with_OMAT_gene
AT5G54540.1
<html><body><title>AT5G54540.1</title>(↑ Click "Links", if this line appears at the beginning.)<br><H1>Other supporting information</H1><table><tr><td colspan="2" align="left"><b>Gene Model</b><br></td></tr><tr><td NOWRAP width="75"></td><td NOWRAP><img src="/dbfiles/SciNetS_ria227i/cria227s2i/cria227s2ria227u525454001000i/AT5G54540.1.gene_models.png" width="717"><br></td></tr><tr><td colspan=2 align="left"><b>Correlation Plot</b><br></td></tr><tr><td NOWRAP colspan="2" align="left"><img src="/dbfiles/SciNetS_ria227i/cria227s2i/cria227s2ria227u525454001000i/AT5G54540.1.CorrPlot.jpg" width="800"><br><br></td></tr></table><hr><b>Expression profile (Values are plotted in Log(2) values.)</b><br><img src="/dbfiles/SciNetS_ria227i/cria227s2i/cria227s2ria227u525454001000i/AT5G54540.1.F0.Expression.png"><br><hr><b>Genes with related expresssion profiles.</b><br><table border=1><tr><th colspan=7 align="left">Positively Correlated Genes</th></tr><tr><th>Gens</th><th>PCC</th><th>Definition</th><th>Overlap gene</th><th>Definition</th><th>Overlap gene(antisense)</th><th>Definition</th></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u123179001000i">AT1G31790.1</a></td><td>0.92785</td><td>pentatricopeptide (PPR) repeat-containing protein</td><td>-</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u124903201000i">AT1G49032.1</a></td><td>0.923074</td><td>unknown protein</td><td>OMAT1P013460</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u524282501000i">AT5G42825.1</a></td><td>0.919147</td><td>unknown protein</td><td>OMAT5P011870</td><td>-</td><td>OMAT5P110230</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u122100001000i">AT1G21000.1</a></td><td>0.918783</td><td>zinc-binding family protein</td><td>OMAT1P007700</td><td>-</td><td>OMAT1P106770</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u420500001000i">AT4G05000.1</a></td><td>0.916118</td><td>VPS28-2</td><td>OMAT4P001670</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u521303001000i">AT5G13030.1</a></td><td>0.912751</td><td>unknown protein</td><td>OMAT5P004320</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u422222001000i">AT4G22220.1</a></td><td>0.912637</td><td>ISU1</td><td>OMAT4P105740</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u420128002000i">AT4G01280.2</a></td><td>0.905266</td><td>myb family transcription factor</td><td>OMAT4P000410</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u321766801000i">AT3G17668.1</a></td><td>0.899479</td><td>ENA (ENHANCER OF ATNSI ACTIVITY)</td><td>OMAT3P006640</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u222606001000i">AT2G26060.1</a></td><td>0.890552</td><td>emb1345 (embryo defective 1345)</td><td>OMAT2P005540</td><td>-</td><td>-</td><td>-</td></tr><tr><th colspan=7 align="left">Negatively Correlated Genes</th></tr><tr><th>Gens</th><th>PCC</th><th>Definition</th><th>Overlap gene</th><th>Definition</th><th>Overlap gene(antisense)</th><th>Definition</th></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u320665001000i">AT3G06650.1</a></td><td>-0.875329</td><td>ACLB-1</td><td>-</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u120161001000i">AT1G01610.1</a></td><td>-0.863168</td><td>GPAT4 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 4)</td><td>OMAT1P100200</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u524946001000i">AT5G49460.1</a></td><td>-0.852466</td><td>ACLB-2 (ATP CITRATE LYASE SUBUNIT B 2)</td><td>OMAT5P014120</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u521639001000i">AT5G16390.1</a></td><td>-0.829177</td><td>CAC1 (CHLOROPLASTIC ACETYLCOENZYME A CARBOXYLASE 1)</td><td>OMAT5P104670</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u120535001000i">AT1G05350.1</a></td><td>-0.82875</td><td>thiF family protein</td><td>-</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u126826001000i">AT1G68260.1</a></td><td>-0.826716</td><td>thioesterase family protein</td><td>OMAT1P117000</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u127049001000i">AT1G70490.1</a></td><td>-0.823276</td><td>ARFA1D</td><td>OMAT1P117850</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u123069001000i">AT1G30690.1</a></td><td>-0.819165</td><td>SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein</td><td>OMAT1P010760</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u224177001000i">AT2G41770.1</a></td><td>-0.818235</td><td>unknown protein</td><td>OMAT2P110580</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u126903001000i">AT1G69030.1</a></td><td>-0.818224</td><td>INVOLVED IN: biological_process unknown</td><td>OMAT1P117310</td><td>-</td><td>-</td><td>-</td></tr></table><br><a href="/dbfiles/SciNetS_ria227i/cria227s2i/cria227s2ria227u525454001000i/AT5G54540.1-correlation.txt">Get whole results</a><br><br> <HR><b>Over-Representation Analysis Result</b><br><br><table border="1"><tr bgcolor=#FF69B4><td></td><td><i>p</i>-value</td><td> <= 1.05e-14</td><td>:20 terms with high significance</td></a></tr><tr bgcolor=#FFFACD><td>1.05e-14 < </td><td><i>p</i>-value</td><td> <= 8.76e-06</td><td> :With considering multiple testing correction;<br><i>p</i> <= 1.00e-02 / 1142</td></tr><tr bgcolor=#FFFFFF><td>8.76e-06 < </td><td><i>p</i>-value</td><td> <= 1.00e-02</td><td></td></tr></table><br><table border="1"><tr><th>Type of term (*1)</th><th>Depth of the term in ontology tree</th><th>ID/Term</th><th>Description</th><th>Number of genes</th><th>Over-Representative rate (*2)</th><th><i>p</i>-value (*3)</th><th>PosMed <i>p</i>-value (*4)<br> (Link to PosMed)</th><th>Found on gene annotation</th></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0010556</td><td>regulation of macromolecule biosynthetic process</td><td>23/200</td><td>2.33</td><td>5.37e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0010468</td><td>regulation of gene expression</td><td>24/200</td><td>2.25</td><td>6.81e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0031326</td><td>regulation of cellular biosynthetic process</td><td>23/200</td><td>2.29</td><td>7.25e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0009889</td><td>regulation of biosynthetic process</td><td>23/200</td><td>2.29</td><td>7.25e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0006350</td><td>transcription</td><td>23/200</td><td>2.25</td><td>9.27e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0060255</td><td>regulation of macromolecule metabolic process</td><td>24/200</td><td>2.19</td><td>1.04e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0080090</td><td>regulation of primary metabolic process</td><td>23/200</td><td>2.18</td><td>1.49e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0019219</td><td>regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process</td><td>22/200</td><td>2.19</td><td>1.88e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0051171</td><td>regulation of nitrogen compound metabolic process</td><td>22/200</td><td>2.17</td><td>2.17e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0031323</td><td>regulation of cellular metabolic process</td><td>23/200</td><td>2.13</td><td>2.21e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0051252</td><td>regulation of RNA metabolic process</td><td>14/200</td><td>2.68</td><td>2.68e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0019222</td><td>regulation of metabolic process</td><td>24/200</td><td>2.04</td><td>3.17e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0032774</td><td>RNA biosynthetic process</td><td>14/200</td><td>2.56</td><td>4.39e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0090304</td><td>nucleic acid metabolic process</td><td>26/200</td><td>1.73</td><td>2.23e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0034641</td><td>cellular nitrogen compound metabolic process</td><td>31/200</td><td>1.59</td><td>3.46e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0006807</td><td>nitrogen compound metabolic process</td><td>31/200</td><td>1.56</td><td>4.64e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0006139</td><td>nucleobase, nucleoside, nucleotide and nucleic acid metabolic process</td><td>27/200</td><td>1.60</td><td>5.58e-03</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FFFACD><td>C</td><td>5</td><td>GO:0005634</td><td>nucleus</td><td>34/200</td><td>2.17</td><td>5.61e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>3</td><td>GO:0005622</td><td>intracellular</td><td>76/200</td><td>1.43</td><td>1.54e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>3</td><td>GO:0044424</td><td>intracellular part</td><td>73/200</td><td>1.43</td><td>2.03e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>4</td><td>GO:0043231</td><td>intracellular membrane-bounded organelle</td><td>65/200</td><td>1.48</td><td>2.04e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>3</td><td>GO:0043227</td><td>membrane-bounded organelle</td><td>65/200</td><td>1.48</td><td>2.05e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>3</td><td>GO:0043229</td><td>intracellular organelle</td><td>67/200</td><td>1.45</td><td>2.85e-04</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FFFACD><td>M</td><td>4</td><td>GO:0003677</td><td>DNA binding</td><td>31/200</td><td>2.24</td><td>7.96e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>3</td><td>GO:0003700</td><td>transcription factor activity</td><td>25/200</td><td>2.48</td><td>9.90e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>3</td><td>GO:0003676</td><td>nucleic acid binding</td><td>42/200</td><td>1.77</td><td>7.51e-05</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0009047</td><td>stem</td><td>148/200</td><td>1.75</td><td>1.40e-20</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0000230</td><td>inflorescence meristem</td><td>137/200</td><td>1.76</td><td>4.89e-18</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>5</td><td>PO:0000013</td><td>cauline leaf</td><td>134/200</td><td>1.73</td><td>1.14e-16</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0020030</td><td>cotyledon</td><td>130/200</td><td>1.77</td><td>1.19e-16</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>3</td><td>PO:0009013</td><td>meristem</td><td>137/200</td><td>1.71</td><td>1.36e-16</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>5</td><td>PO:0009028</td><td>microsporophyll</td><td>140/200</td><td>1.67</td><td>2.46e-16</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>5</td><td>PO:0009052</td><td>pedicel</td><td>136/200</td><td>1.67</td><td>1.41e-15</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0009026</td><td>sporophyll</td><td>144/200</td><td>1.60</td><td>2.56e-15</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>5</td><td>PO:0009027</td><td>megasporophyll</td><td>138/200</td><td>1.64</td><td>2.97e-15</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>5</td><td>PO:0008037</td><td>seedling</td><td>142/200</td><td>1.61</td><td>3.78e-15</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0009009</td><td>embryo</td><td>149/200</td><td>1.54</td><td>1.05e-14</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0008034</td><td>leaf whorl</td><td>146/200</td><td>1.55</td><td>2.80e-14</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0008033</td><td>phyllome whorl</td><td>146/200</td><td>1.55</td><td>2.80e-14</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0000037</td><td>shoot apex</td><td>138/200</td><td>1.60</td><td>3.08e-14</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009010</td><td>seed</td><td>149/200</td><td>1.52</td><td>3.83e-14</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009001</td><td>fruit</td><td>149/200</td><td>1.52</td><td>6.57e-14</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0006342</td><td>infructescence</td><td>149/200</td><td>1.52</td><td>6.57e-14</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009005</td><td>root</td><td>141/200</td><td>1.57</td><td>7.78e-14</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009025</td><td>leaf</td><td>142/200</td><td>1.54</td><td>2.06e-13</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009031</td><td>sepal</td><td>141/200</td><td>1.53</td><td>9.28e-13</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0020039</td><td>leaf lamina</td><td>131/200</td><td>1.59</td><td>1.19e-12</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0006001</td><td>phyllome</td><td>150/200</td><td>1.46</td><td>1.55e-12</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0020038</td><td>petiole</td><td>124/200</td><td>1.63</td><td>2.05e-12</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009032</td><td>petal</td><td>135/200</td><td>1.54</td><td>4.04e-12</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009049</td><td>inflorescence</td><td>151/200</td><td>1.44</td><td>4.14e-12</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0020091</td><td>male gametophyte</td><td>129/200</td><td>1.56</td><td>1.48e-11</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009046</td><td>flower</td><td>149/200</td><td>1.43</td><td>1.87e-11</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009006</td><td>shoot</td><td>152/200</td><td>1.40</td><td>5.67e-11</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0000084</td><td>sperm cell</td><td>57/200</td><td>1.76</td><td>4.01e-06</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0020097</td><td>generative cell</td><td>57/200</td><td>1.76</td><td>4.01e-06</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>4</td><td>PO:0006345</td><td>pollen tube</td><td>45/200</td><td>1.54</td><td>9.45e-04</td><td>-</td><td>yes</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>PG</td><td>5</td><td>PO:0004507</td><td>D bilateral stage</td><td>140/200</td><td>1.70</td><td>4.09e-17</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>3</td><td>PO:0001050</td><td>leaf development stages</td><td>134/200</td><td>1.74</td><td>7.91e-17</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>4</td><td>PO:0001054</td><td>4 leaf senescence stage</td><td>133/200</td><td>1.73</td><td>2.50e-16</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>5</td><td>PO:0007133</td><td>leaf production</td><td>140/200</td><td>1.66</td><td>3.37e-16</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>4</td><td>PO:0007112</td><td>1 main shoot growth</td><td>140/200</td><td>1.66</td><td>3.44e-16</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>3</td><td>PO:0007134</td><td>A vegetative growth</td><td>140/200</td><td>1.65</td><td>6.79e-16</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>5</td><td>PO:0001081</td><td>F mature embryo stage</td><td>134/200</td><td>1.68</td><td>1.83e-15</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>4</td><td>PO:0007631</td><td>embryo development stages</td><td>143/200</td><td>1.59</td><td>8.68e-15</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>5</td><td>PO:0001078</td><td>E expanded cotyledon stage</td><td>136/200</td><td>1.64</td><td>9.90e-15</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>5</td><td>PO:0001185</td><td>C globular stage</td><td>135/200</td><td>1.65</td><td>1.05e-14</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0001170</td><td>seed development stages</td><td>143/200</td><td>1.58</td><td>1.34e-14</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007616</td><td>4 anthesis</td><td>145/200</td><td>1.50</td><td>1.34e-12</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0007604</td><td>corolla developmental stages</td><td>146/200</td><td>1.48</td><td>2.62e-12</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007600</td><td>3 floral organ development stages</td><td>148/200</td><td>1.45</td><td>6.86e-12</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0007615</td><td>flower development stages</td><td>149/200</td><td>1.42</td><td>3.59e-11</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>PG</td><td>5</td><td>PO:0007605</td><td>androecium developmental stages</td><td>43/200</td><td>1.47</td><td>3.30e-03</td><td>-</td><td>yes</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>nucleus</td><td>-</td><td>33/200</td><td>2.56</td><td>2.05e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>transcription</td><td>-</td><td>34/200</td><td>2.34</td><td>1.08e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>biological_process</td><td>-</td><td>88/200</td><td>1.47</td><td>8.36e-06</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>factor</td><td>-</td><td>35/200</td><td>2.00</td><td>2.57e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>cellular_component</td><td>-</td><td>67/200</td><td>1.37</td><td>1.35e-03</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>molecular_function</td><td>-</td><td>67/200</td><td>1.33</td><td>3.45e-03</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>motif</td><td>-</td><td>11/200</td><td>2.26</td><td>3.77e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>containing</td><td>-</td><td>27/200</td><td>1.62</td><td>4.73e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>regulation</td><td>-</td><td>22/200</td><td>1.66</td><td>6.91e-03</td><td>-</td><td>no</td></tr></table><table><tr><td valign=top>(*1)</td><td>[B]:Biological process(Gene ontology), [C]:Cellular component(Gene ontology), [M]:Molecular function(Gene ontology), [PS]:Plant Structure(Plant ontology), [PG]:Growth and developmental stages(Plant ontology), [KW]:words found in gene description.</td></tr><tr><td valign=top>(*2)</td><td>([# of genes with the term] / [# of sampling (200)]) / ([# of genes with the term among whole genes] / [# of whole genes]) </td></tr><tr><td valign=top>(*3)</td><td>P-values were calculated on hypergeometric distribution in which we found <i>n</i> genes with a annotation term during 200 highly correlated genes, while we had <i>N</i> genes with the term in the whole genes.</td></tr><tr><td valign=top>(*4)</td><td><a href="http://omicspace.riken.jp/PosMed-plus/">PosMed</a> is a system which serve a p-values showing a relationship between the gene and the annotation term based on literature information and Gene-Gene interaction suchas co-expression or protein-protein interactions.</td></tr></table><hr><a href="/db/SciNetS_ria227i/cria227s904i">Top Page</a></body></html>
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