<html><body><title>AT3G04770.1</title>(↑ Click "Links", if this line appears at the beginning.)<br><H1>Other supporting information</H1><table><tr><td colspan="2" align="left"><b>Gene Model</b><br></td></tr><tr><td NOWRAP width="75"></td><td NOWRAP><img src="/dbfiles/SciNetS_ria227i/cria227s2i/cria227s2ria227u320477001000i/AT3G04770.1.gene_models.png" width="717"><br></td></tr><tr><td colspan=2 align="left"><b>Correlation Plot</b><br></td></tr><tr><td NOWRAP colspan="2" align="left"><img src="/dbfiles/SciNetS_ria227i/cria227s2i/cria227s2ria227u320477001000i/AT3G04770.1.CorrPlot.jpg" width="800"><br><br></td></tr></table><hr><b>Expression profile (Values are plotted in Log(2) values.)</b><br><img src="/dbfiles/SciNetS_ria227i/cria227s2i/cria227s2ria227u320477001000i/AT3G04770.1.F0.Expression.png"><br><hr><b>Genes with related expresssion profiles.</b><br><table border=1><tr><th colspan=7 align="left">Positively Correlated Genes</th></tr><tr><th>Gens</th><th>PCC</th><th>Definition</th><th>Overlap gene</th><th>Definition</th><th>Overlap gene(antisense)</th><th>Definition</th></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u190000093000i">AtsnoR53Y</a></td><td>0.989041</td><td>AtsnoR53Y</td><td>OMAT1P114020</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u423081001000i">AT4G30810.1</a></td><td>0.988784</td><td>scpl29 (serine carboxypeptidase-like 29)</td><td>OMAT4P010140</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u224036001000i">AT2G40360.1</a></td><td>0.988603</td><td>transducin family protein / WD-40 repeat family protein</td><td>OMAT2P110010</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u520226001000i">AT5G02260.1</a></td><td>0.988131</td><td>ATEXPA9 (ARABIDOPSIS THALIANA EXPANSIN A9)</td><td>OMAT5P000540</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u122310001000i">AT1G23100.1</a></td><td>0.987715</td><td>10 kDa chaperonin, putative</td><td>OMAT1P008500</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u321572001000i">AT3G15720.1</a></td><td>0.98713</td><td>glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein</td><td>OMAT3P105290</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u222784001000i">AT2G27840.1</a></td><td>0.985118</td><td>HDT4</td><td>OMAT2P006190</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u224451001000i">AT2G44510.1</a></td><td>0.984033</td><td>p21Cip1-binding protein-related</td><td>OMAT2P012390</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u126422001000i">AT1G64220.1</a></td><td>0.983792</td><td>TOM7-2 (TRANSLOCASE OF OUTER MEMBRANE 7 KDA SUBUNIT 2)</td><td>OMAT1P115800</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u122839502000i">AT1G28395.2</a></td><td>0.983147</td><td>unknown protein</td><td>OMAT1P108980</td><td>-</td><td>-</td><td>-</td></tr><tr><th colspan=7 align="left">Negatively Correlated Genes</th></tr><tr><th>Gens</th><th>PCC</th><th>Definition</th><th>Overlap gene</th><th>Definition</th><th>Overlap gene(antisense)</th><th>Definition</th></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u125140201000i">AT1G51402.1</a></td><td>-0.698472</td><td>unknown protein</td><td>OMAT1P014180</td><td>-</td><td>OMAT1P112450</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u421717001000i">AT4G17170.1</a></td><td>-0.663695</td><td>RABB1C (ARABIDOPSIS RAB GTPASE HOMOLOG B1C)</td><td>OMAT4P104230</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u122062001000i">AT1G20620.1</a></td><td>-0.662483</td><td>CAT3 (CATALASE 3)</td><td>OMAT1P007530,OMAT1P007540</td><td>[OMAT1P007530]-, [OMAT1P007540]-</td><td>OMAT1P106670</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u320315001000i">AT3G03150.1</a></td><td>-0.634716</td><td>unknown protein</td><td>OMAT3P100900,OMAT3P100910</td><td>[OMAT3P100900]-, [OMAT3P100910]-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u223689501000i">AT2G36895.1</a></td><td>-0.627986</td><td>unknown protein</td><td>OMAT2P108545</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u521184001000i">AT5G11840.1</a></td><td>-0.622222</td><td>unknown protein</td><td>OMAT5P103280</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u524601001000i">AT5G46010.1</a></td><td>-0.618756</td><td>homeobox-leucine zipper transcription factor family protein</td><td>-</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u123700701000i">AT1G37007.1</a></td><td>-0.614561</td><td>unknown protein</td><td>-</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u320120201000i">AT3G01202.1</a></td><td>-0.613269</td><td>other RNA</td><td>-</td><td>-</td><td>OMAT3P100100</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u324946001000i">AT3G49460.1</a></td><td>-0.612648</td><td>60S acidic ribosomal protein-related</td><td>-</td><td>-</td><td>-</td><td>-</td></tr></table><br><a href="/dbfiles/SciNetS_ria227i/cria227s2i/cria227s2ria227u320477001000i/AT3G04770.1-correlation.txt">Get whole results</a><br><br> <HR><b>Over-Representation Analysis Result</b><br><br><table border="1"><tr bgcolor=#FF69B4><td></td><td><i>p</i>-value</td><td> <= 1.94e-18</td><td>:20 terms with high significance</td></a></tr><tr bgcolor=#FFFACD><td>1.94e-18 < </td><td><i>p</i>-value</td><td> <= 8.76e-06</td><td> :With considering multiple testing correction;<br><i>p</i> <= 1.00e-02 / 1142</td></tr><tr bgcolor=#FFFFFF><td>8.76e-06 < </td><td><i>p</i>-value</td><td> <= 1.00e-02</td><td></td></tr></table><br><table border="1"><tr><th>Type of term (*1)</th><th>Depth of the term in ontology tree</th><th>ID/Term</th><th>Description</th><th>Number of genes</th><th>Over-Representative rate (*2)</th><th><i>p</i>-value (*3)</th><th>PosMed <i>p</i>-value (*4)<br> (Link to PosMed)</th><th>Found on gene annotation</th></tr><tr bgcolor=#FF69B4><td>B</td><td>4</td><td>GO:0042254</td><td>ribosome biogenesis</td><td>29/200</td><td>22.64</td><td>3.07e-32</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>B</td><td>3</td><td>GO:0022613</td><td>ribonucleoprotein complex biogenesis</td><td>29/200</td><td>21.92</td><td>8.41e-32</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0006412</td><td>translation</td><td>38/200</td><td>5.24</td><td>6.74e-18</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0010467</td><td>gene expression</td><td>59/200</td><td>2.90</td><td>6.32e-15</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0006364</td><td>rRNA processing</td><td>12/200</td><td>19.19</td><td>6.88e-14</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0043170</td><td>macromolecule metabolic process</td><td>80/200</td><td>2.07</td><td>4.01e-12</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0006396</td><td>RNA processing</td><td>17/200</td><td>7.68</td><td>1.22e-11</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0009451</td><td>RNA modification</td><td>11/200</td><td>14.52</td><td>1.72e-11</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0044238</td><td>primary metabolic process</td><td>89/200</td><td>1.80</td><td>3.55e-10</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0044260</td><td>cellular macromolecule metabolic process</td><td>71/200</td><td>2.01</td><td>4.01e-10</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0019538</td><td>protein metabolic process</td><td>54/200</td><td>2.34</td><td>5.01e-10</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0034645</td><td>cellular macromolecule biosynthetic process</td><td>48/200</td><td>2.23</td><td>2.79e-08</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0009059</td><td>macromolecule biosynthetic process</td><td>48/200</td><td>2.22</td><td>3.08e-08</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0044267</td><td>cellular protein metabolic process</td><td>45/200</td><td>2.21</td><td>1.03e-07</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0044249</td><td>cellular biosynthetic process</td><td>52/200</td><td>1.85</td><td>2.65e-06</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0044237</td><td>cellular metabolic process</td><td>75/200</td><td>1.59</td><td>3.64e-06</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0009058</td><td>biosynthetic process</td><td>52/200</td><td>1.79</td><td>7.31e-06</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0016070</td><td>RNA metabolic process</td><td>22/200</td><td>2.59</td><td>1.56e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0006139</td><td>nucleobase, nucleoside, nucleotide and nucleic acid metabolic process</td><td>30/200</td><td>1.78</td><td>7.17e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0090304</td><td>nucleic acid metabolic process</td><td>27/200</td><td>1.80</td><td>1.07e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0006508</td><td>proteolysis</td><td>10/200</td><td>2.39</td><td>3.49e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0034641</td><td>cellular nitrogen compound metabolic process</td><td>30/200</td><td>1.54</td><td>6.35e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0006807</td><td>nitrogen compound metabolic process</td><td>30/200</td><td>1.51</td><td>8.35e-03</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>C</td><td>3</td><td>GO:0030529</td><td>ribonucleoprotein complex</td><td>48/200</td><td>13.76</td><td>1.22e-41</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>4</td><td>GO:0005840</td><td>ribosome</td><td>38/200</td><td>14.83</td><td>2.15e-34</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT3G04770&keyword=ribosome">0</a></td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>3</td><td>GO:0043228</td><td>non-membrane-bounded organelle</td><td>51/200</td><td>8.56</td><td>7.19e-34</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>4</td><td>GO:0043232</td><td>intracellular non-membrane-bounded organelle</td><td>51/200</td><td>8.56</td><td>7.19e-34</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>4</td><td>GO:0033279</td><td>ribosomal subunit</td><td>27/200</td><td>16.63</td><td>2.49e-26</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>5</td><td>GO:0015934</td><td>large ribosomal subunit</td><td>20/200</td><td>21.74</td><td>1.39e-22</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>C</td><td>5</td><td>GO:0022626</td><td>cytosolic ribosome</td><td>24/200</td><td>13.04</td><td>4.98e-21</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>3</td><td>GO:0044446</td><td>intracellular organelle part</td><td>56/200</td><td>3.91</td><td>5.72e-20</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>3</td><td>GO:0044422</td><td>organelle part</td><td>56/200</td><td>3.90</td><td>5.95e-20</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>3</td><td>GO:0044424</td><td>intracellular part</td><td>108/200</td><td>2.12</td><td>1.94e-18</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0005622</td><td>intracellular</td><td>110/200</td><td>2.07</td><td>4.92e-18</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>5</td><td>GO:0044445</td><td>cytosolic part</td><td>19/200</td><td>12.69</td><td>6.94e-17</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0043229</td><td>intracellular organelle</td><td>96/200</td><td>2.08</td><td>3.13e-15</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>4</td><td>GO:0005737</td><td>cytoplasm</td><td>82/200</td><td>2.19</td><td>7.10e-14</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>4</td><td>GO:0044444</td><td>cytoplasmic part</td><td>77/200</td><td>2.22</td><td>3.29e-13</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>4</td><td>GO:0070013</td><td>intracellular organelle lumen</td><td>19/200</td><td>7.00</td><td>5.01e-12</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0043233</td><td>organelle lumen</td><td>19/200</td><td>6.99</td><td>5.21e-12</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0044464</td><td>cell part</td><td>138/200</td><td>1.51</td><td>8.64e-12</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>5</td><td>GO:0005730</td><td>nucleolus</td><td>15/200</td><td>8.75</td><td>2.29e-11</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>5</td><td>GO:0005829</td><td>cytosol</td><td>20/200</td><td>4.83</td><td>1.38e-09</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>4</td><td>GO:0044429</td><td>mitochondrial part</td><td>12/200</td><td>8.60</td><td>1.85e-09</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>5</td><td>GO:0031981</td><td>nuclear lumen</td><td>15/200</td><td>6.20</td><td>3.46e-09</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>5</td><td>GO:0005739</td><td>mitochondrion</td><td>23/200</td><td>3.59</td><td>3.12e-08</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>4</td><td>GO:0044428</td><td>nuclear part</td><td>15/200</td><td>4.51</td><td>2.80e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>4</td><td>GO:0043231</td><td>intracellular membrane-bounded organelle</td><td>69/200</td><td>1.57</td><td>1.61e-05</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>3</td><td>GO:0043227</td><td>membrane-bounded organelle</td><td>69/200</td><td>1.57</td><td>1.62e-05</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>4</td><td>GO:0031967</td><td>organelle envelope</td><td>11/200</td><td>2.64</td><td>1.07e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>3</td><td>GO:0031975</td><td>envelope</td><td>11/200</td><td>2.64</td><td>1.07e-03</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>M</td><td>3</td><td>GO:0003735</td><td>structural constituent of ribosome</td><td>35/200</td><td>16.17</td><td>3.90e-33</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT3G04770&keyword=structural%20constituent%20ribosome">0</a></td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>3</td><td>GO:0016787</td><td>hydrolase activity</td><td>27/200</td><td>1.73</td><td>1.90e-03</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0000037</td><td>shoot apex</td><td>141/200</td><td>1.64</td><td>9.69e-16</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009052</td><td>pedicel</td><td>133/200</td><td>1.64</td><td>4.23e-14</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0020038</td><td>petiole</td><td>127/200</td><td>1.67</td><td>8.94e-14</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009005</td><td>root</td><td>139/200</td><td>1.54</td><td>6.82e-13</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009009</td><td>embryo</td><td>142/200</td><td>1.47</td><td>2.13e-11</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009025</td><td>leaf</td><td>137/200</td><td>1.49</td><td>3.63e-11</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009010</td><td>seed</td><td>142/200</td><td>1.45</td><td>6.59e-11</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009032</td><td>petal</td><td>132/200</td><td>1.51</td><td>7.71e-11</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009001</td><td>fruit</td><td>142/200</td><td>1.44</td><td>1.05e-10</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0006342</td><td>infructescence</td><td>142/200</td><td>1.44</td><td>1.05e-10</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009031</td><td>sepal</td><td>136/200</td><td>1.47</td><td>1.40e-10</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009028</td><td>microsporophyll</td><td>127/200</td><td>1.51</td><td>2.39e-10</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0008034</td><td>leaf whorl</td><td>137/200</td><td>1.45</td><td>3.14e-10</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0008033</td><td>phyllome whorl</td><td>137/200</td><td>1.45</td><td>3.14e-10</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009049</td><td>inflorescence</td><td>146/200</td><td>1.39</td><td>6.32e-10</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009046</td><td>flower</td><td>145/200</td><td>1.39</td><td>9.40e-10</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0020039</td><td>leaf lamina</td><td>124/200</td><td>1.50</td><td>9.67e-10</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0006001</td><td>phyllome</td><td>143/200</td><td>1.39</td><td>1.66e-09</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0008037</td><td>seedling</td><td>129/200</td><td>1.46</td><td>2.08e-09</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009006</td><td>shoot</td><td>148/200</td><td>1.36</td><td>2.72e-09</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009026</td><td>sporophyll</td><td>130/200</td><td>1.44</td><td>3.88e-09</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0000013</td><td>cauline leaf</td><td>116/200</td><td>1.50</td><td>9.38e-09</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009027</td><td>megasporophyll</td><td>122/200</td><td>1.45</td><td>1.97e-08</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009047</td><td>stem</td><td>121/200</td><td>1.43</td><td>6.04e-08</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>4</td><td>PO:0000230</td><td>inflorescence meristem</td><td>107/200</td><td>1.38</td><td>9.50e-06</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>3</td><td>PO:0009013</td><td>meristem</td><td>109/200</td><td>1.36</td><td>1.53e-05</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>4</td><td>PO:0020030</td><td>cotyledon</td><td>101/200</td><td>1.38</td><td>2.47e-05</td><td>-</td><td>yes</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0001081</td><td>F mature embryo stage</td><td>135/200</td><td>1.70</td><td>5.67e-16</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0004507</td><td>D bilateral stage</td><td>136/200</td><td>1.65</td><td>4.83e-15</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0001078</td><td>E expanded cotyledon stage</td><td>136/200</td><td>1.64</td><td>9.90e-15</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0007134</td><td>A vegetative growth</td><td>135/200</td><td>1.59</td><td>1.96e-13</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007631</td><td>embryo development stages</td><td>138/200</td><td>1.53</td><td>2.08e-12</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0001170</td><td>seed development stages</td><td>138/200</td><td>1.53</td><td>3.08e-12</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0001185</td><td>C globular stage</td><td>129/200</td><td>1.57</td><td>6.17e-12</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0007133</td><td>leaf production</td><td>131/200</td><td>1.56</td><td>6.70e-12</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007112</td><td>1 main shoot growth</td><td>131/200</td><td>1.56</td><td>6.82e-12</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0007604</td><td>corolla developmental stages</td><td>140/200</td><td>1.42</td><td>9.65e-10</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0001054</td><td>4 leaf senescence stage</td><td>118/200</td><td>1.53</td><td>1.27e-09</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0001050</td><td>leaf development stages</td><td>118/200</td><td>1.53</td><td>1.32e-09</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007616</td><td>4 anthesis</td><td>137/200</td><td>1.41</td><td>3.18e-09</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007600</td><td>3 floral organ development stages</td><td>140/200</td><td>1.37</td><td>1.34e-08</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0007615</td><td>flower development stages</td><td>142/200</td><td>1.36</td><td>2.39e-08</td><td>-</td><td>yes</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>KW</td><td>0</td><td>ribosome</td><td>-</td><td>41/200</td><td>15.53</td><td>7.43e-38</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT3G04770&keyword=ribosome">0</a></td><td>yes</td></tr><tr bgcolor=#FF69B4><td>KW</td><td>0</td><td>ribosomal</td><td>-</td><td>41/200</td><td>13.58</td><td>2.00e-35</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT3G04770&keyword=ribosomal">0</a></td><td>yes</td></tr><tr bgcolor=#FF69B4><td>KW</td><td>0</td><td>constituent</td><td>-</td><td>36/200</td><td>12.85</td><td>2.25e-30</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT3G04770&keyword=constituent">0</a></td><td>yes</td></tr><tr bgcolor=#FF69B4><td>KW</td><td>0</td><td>structural</td><td>-</td><td>36/200</td><td>10.27</td><td>6.84e-27</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT3G04770&keyword=structural">0</a></td><td>yes</td></tr><tr bgcolor=#FF69B4><td>KW</td><td>0</td><td>translation</td><td>-</td><td>39/200</td><td>7.87</td><td>1.11e-24</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>KW</td><td>0</td><td>cytosolic</td><td>-</td><td>24/200</td><td>11.21</td><td>1.96e-19</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>KW</td><td>0</td><td>subunit</td><td>-</td><td>39/200</td><td>5.32</td><td>1.43e-18</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>large</td><td>-</td><td>19/200</td><td>12.39</td><td>1.10e-16</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>biogenesis</td><td>-</td><td>18/200</td><td>13.24</td><td>1.82e-16</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>mitochondrial</td><td>-</td><td>17/200</td><td>7.54</td><td>1.67e-11</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>nucleolus</td><td>-</td><td>13/200</td><td>9.56</td><td>1.16e-10</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>intracellular</td><td>-</td><td>20/200</td><td>3.88</td><td>6.22e-08</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>nucleotide</td><td>-</td><td>17/200</td><td>2.67</td><td>7.83e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>mitochondrion</td><td>-</td><td>15/200</td><td>2.73</td><td>1.39e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>small</td><td>-</td><td>11/200</td><td>2.73</td><td>8.00e-04</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>conserved</td><td>-</td><td>24/200</td><td>1.77</td><td>2.27e-03</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>peptidase</td><td>-</td><td>10/200</td><td>2.51</td><td>2.36e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>terminal</td><td>-</td><td>30/200</td><td>1.56</td><td>5.56e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>nucleic</td><td>-</td><td>13/200</td><td>1.99</td><td>6.32e-03</td><td>-</td><td>no</td></tr></table><table><tr><td valign=top>(*1)</td><td>[B]:Biological process(Gene ontology), [C]:Cellular component(Gene ontology), [M]:Molecular function(Gene ontology), [PS]:Plant Structure(Plant ontology), [PG]:Growth and developmental stages(Plant ontology), [KW]:words found in gene description.</td></tr><tr><td valign=top>(*2)</td><td>([# of genes with the term] / [# of sampling (200)]) / ([# of genes with the term among whole genes] / [# of whole genes]) </td></tr><tr><td valign=top>(*3)</td><td>P-values were calculated on hypergeometric distribution in which we found <i>n</i> genes with a annotation term during 200 highly correlated genes, while we had <i>N</i> genes with the term in the whole genes.</td></tr><tr><td valign=top>(*4)</td><td><a href="http://omicspace.riken.jp/PosMed-plus/">PosMed</a> is a system which serve a p-values showing a relationship between the gene and the annotation term based on literature information and Gene-Gene interaction suchas co-expression or protein-protein interactions.</td></tr></table><hr><a href="/db/SciNetS_ria227i/cria227s904i">Top Page</a></body></html>
with_OMAT_gene
AT3G04770.1
0.68264599999999997504