with_OMAT_gene
AT3G13380.1
<html><body><title>AT3G13380.1</title>(↑ Click "Links", if this line appears at the beginning.)<br><H1>Other supporting information</H1><table><tr><td colspan="2" align="left"><b>Gene Model</b><br></td></tr><tr><td NOWRAP width="75"></td><td NOWRAP><img src="/dbfiles/SciNetS_ria227i/cria227s2i/cria227s2ria227u321338001000i/AT3G13380.1.gene_models.png" width="717"><br></td></tr><tr><td colspan=2 align="left"><b>Correlation Plot</b><br></td></tr><tr><td NOWRAP colspan="2" align="left"><img src="/dbfiles/SciNetS_ria227i/cria227s2i/cria227s2ria227u321338001000i/AT3G13380.1.CorrPlot.jpg" width="800"><br><br></td></tr></table><hr><b>Expression profile (Values are plotted in Log(2) values.)</b><br><img src="/dbfiles/SciNetS_ria227i/cria227s2i/cria227s2ria227u321338001000i/AT3G13380.1.F0.Expression.png"><br><hr><b>Genes with related expresssion profiles.</b><br><table border=1><tr><th colspan=7 align="left">Positively Correlated Genes</th></tr><tr><th>Gens</th><th>PCC</th><th>Definition</th><th>Overlap gene</th><th>Definition</th><th>Overlap gene(antisense)</th><th>Definition</th></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u127714001000i">AT1G77140.1</a></td><td>0.86786</td><td>VPS45 (VACUOLAR PROTEIN SORTING 45)</td><td>-</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u220320001000i">AT2G03200.1</a></td><td>0.860125</td><td>aspartyl protease family protein</td><td>OMAT2P100640</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u123380001000i">AT1G33800.1</a></td><td>0.852939</td><td>unknown protein</td><td>OMAT1P011780</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u321427001000i">AT3G14270.1</a></td><td>0.841356</td><td>phosphatidylinositol-4-phosphate 5-kinase family protein</td><td>OMAT3P005080</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u127299001000i">AT1G72990.1</a></td><td>0.841354</td><td>BGAL17 (beta-galactosidase 17)</td><td>OMAT1P118550</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u420271001000i">AT4G02710.1</a></td><td>0.836744</td><td>kinase interacting family protein</td><td>OMAT4P100950</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u524856001000i">AT5G48560.1</a></td><td>0.834088</td><td>basic helix-loop-helix (bHLH) family protein</td><td>OMAT5P013840,OMAT5P013850</td><td>[OMAT5P013840]-, [OMAT5P013850]-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u526072001000i">AT5G60720.1</a></td><td>0.833081</td><td>unknown protein</td><td>OMAT5P116295</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u321565001000i">AT3G15650.1</a></td><td>0.831687</td><td>phospholipase/carboxylesterase family protein</td><td>-</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u521455001000i">AT5G14550.1</a></td><td>0.829862</td><td>unknown protein</td><td>OMAT5P104150</td><td>-</td><td>OMAT5P004950,OMAT5P004960</td><td>[OMAT5P004950]-, [OMAT5P004960]-</td></tr><tr><th colspan=7 align="left">Negatively Correlated Genes</th></tr><tr><th>Gens</th><th>PCC</th><th>Definition</th><th>Overlap gene</th><th>Definition</th><th>Overlap gene(antisense)</th><th>Definition</th></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u526097001000i">AT5G60970.1</a></td><td>-0.780645</td><td>TCP5 (TEOSINTE BRANCHED1, CYCLOIDEA AND PCF TRANSCRIPTION FACTOR 5)</td><td>OMAT5P116390</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u126526001000i">AT1G65260.1</a></td><td>-0.778993</td><td>PTAC4 (PLASTID TRANSCRIPTIONALLY ACTIVE4)</td><td>OMAT1P018060</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u322792001000i">AT3G27920.1</a></td><td>-0.765464</td><td>ATMYB0 (MYB DOMAIN PROTEIN 0)</td><td>-</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u223564001000i">AT2G35640.1</a></td><td>-0.748683</td><td>hydroxyproline-rich glycoprotein family protein</td><td>-</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u420018001000i">AT4G00180.1</a></td><td>-0.740141</td><td>YAB3 (YABBY3)</td><td>OMAT4P100060,OMAT4P100070</td><td>[OMAT4P100060]-, [OMAT4P100070]-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u521347501000i">AT5G13475.1</a></td><td>-0.717925</td><td>transposable element gene</td><td>-</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u321585001000i">AT3G15850.1</a></td><td>-0.713137</td><td>FAD5 (FATTY ACID DESATURASE 5)</td><td>OMAT3P005850</td><td>-</td><td>OMAT3P105330</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u127863001000i">AT1G78630.1</a></td><td>-0.704337</td><td>emb1473 (embryo defective 1473)</td><td>OMAT1P023410</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u526309002000i">AT5G63090.2</a></td><td>-0.703382</td><td>LOB (LATERAL ORGAN BOUNDARIES)</td><td>-</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u223042001000i">AT2G30420.1</a></td><td>-0.701024</td><td>ETC2</td><td>-</td><td>-</td><td>-</td><td>-</td></tr></table><br><a href="/dbfiles/SciNetS_ria227i/cria227s2i/cria227s2ria227u321338001000i/AT3G13380.1-correlation.txt">Get whole results</a><br><br> <HR><b>Over-Representation Analysis Result</b><br><br><table border="1"><tr bgcolor=#FF69B4><td></td><td><i>p</i>-value</td><td> <= 6.62e-20</td><td>:20 terms with high significance</td></a></tr><tr bgcolor=#FFFACD><td>6.62e-20 < </td><td><i>p</i>-value</td><td> <= 8.76e-06</td><td> :With considering multiple testing correction;<br><i>p</i> <= 1.00e-02 / 1142</td></tr><tr bgcolor=#FFFFFF><td>8.76e-06 < </td><td><i>p</i>-value</td><td> <= 1.00e-02</td><td></td></tr></table><br><table border="1"><tr><th>Type of term (*1)</th><th>Depth of the term in ontology tree</th><th>ID/Term</th><th>Description</th><th>Number of genes</th><th>Over-Representative rate (*2)</th><th><i>p</i>-value (*3)</th><th>PosMed <i>p</i>-value (*4)<br> (Link to PosMed)</th><th>Found on gene annotation</th></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0071669</td><td>plant-type cell wall organization or biogenesis</td><td>10/200</td><td>13.30</td><td>2.88e-10</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0044264</td><td>cellular polysaccharide metabolic process</td><td>10/200</td><td>11.71</td><td>1.13e-09</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0005976</td><td>polysaccharide metabolic process</td><td>10/200</td><td>10.66</td><td>3.07e-09</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0006725</td><td>cellular aromatic compound metabolic process</td><td>13/200</td><td>6.02</td><td>4.38e-08</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0044237</td><td>cellular metabolic process</td><td>80/200</td><td>1.69</td><td>8.08e-08</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0006519</td><td>cellular amino acid and derivative metabolic process</td><td>16/200</td><td>4.60</td><td>9.30e-08</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0016051</td><td>carbohydrate biosynthetic process</td><td>11/200</td><td>6.58</td><td>1.39e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0044281</td><td>small molecule metabolic process</td><td>26/200</td><td>2.89</td><td>3.58e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0034641</td><td>cellular nitrogen compound metabolic process</td><td>41/200</td><td>2.11</td><td>1.35e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0009058</td><td>biosynthetic process</td><td>54/200</td><td>1.85</td><td>1.46e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0006807</td><td>nitrogen compound metabolic process</td><td>41/200</td><td>2.07</td><td>2.24e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0044249</td><td>cellular biosynthetic process</td><td>52/200</td><td>1.85</td><td>2.65e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0044262</td><td>cellular carbohydrate metabolic process</td><td>13/200</td><td>4.21</td><td>3.20e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0044283</td><td>small molecule biosynthetic process</td><td>16/200</td><td>3.52</td><td>3.65e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0044238</td><td>primary metabolic process</td><td>77/200</td><td>1.55</td><td>5.93e-06</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0005975</td><td>carbohydrate metabolic process</td><td>16/200</td><td>3.07</td><td>2.15e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0006139</td><td>nucleobase, nucleoside, nucleotide and nucleic acid metabolic process</td><td>34/200</td><td>2.01</td><td>2.84e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0019222</td><td>regulation of metabolic process</td><td>26/200</td><td>2.21</td><td>5.03e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0044271</td><td>cellular nitrogen compound biosynthetic process</td><td>10/200</td><td>3.78</td><td>7.97e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0031323</td><td>regulation of cellular metabolic process</td><td>24/200</td><td>2.22</td><td>8.58e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0080090</td><td>regulation of primary metabolic process</td><td>23/200</td><td>2.18</td><td>1.49e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0010468</td><td>regulation of gene expression</td><td>23/200</td><td>2.16</td><td>1.78e-04</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT3G13380&keyword=regulation%20gene%20expression">1.01E-15</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0009889</td><td>regulation of biosynthetic process</td><td>22/200</td><td>2.19</td><td>1.92e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0031326</td><td>regulation of cellular biosynthetic process</td><td>22/200</td><td>2.19</td><td>1.92e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0060255</td><td>regulation of macromolecule metabolic process</td><td>23/200</td><td>2.10</td><td>2.64e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0010556</td><td>regulation of macromolecule biosynthetic process</td><td>21/200</td><td>2.13</td><td>3.76e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0019219</td><td>regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process</td><td>21/200</td><td>2.09</td><td>4.76e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0043436</td><td>oxoacid metabolic process</td><td>12/200</td><td>2.73</td><td>5.27e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0006082</td><td>organic acid metabolic process</td><td>12/200</td><td>2.72</td><td>5.41e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0051171</td><td>regulation of nitrogen compound metabolic process</td><td>21/200</td><td>2.07</td><td>5.45e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0042180</td><td>cellular ketone metabolic process</td><td>12/200</td><td>2.67</td><td>6.29e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0034645</td><td>cellular macromolecule biosynthetic process</td><td>36/200</td><td>1.67</td><td>7.60e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0009059</td><td>macromolecule biosynthetic process</td><td>36/200</td><td>1.66</td><td>8.04e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0050789</td><td>regulation of biological process</td><td>30/200</td><td>1.73</td><td>1.08e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0050794</td><td>regulation of cellular process</td><td>27/200</td><td>1.77</td><td>1.35e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0006350</td><td>transcription</td><td>20/200</td><td>1.96</td><td>1.44e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0048856</td><td>anatomical structure development</td><td>18/200</td><td>2.01</td><td>1.70e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0048513</td><td>organ development</td><td>11/200</td><td>2.49</td><td>1.77e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0048731</td><td>system development</td><td>11/200</td><td>2.48</td><td>1.79e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0007275</td><td>multicellular organismal development</td><td>20/200</td><td>1.88</td><td>2.32e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0022414</td><td>reproductive process</td><td>13/200</td><td>2.16</td><td>3.12e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0003006</td><td>reproductive developmental process</td><td>12/200</td><td>2.18</td><td>3.82e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0090304</td><td>nucleic acid metabolic process</td><td>25/200</td><td>1.66</td><td>4.44e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0042221</td><td>response to chemical stimulus</td><td>20/200</td><td>1.75</td><td>5.25e-03</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0044464</td><td>cell part</td><td>129/200</td><td>1.41</td><td>3.03e-08</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>3</td><td>GO:0016020</td><td>membrane</td><td>47/200</td><td>1.72</td><td>6.00e-05</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT3G13380&keyword=membrane">3.64E-21</a></td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>4</td><td>GO:0005886</td><td>plasma membrane</td><td>24/200</td><td>1.94</td><td>6.65e-04</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT3G13380&keyword=plasma%20membrane">3.64E-21</a></td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>4</td><td>GO:0031224</td><td>intrinsic to membrane</td><td>12/200</td><td>2.24</td><td>3.06e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>4</td><td>GO:0043231</td><td>intracellular membrane-bounded organelle</td><td>59/200</td><td>1.34</td><td>4.87e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>3</td><td>GO:0043227</td><td>membrane-bounded organelle</td><td>59/200</td><td>1.34</td><td>4.88e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>3</td><td>GO:0043229</td><td>intracellular organelle</td><td>60/200</td><td>1.30</td><td>9.43e-03</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FFFFFF><td>M</td><td>4</td><td>GO:0016757</td><td>transferase activity, transferring glycosyl groups</td><td>10/200</td><td>3.43</td><td>1.86e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>3</td><td>GO:0003700</td><td>transcription factor activity</td><td>22/200</td><td>2.18</td><td>2.08e-04</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>PS</td><td>3</td><td>PO:0009013</td><td>meristem</td><td>174/200</td><td>2.17</td><td>3.70e-44</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0000230</td><td>inflorescence meristem</td><td>170/200</td><td>2.19</td><td>1.77e-42</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>3</td><td>PO:0009005</td><td>root</td><td>165/200</td><td>1.83</td><td>1.00e-28</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>3</td><td>PO:0009006</td><td>shoot</td><td>178/200</td><td>1.64</td><td>2.81e-27</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0009049</td><td>inflorescence</td><td>175/200</td><td>1.67</td><td>3.37e-27</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>5</td><td>PO:0009046</td><td>flower</td><td>174/200</td><td>1.67</td><td>9.00e-27</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>3</td><td>PO:0006001</td><td>phyllome</td><td>171/200</td><td>1.67</td><td>2.53e-25</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>5</td><td>PO:0008037</td><td>seedling</td><td>157/200</td><td>1.78</td><td>5.15e-24</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0009001</td><td>fruit</td><td>164/200</td><td>1.67</td><td>9.55e-23</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>3</td><td>PO:0006342</td><td>infructescence</td><td>164/200</td><td>1.67</td><td>9.55e-23</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0009009</td><td>embryo</td><td>161/200</td><td>1.67</td><td>1.03e-21</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>3</td><td>PO:0009010</td><td>seed</td><td>162/200</td><td>1.66</td><td>1.10e-21</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT3G13380&keyword=seed">1.90E-13</a></td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>3</td><td>PO:0009032</td><td>petal</td><td>152/200</td><td>1.73</td><td>3.96e-21</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0009047</td><td>stem</td><td>147/200</td><td>1.74</td><td>5.59e-20</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0009025</td><td>leaf</td><td>154/200</td><td>1.67</td><td>6.60e-20</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>5</td><td>PO:0020039</td><td>leaf lamina</td><td>145/200</td><td>1.76</td><td>6.62e-20</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0008034</td><td>leaf whorl</td><td>156/200</td><td>1.65</td><td>7.84e-20</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0008033</td><td>phyllome whorl</td><td>156/200</td><td>1.65</td><td>7.84e-20</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009026</td><td>sporophyll</td><td>152/200</td><td>1.69</td><td>8.84e-20</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009028</td><td>microsporophyll</td><td>146/200</td><td>1.74</td><td>1.13e-19</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009031</td><td>sepal</td><td>152/200</td><td>1.65</td><td>1.74e-18</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009027</td><td>megasporophyll</td><td>142/200</td><td>1.69</td><td>2.37e-17</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0020091</td><td>male gametophyte</td><td>136/200</td><td>1.64</td><td>9.12e-15</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009052</td><td>pedicel</td><td>133/200</td><td>1.64</td><td>4.23e-14</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0000037</td><td>shoot apex</td><td>137/200</td><td>1.59</td><td>9.30e-14</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0000013</td><td>cauline leaf</td><td>128/200</td><td>1.66</td><td>1.07e-13</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0020038</td><td>petiole</td><td>123/200</td><td>1.62</td><td>5.60e-12</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0020030</td><td>cotyledon</td><td>115/200</td><td>1.57</td><td>7.11e-10</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0000034</td><td>vascular system</td><td>17/200</td><td>5.21</td><td>6.18e-09</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0005020</td><td>vascular bundle</td><td>13/200</td><td>6.28</td><td>2.58e-08</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009015</td><td>vascular tissue</td><td>12/200</td><td>6.76</td><td>3.26e-08</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>4</td><td>PO:0005679</td><td>epidermis</td><td>24/200</td><td>1.94</td><td>6.61e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>3</td><td>PO:0009014</td><td>dermal tissue</td><td>24/200</td><td>1.94</td><td>6.65e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>3</td><td>PO:0004013</td><td>epidermal cell</td><td>22/200</td><td>1.84</td><td>1.98e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>3</td><td>PO:0000084</td><td>sperm cell</td><td>46/200</td><td>1.42</td><td>4.79e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>3</td><td>PO:0020097</td><td>generative cell</td><td>46/200</td><td>1.42</td><td>4.79e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>5</td><td>PO:0006035</td><td>shoot epidermis</td><td>19/200</td><td>1.70</td><td>8.84e-03</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>PG</td><td>5</td><td>PO:0007604</td><td>corolla developmental stages</td><td>169/200</td><td>1.71</td><td>3.75e-26</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>3</td><td>PO:0007615</td><td>flower development stages</td><td>172/200</td><td>1.64</td><td>9.12e-25</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>4</td><td>PO:0007600</td><td>3 floral organ development stages</td><td>169/200</td><td>1.66</td><td>3.21e-24</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>4</td><td>PO:0007616</td><td>4 anthesis</td><td>163/200</td><td>1.68</td><td>7.32e-23</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0001185</td><td>C globular stage</td><td>140/200</td><td>1.71</td><td>2.77e-17</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0007133</td><td>leaf production</td><td>142/200</td><td>1.69</td><td>2.89e-17</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007112</td><td>1 main shoot growth</td><td>142/200</td><td>1.69</td><td>2.96e-17</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0007134</td><td>A vegetative growth</td><td>142/200</td><td>1.68</td><td>5.97e-17</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007631</td><td>embryo development stages</td><td>144/200</td><td>1.60</td><td>2.70e-15</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0001170</td><td>seed development stages</td><td>144/200</td><td>1.59</td><td>4.18e-15</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0001054</td><td>4 leaf senescence stage</td><td>130/200</td><td>1.69</td><td>8.07e-15</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0001050</td><td>leaf development stages</td><td>130/200</td><td>1.69</td><td>8.47e-15</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0001078</td><td>E expanded cotyledon stage</td><td>130/200</td><td>1.57</td><td>5.92e-12</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0004507</td><td>D bilateral stage</td><td>129/200</td><td>1.57</td><td>8.50e-12</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0001081</td><td>F mature embryo stage</td><td>125/200</td><td>1.57</td><td>2.54e-11</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>biosynthesis</td><td>-</td><td>13/200</td><td>5.35</td><td>1.86e-07</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT3G13380&keyword=biosynthesis">1.90E-13</a></td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>biosynthetic</td><td>-</td><td>23/200</td><td>3.22</td><td>2.37e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>encodes</td><td>-</td><td>49/200</td><td>1.92</td><td>1.84e-06</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT3G13380&keyword=encodes">1.90E-13</a></td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>meristem</td><td>-</td><td>11/200</td><td>4.80</td><td>3.82e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>process</td><td>-</td><td>41/200</td><td>2.00</td><td>5.02e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>membrane</td><td>-</td><td>48/200</td><td>1.80</td><td>1.35e-05</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT3G13380&keyword=membrane">3.64E-21</a></td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>differentiation</td><td>-</td><td>32/200</td><td>2.12</td><td>1.81e-05</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT3G13380&keyword=differentiation">8.30E-16</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>mutants</td><td>-</td><td>10/200</td><td>4.00</td><td>4.84e-05</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT3G13380&keyword=mutants">3.03E-16</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>petal</td><td>-</td><td>30/200</td><td>2.06</td><td>5.58e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>expansion</td><td>-</td><td>30/200</td><td>2.04</td><td>6.40e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>groups</td><td>-</td><td>11/200</td><td>3.37</td><td>1.21e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>regulation</td><td>-</td><td>27/200</td><td>2.04</td><td>1.40e-04</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT3G13380&keyword=regulation">1.97E-15</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>transferring</td><td>-</td><td>11/200</td><td>3.30</td><td>1.46e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>plasma</td><td>-</td><td>24/200</td><td>2.09</td><td>2.11e-04</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT3G13380&keyword=plasma">3.64E-21</a></td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>integral</td><td>-</td><td>11/200</td><td>3.08</td><td>2.72e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>glycosyl</td><td>-</td><td>12/200</td><td>2.81</td><td>3.91e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>expression</td><td>-</td><td>13/200</td><td>2.69</td><td>3.93e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>function</td><td>-</td><td>29/200</td><td>1.86</td><td>4.16e-04</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT3G13380&keyword=function">7.00E-58</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>transcription</td><td>-</td><td>27/200</td><td>1.86</td><td>6.37e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>nucleus</td><td>-</td><td>24/200</td><td>1.86</td><td>1.18e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>anthesis</td><td>-</td><td>24/200</td><td>1.83</td><td>1.52e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>stage</td><td>-</td><td>31/200</td><td>1.60</td><td>3.21e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>metabolic</td><td>-</td><td>20/200</td><td>1.74</td><td>5.69e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>response</td><td>-</td><td>28/200</td><td>1.56</td><td>6.81e-03</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT3G13380&keyword=response">1.90E-13</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>member</td><td>-</td><td>19/200</td><td>1.73</td><td>7.04e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>dependent</td><td>-</td><td>22/200</td><td>1.64</td><td>8.03e-03</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT3G13380&keyword=dependent">2.00E-65</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>factor</td><td>-</td><td>27/200</td><td>1.54</td><td>9.02e-03</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT3G13380&keyword=factor">2.00E-108</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>transferase</td><td>-</td><td>12/200</td><td>1.96</td><td>9.10e-03</td><td>-</td><td>no</td></tr></table><table><tr><td valign=top>(*1)</td><td>[B]:Biological process(Gene ontology), [C]:Cellular component(Gene ontology), [M]:Molecular function(Gene ontology), [PS]:Plant Structure(Plant ontology), [PG]:Growth and developmental stages(Plant ontology), [KW]:words found in gene description.</td></tr><tr><td valign=top>(*2)</td><td>([# of genes with the term] / [# of sampling (200)]) / ([# of genes with the term among whole genes] / [# of whole genes]) </td></tr><tr><td valign=top>(*3)</td><td>P-values were calculated on hypergeometric distribution in which we found <i>n</i> genes with a annotation term during 200 highly correlated genes, while we had <i>N</i> genes with the term in the whole genes.</td></tr><tr><td valign=top>(*4)</td><td><a href="http://omicspace.riken.jp/PosMed-plus/">PosMed</a> is a system which serve a p-values showing a relationship between the gene and the annotation term based on literature information and Gene-Gene interaction suchas co-expression or protein-protein interactions.</td></tr></table><hr><a href="/db/SciNetS_ria227i/cria227s904i">Top Page</a></body></html>
0.63502800000000003688