><td>1.20e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>5</td><td>PO:0020039</td><td>leaf lamina</td><td>110/200</td><td>1.33</td><td>3.07e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>4</td><td>PO:0000037</td><td>shoot apex</td><td>110/200</td><td>1.28</td><td>2.49e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>5</td><td>PO:0000013</td><td>cauline leaf</td><td>100/200</td><td>1.29</td><td>4.10e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>5</td><td>PO:0009027</td><td>megasporophyll</td><td>106/200</td><td>1.26</td><td>6.51e-04</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>3</td><td>PO:0009005</td><td>root</td><td>110/200</td><td>1.22</td><td>1.78e-03</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT2G46990&keyword=root">1.43E-16</a></td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>5</td><td>PO:0009052</td><td>pedicel</td><td>100/200</td><td>1.23</td><td>2.99e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>3</td><td>PO:0020091</td><td>male gametophyte</td><td>101/200</td><td>1.22</td><td>3.97e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>5</td><td>PO:0020038</td><td>petiole</td><td>92/200</td><td>1.21</td><td>8.88e-03</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>PG</td><td>5</td><td>PO:0007604</td><td>corolla developmental stages</td><td>154/200</td><td>1.56</td><td>2.38e-16</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>4</td><td>PO:0007600</td><td>3 floral organ development stages</td><td>156/200</td><td>1.53</td><td>6.67e-16</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>3</td><td>PO:0007615</td><td>flower development stages</td><td>157/200</td><td>1.50</td><td>4.40e-15</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007616</td><td>4 anthesis</td><td>139/200</td><td>1.43</td><td>5.26e-10</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0001170</td><td>seed development stages</td><td>122/200</td><td>1.35</td><td>2.56e-06</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007631</td><td>embryo development stages</td><td>121/200</td><td>1.34</td><td>3.87e-06</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>PG</td><td>5</td><td>PO:0001185</td><td>C globular stage</td><td>109/200</td><td>1.33</td><td>4.44e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PG</td><td>3</td><td>PO:0007134</td><td>A vegetative growth</td><td>111/200</td><td>1.31</td><td>6.78e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PG</td><td>5</td><td>PO:0007133</td><td>leaf production</td><td>110/200</td><td>1.31</td><td>8.48e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PG</td><td>4</td><td>PO:0007112</td><td>1 main shoot growth</td><td>110/200</td><td>1.31</td><td>8.57e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PG</td><td>5</td><td>PO:0001078</td><td>E expanded cotyledon stage</td><td>108/200</td><td>1.30</td><td>1.37e-04</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>PG</td><td>4</td><td>PO:0001054</td><td>4 leaf senescence stage</td><td>100/200</td><td>1.30</td><td>3.42e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PG</td><td>3</td><td>PO:0001050</td><td>leaf development stages</td><td>100/200</td><td>1.30</td><td>3.50e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PG</td><td>5</td><td>PO:0004507</td><td>D bilateral stage</td><td>105/200</td><td>1.27</td><td>4.76e-04</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>PG</td><td>5</td><td>PO:0001081</td><td>F mature embryo stage</td><td>99/200</td><td>1.24</td><td>2.09e-03</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>KW</td><td>0</td><td>meristem</td><td>-</td><td>18/200</td><td>7.86</td><td>2.29e-12</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT2G46990&keyword=meristem">5.93E-18</a></td><td>yes</td></tr><tr bgcolor=#FF69B4><td>KW</td><td>0</td><td>petal</td><td>-</td><td>44/200</td><td>3.02</td><td>8.32e-12</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>KW</td><td>0</td><td>expansion</td><td>-</td><td>44/200</td><td>2.99</td><td>1.07e-11</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>KW</td><td>0</td><td>differentiation</td><td>-</td><td>44/200</td><td>2.91</td><td>2.73e-11</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT2G46990&keyword=differentiation">1.43E-12</a></td><td>yes</td></tr><tr bgcolor=#FF69B4><td>KW</td><td>0</td><td>inflorescence</td><td>-</td><td>12/200</td><td>10.45</td><td>1.70e-10</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>stage</td><td>-</td><td>47/200</td><td>2.43</td><td>2.50e-09</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>transcription</td><td>-</td><td>35/200</td><td>2.41</td><td>3.76e-07</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT2G46990&keyword=transcription">0</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>activator</td><td>-</td><td>10/200</td><td>5.98</td><td>1.10e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>ipr009057</td><td>-</td><td>11/200</td><td>4.78</td><td>4.03e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>anthesis</td><td>-</td><td>30/200</td><td>2.28</td><td>7.45e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>regulation</td><td>-</td><td>30/200</td><td>2.27</td><td>8.38e-06</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT2G46990&keyword=regulation">1.97E-15</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>homeodomain</td><td>-</td><td>11/200</td><td>4.37</td><td>9.96e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>factor</td><td>-</td><td>35/200</td><td>2.00</td><td>2.57e-05</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT2G46990&keyword=factor">0</a></td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>glycosyl</td><td>-</td><td>14/200</td><td>3.28</td><td>2.85e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>phosphate</td><td>-</td><td>11/200</td><td>3.63</td><td>6.03e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>encodes</td><td>-</td><td>44/200</td><td>1.72</td><td>9.54e-05</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>expression</td><td>-</td><td>14/200</td><td>2.90</td><td>1.16e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>major</td><td>-</td><td>10/200</td><td>3.50</td><td>1.56e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>conserved</td><td>-</td><td>27/200</td><td>1.99</td><td>2.08e-04</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT2G46990&keyword=conserved">3.05E-16</a></td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>biosynthetic</td><td>-</td><td>17/200</td><td>2.38</td><td>3.24e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>bilateral</td><td>-</td><td>11/200</td><td>3.01</td><td>3.36e-04</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>function</td><td>-</td><td>29/200</td><td>1.86</td><td>4.16e-04</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT2G46990&keyword=function">2.46E-15</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>related</td><td>-</td><td>44/200</td><td>1.57</td><td>8.06e-04</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT2G46990&keyword=related">2.57E-15</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>member</td><td>-</td><td>21/200</td><td>1.92</td><td>1.51e-03</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT2G46990&keyword=member">1.43E-12</a></td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>expanded</td><td>-</td><td>11/200</td><td>2.52</td><td>1.58e-03</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>finger</td><td>-</td><td>18/200</td><td>1.95</td><td>2.46e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>transferase</td><td>-</td><td>13/200</td><td>2.12</td><td>3.66e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>flower</td><td>-</td><td>15/200</td><td>1.96</td><td>4.44e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>cotyledon</td><td>-</td><td>11/200</td><td>2.09</td><td>6.98e-03</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT2G46990&keyword=cotyledon">4.99E-18</a></td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>dependent</td><td>-</td><td>22/200</td><td>1.64</td><td>8.03e-03</td><td>-</td><td>no</td></tr></table><table><tr><td valign=top>(*1)</td><td>[B]:Biological process(Gene ontology), [C]:Cellular component(Gene ontology), [M]:Molecular function(Gene ontology), [PS]:Plant Structure(Plant ontology), [PG]:Growth and developmental stages(Plant ontology), [KW]:words found in gene description.</td></tr><tr><td valign=top>(*2)</td><td>([# of genes with the term] / [# of sampling (200)]) / ([# of genes with the term among whole genes] / [# of whole genes]) </td></tr><tr><td valign=top>(*3)</td><td>P-values were calculated on hypergeometric distribution in which we found <i>n</i> genes with a annotation term during 200 highly correlated genes, while we had <i>N</i> genes with the term in the whole genes.</td></tr><tr><td valign=top>(*4)</td><td><a href="http://omicspace.riken.jp/PosMed-plus/">PosMed</a> is a system which serve a p-values showing a relationship between the gene and the annotation term based on literature information and Gene-Gene interaction suchas co-expression or protein-protein interactions.</td></tr></table><hr><a href="/db/SciNetS_ria227i/cria227s904i">Top Page</a></body></html>
0.60078900000000001747
without_OMAT_gene