<table style="border-collapse: collapse; width: 951px;" border="0" cellpadding="0" cellspacing="0"><tbody><tr><td width="951px">The integrated databases of protein experiments and structures is developed to secure sustainability, accessibility, utility and publicity <br>of the data produced from multiple large-scale programs that has been promoted by RIKEN. The database integrates <br>not only RIKEN’s original databases, but also imported public databases and ontologies as represented below. </td></tr></tbody></table><br><style>table { }.font0 { color: black; font-size: 11pt; font-weight: 400; font-style: normal; text-decoration: none; font-family: "ＭＳ Ｐゴシック",sans-serif; }.font5 { color: windowtext; font-size: 6pt; font-weight: 400; font-style: normal; text-decoration: none; font-family: "ＭＳ Ｐゴシック",sans-serif; }.font6 { color: windowtext; font-size: 10pt; font-weight: 400; font-style: normal; text-decoration: none; font-family: Arial,sans-serif; }.font7 { color: windowtext; font-size: 10pt; font-weight: 400; font-style: italic; text-decoration: none; font-family: Arial,sans-serif; }.font8 { color: windowtext; font-size: 10pt; font-weight: 400; font-style: normal; text-decoration: none; font-family: Arial,sans-serif; }.font9 { color: black; font-size: 11pt; font-weight: 400; font-style: normal; text-decoration: none; font-family: "ＭＳ Ｐゴシック",monospace; }td { padding-top: 1px; padding-right: 1px; padding-left: 1px; color: black; font-size: 11pt; font-weight: 400; font-style: normal; text-decoration: none; font-family: "ＭＳ Ｐゴシック",sans-serif; vertical-align: middle; border: medium none; white-space: nowrap; }.xl25 { white-space: normal; }.xl26 { text-align: left; white-space: normal; }.xl27 { color: windowtext; font-size: 10pt; font-family: Arial,sans-serif; vertical-align: top; border-width: 0.5pt medium; border-style: solid none; border-color: windowtext -moz-use-text-color; }.xl28 { color: windowtext; font-size: 10pt; font-family: Arial,sans-serif; border-width: 0.5pt medium; border-style: solid none; border-color: windowtext -moz-use-text-color; white-space: normal; }.xl29 { color: windowtext; font-size: 10pt; font-family: Arial,sans-serif; text-align: left; border-width: 0.5pt medium; border-style: solid none; border-color: windowtext -moz-use-text-color; }.xl30 { color: windowtext; font-size: 10pt; font-family: Arial,sans-serif; border-width: 0.5pt medium; border-style: solid none; border-color: windowtext -moz-use-text-color; white-space: normal; }.xl31 { color: windowtext; font-size: 10pt; font-family: Arial,sans-serif; text-align: left; border-width: 0.5pt medium; border-style: solid none; border-color: windowtext -moz-use-text-color; white-space: normal; }.xl32 { color: windowtext; font-size: 10pt; font-family: Arial,sans-serif; vertical-align: top; border-width: 0.5pt medium; border-style: solid none; border-color: windowtext -moz-use-text-color; white-space: normal; }.xl33 { color: windowtext; font-size: 10pt; font-family: Arial,sans-serif; vertical-align: top; border-width: 0.5pt medium 1.5pt; border-style: solid none; border-color: windowtext -moz-use-text-color; white-space: normal; }.xl34 { color: windowtext; font-size: 10pt; font-family: Arial,sans-serif; vertical-align: top; border-width: 0.5pt medium 1.5pt; border-style: solid none; border-color: windowtext -moz-use-text-color; }.xl35 { color: windowtext; font-size: 10pt; font-family: Arial,sans-serif; border-width: 0.5pt medium 1.5pt; border-style: solid none; border-color: windowtext -moz-use-text-color; white-space: normal; }.xl36 { color: windowtext; font-size: 10pt; font-family: Arial,sans-serif; text-align: left; border-width: 0.5pt medium 1.5pt; border-style: solid none; border-color: windowtext -moz-use-text-color; }.xl37 { color: windowtext; font-size: 10pt; font-family: Arial,sans-serif; border-width: 0.5pt medium 1.5pt; border-style: solid none; border-color: windowtext -moz-use-text-color; white-space: normal; }.xl38 { color: windowtext; font-size: 10pt; font-family: Arial,sans-serif; vertical-align: top; border-width: medium medium 0.5pt; border-style: none none solid; border-color: -moz-use-text-color -moz-use-text-color windowtext; }.xl39 { color: windowtext; font-size: 10pt; font-family: Arial,sans-serif; border-width: medium medium 0.5pt; border-style: none none solid; border-color: -moz-use-text-color -moz-use-text-color windowtext; white-space: normal; }.xl40 { color: windowtext; font-size: 10pt; font-family: Arial,sans-serif; text-align: left; border-width: medium medium 0.5pt; border-style: none none solid; border-color: -moz-use-text-color -moz-use-text-color windowtext; }.xl41 { color: windowtext; font-size: 10pt; font-family: Arial,sans-serif; border-width: medium medium 0.5pt; border-style: none none solid; border-color: -moz-use-text-color -moz-use-text-color windowtext; white-space: normal; }.xl42 { color: windowtext; font-size: 10pt; font-family: Arial,sans-serif; border-width: 1.5pt medium 1pt; border-style: solid none; border-color: windowtext -moz-use-text-color; white-space: normal; }.xl43 { color: windowtext; font-size: 10pt; font-family: Arial,sans-serif; text-align: left; border-width: 1.5pt medium 1pt; border-style: solid none; border-color: windowtext -moz-use-text-color; }.xl44 { color: windowtext; font-size: 10pt; font-family: Arial,sans-serif; text-align: left; border-width: 1.5pt medium 1pt; border-style: solid none; border-color: windowtext -moz-use-text-color; white-space: normal; }.xl45 { font-family: "ＭＳ Ｐゴシック",monospace; }.xl46 { color: windowtext; font-size: 10pt; font-family: Arial,sans-serif; border-width: 1.5pt medium 1pt; border-style: solid none; border-color: windowtext -moz-use-text-color; }.xl47 { color: windowtext; font-size: 10pt; font-family: Arial,sans-serif; vertical-align: top; border-width: 0.5pt medium medium; border-style: solid none none; border-color: windowtext -moz-use-text-color -moz-use-text-color; white-space: normal; }.xl48 { color: windowtext; font-size: 10pt; font-family: Arial,sans-serif; vertical-align: top; white-space: normal; }.xl49 { color: windowtext; font-size: 10pt; font-family: Arial,sans-serif; vertical-align: top; border-width: medium medium 0.5pt; border-style: none none solid; border-color: -moz-use-text-color -moz-use-text-color windowtext; white-space: normal; }.xl50 { color: windowtext; font-size: 10pt; font-family: Arial,sans-serif; vertical-align: top; white-space: normal; }ruby { }rt { color: windowtext; font-size: 6pt; font-weight: 400; font-style: normal; text-decoration: none; font-family: "ＭＳ Ｐゴシック",sans-serif; display: none; }</style><table style="border-collapse: collapse; width: 693px; height: 759px;" border="0" cellpadding="0" cellspacing="0"> <colgroup><col width="77"> <col width="13"> <col width="162"> <col width="45"> <col width="154"> </colgroup><tbody><tr bgcolor="mediumpurple" height="19"> <td style="font-family: yui-tmp;" class="xl42" height="19" width="77"><strong style="color: #ffffff; font-family: yui-tmp;">Category</strong></td> <td style="font-family: yui-tmp;" colspan="2" class="xl46" width="175"><strong style="color: #ffffff; font-family: yui-tmp;">Title<font class="font8">^*</font></strong></td> <td style="font-family: yui-tmp;" class="xl43" width="45"><strong style="color: #ffffff; font-family: yui-tmp;">Num.</strong></td> <td style="font-family: yui-tmp;" class="xl44" width="154"><strong style="color: #ffffff; font-family: yui-tmp;">Reference</strong></td> </tr><tr height="17"> <td rowspan="6" class="xl50" style="border-bottom: 0.5pt solid black;" height="58" width="77"><a href="/db/SciNetS_ria266i/cria266s1i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">Structural Data </span></a></td> <td class="xl38"><br></td> <td class="xl39" width="162"><a href="/db/SciNetS_ria1i/cria1u1i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">Protein Data Bank (PDB)<br></span></a></td> <td class="xl40">70347</td> <td class="xl41" width="154"><a href="http://www.ncbi.nlm.nih.gov/pubmed/10592235">Burman, H. M.<font class="font7">et al</font><font class="font6">. 2000</font></a></td> </tr> <tr height="24"> <td class="xl27" height="24">*+</td> <td class="xl28" width="162"><a href="/db/SciNetS_ria266i/cria266s4i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">RSGI (RIKEN Structural Genomics/Proteomics Initiative) structure<br></span></a></td> <td class="xl29">2745</td> <td class="xl30" width="154"><br></td></tr><tr height="24"> <td class="xl27" height="17">*+</td> <td class="xl28" width="162"><a href="/db/SciNetS_ria266i/cria266s7i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">SSBC (RIKEN Systems and Structural Biology Center) structure<font class="font6"></font></span></a><br></td> <td class="xl29">66</td> <td class="xl30" width="154"><br></td></tr><tr height="24"> <td class="xl27" height="17">*+</td> <td class="xl28" width="162"><a href="/db/SciNetS_ria266i/cria266s16i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">Bacpedia (RIKEN Harima SPring-8 Center) structure<font class="font6"></font></span></a><br></td> <td class="xl29">209</td> <td class="xl30" width="154"><br></td></tr><tr height="24"> <td class="xl27" height="17">*+</td> <td class="xl28" width="162"><a href="/db/SciNetS_ria266i/cria266s14i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">HATODAS (RIKEN Harima Heavy Atom Database) structure<font class="font6"></font></span></a><br></td> <td class="xl29">575</td> <td class="xl30" width="154"><br></td></tr><tr height="24"> <td class="xl27" height="17">*</td> <td class="xl28" width="162"><a href="/db/SciNetS_rib46i/crib46s11i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">RIKEN Arabidopsis Protein record<font class="font6"></font></span></a><br></td> <td class="xl29">33</td> <td class="xl30" width="154"><a href="http://www.ncbi.nlm.nih.gov/pubmed/11103994"><font class="font6">Yokoyama, S. </font><font class="font7">et al</font><font class="font6">. 2000</font></a></td></tr><tr height="17"> <td rowspan="3" class="xl47" style="border-bottom: 0.5pt solid black;" height="58" width="77"><a href="/db/SciNetS_ria266i/cria266s2i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">Experimental Data<br></span></a></td> <td class="xl27">*</td> <td class="xl28" width="162"><a href="/db/SciNetS_ria87i/cria87s4i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">SSBC (RIKEN Systems and Structural Biology Center)</span></a></td> <td class="xl29">3596</td> <td class="xl30" width="154"><br></td></tr><tr height="24"> <td class="xl27" height="17">*</td> <td class="xl28" width="162"><a href="/db/SciNetS_ria87i/cria87s3i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">Bacpedia (RIKEN Harima SPring-8 Center)</span></a></td> <td class="xl29">160181</td> <td class="xl30" width="154"><a href="http://www.ncbi.nlm.nih.gov/pubmed/23633602"><font class="font6">Asada, Y. </font><font class="font7">et al</font><font class="font6">. 2013</font></a></td></tr><tr height="24"> <td class="xl27" height="17">*</td> <td class="xl28" width="162"><a href="/db/SciNetS_rib108i/crib108u1i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">HATODAS (RIKEN Harima Heavy Atom Database)</span></a></td> <td class="xl29">3169</td> <td class="xl30" width="154"><!--<a href="http://scripts.iucr.org/cgi-bin/paper?S0907444905019670"><a href="http://dx.doi.org/10.1107/S0907444905019670"><font class="font6">Sugahara, M. </font><font class="font7">et al</font><font class="font6">. 2005</font></a>--><a href="http://www.ncbi.nlm.nih.gov/pubmed/16131765"><font class="font6">Sugahara, M. </font><font class="font7">et al</font><font class="font6">. 2005</font></a><br><!--<a href="http://scripts.iucr.org/cgi-bin/paper?he5418"><font class="font6">Sugahara, M.</font><font class="font7">et al</font><font class="font6">. 2009</font></a>--><a href="http://dx.doi.org/10.1107/S0021889809012370"><font class="font6">Sugahara, M.</font><font class="font7">et al</font><font class="font6">. 2009</font></a><br><a href="http://www.ncbi.nlm.nih.gov/pubmed/23451229"><font class="font6">Sugahara, M. </font><font class="font7">et al</font><font class="font6">. 2013</font></a><br><a href="http://www.ncbi.nlm.nih.gov/pubmed/23633602"><font class="font6">Asada, Y. </font><font class="font7">et al</font><font class="font6">. 2013</font></a></td></tr><tr height="17"> <td rowspan="3" class="xl47" style="border-bottom: 0.5pt solid black;" height="58" width="77"><a href="/db/SciNetS_ria266i/cria266s10i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">Sequence Data</span></a></td> <td class="xl27"><br></td> <td class="xl28" width="162"><a href="/db/SciNetS_ria141i/cria141s1i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">RefSeq Protein Human</span></a></td> <td class="xl29">37861</td> <td rowspan="2" class="xl31" width="154"><a href="http://www.ncbi.nlm.nih.gov/pubmed/17130148">Pruitt, K. D.<font class="font7"> et al. </font><font class="font6">2007</font></a></td></tr><tr height="24"> <td class="xl27" height="17">　</td> <td class="xl28" width="162"><a href="/db/SciNetS_ria118i/cria118s1i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">RefSeq Protein Mouse </span></a></td> <td class="xl29">35703</td></tr><tr height="24"> <td class="xl27" height="17">　</td> <td class="xl28" width="162"><a href="/db/SciNetS_ria214i/cria214s1i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">Swiss-Prot </span></a></td> <td class="xl29">340974</td> <td class="xl31" width="154"><a href="http://www.ncbi.nlm.nih.gov/pubmed/19843607">UniProt Consortium<font class="font6">. 2010</font></a><br><a href="http://www.ncbi.nlm.nih.gov/pubmed/19426475">Jain, E. <font class="font7"> et al. </font><font class="font6">2009</font></a></td></tr> <tr height="17"> <td rowspan="3" class="xl47" style="border-bottom: 0.5pt solid black;" height="41" width="77"><a href="/db/SciNetS_ria266i/cria266s11i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">Protein Domain Databases<br></span></a></td> <td class="xl27"><br></td> <td class="xl28" width="162"><a href="/db/SciNetS_ria95i/cria95u1i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;"><font class="font6">SMART</font></span></a></td> <td class="xl29">895</td> <td class="xl30" width="154"><a href="http://www.ncbi.nlm.nih.gov/pubmed/9600884">Schultz, J. <font class="font7">et al</font><font class="font6">. 1998</font></a><br><a href="http://www.ncbi.nlm.nih.gov/pubmed/18978020">Letunic, I.<font class="font7">et al</font><font class="font6">. 2009</font></a></td></tr><tr height="24"> <td class="xl27" height="24"><br></td> <td class="xl28" width="162"><a href="/db/SciNetS_rib124i/crib124s1i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">InterPro</span></a></td> <td class="xl29">21123</td> <td class="xl30" width="154"><a href="http://www.ncbi.nlm.nih.gov/pubmed/18940856">Hunter, S. <font class="font7">et al</font><font class="font6">. 2009</font></a></td></tr><tr height="24"> <td class="xl27" height="24"><br></td> <td class="xl28" width="162"><a href="/db/SciNetS_rib125i/crib125s1i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">Pfam</span></a></td> <td class="xl29">11912</td> <td class="xl30" width="154"><a href="http://www.ncbi.nlm.nih.gov/pubmed/18039703">Finn, R. D. <font class="font7">et al</font><font class="font6">. 2008</font></a></td></tr><tr height="17"> <td rowspan="1" class="xl47" style="border-bottom: 0.5pt solid black;" height="17" width="77"><a href="/db/SciNetS_ria266i/cria266s12i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">Experimental Material<br></span></a></td> <td class="xl27"><br></td> <td class="xl28" width="162"><a href="/db/SciNetS_ria266i/cria266s18i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">ChEBI (Chemical Entities of Biological Interest)</span></a></td> <td class="xl29">25873</td> <td class="xl30" width="154"><a href="http://www.ncbi.nlm.nih.gov/pubmed/17932057">Degtyarenko, K. <font class="font7">et al.</font><font class="font6"> 2008</font></a></td></tr><tr height="17"> <td rowspan="1" class="xl47" style="border-bottom: 0.5pt solid black;" height="17" width="77"><a href="/db/SciNetS_ria266i/cria266s13i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">Experimental Method<br></span></a></td> <td class="xl27"><br></td> <td class="xl28" width="162"><a href="/db/SciNetS_ria266i/cria266s17i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">FIX (Physico-chemical Methods and Properties)</span></a></td> <td class="xl29">1163</td> <td class="xl30" width="154">&nbsp;</td></tr><tr height="17"> <td rowspan="1" class="xl47" style="border-bottom: 0.5pt solid black;" height="17" width="77"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">Related Ontology<br></span></td> <td class="xl27"><br></td> <td class="xl28" width="162"><a href="/db/SciNetS_ria250i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">GO (Gene Ontology)</span></a></td> <td class="xl29">33908</td> <td class="xl30" width="154"><a href="http://www.ncbi.nlm.nih.gov/pubmed/10802651">Ashburner, M. <font class="font7">et al.</font><font class="font6"> 2000</font></a></td></tr><tr height="18"> <td class="xl45" colspan="5" height="18"><font class="font9">^*)</font><font class="font0"> Databases based on research activity of RIKEN are marked with astarisks at the head of titles.</font></td></tr><tr height="18"> <td class="xl45" colspan="5" height="18"><font class="font9">⁺⁾</font><font class="font0"> Protein Data Bank (PDB) structure data related to research activity of RIKEN, are marked with crosses at the head of titles.</font></td></tr></tbody></table> <table style="border-collapse: collapse; width: 951px;" border="0" cellpadding="0" cellspacing="0"><tbody><tr><td width="951px">The integrated databases of protein experiments and structures is developed to secure sustainability, accessibility, utility and publicity <br>of the data produced from multiple large-scale programs that has been promoted by RIKEN. The database integrates <br>not only RIKEN’s original databases, but also imported public databases and ontologies as represented below. </td></tr></tbody></table><br><style>table { }.font0 { color: black; font-size: 11pt; font-weight: 400; font-style: normal; text-decoration: none; font-family: "ＭＳ Ｐゴシック",sans-serif; }.font5 { color: windowtext; font-size: 6pt; font-weight: 400; font-style: normal; text-decoration: none; font-family: "ＭＳ Ｐゴシック",sans-serif; }.font6 { color: windowtext; font-size: 10pt; font-weight: 400; font-style: normal; text-decoration: none; font-family: Arial,sans-serif; }.font7 { color: windowtext; font-size: 10pt; font-weight: 400; font-style: italic; text-decoration: none; font-family: Arial,sans-serif; }.font8 { color: windowtext; font-size: 10pt; font-weight: 400; font-style: normal; text-decoration: none; font-family: Arial,sans-serif; }.font9 { color: black; font-size: 11pt; font-weight: 400; font-style: normal; text-decoration: none; font-family: "ＭＳ Ｐゴシック",monospace; }td { padding-top: 1px; padding-right: 1px; padding-left: 1px; color: black; font-size: 11pt; font-weight: 400; font-style: normal; text-decoration: none; font-family: "ＭＳ Ｐゴシック",sans-serif; vertical-align: middle; border: medium none; white-space: nowrap; }.xl25 { white-space: normal; }.xl26 { text-align: left; white-space: normal; }.xl27 { color: windowtext; font-size: 10pt; font-family: Arial,sans-serif; vertical-align: top; border-width: 0.5pt medium; border-style: solid none; border-color: windowtext -moz-use-text-color; }.xl28 { color: windowtext; font-size: 10pt; font-family: Arial,sans-serif; border-width: 0.5pt medium; border-style: solid none; border-color: windowtext -moz-use-text-color; white-space: normal; }.xl29 { color: windowtext; font-size: 10pt; font-family: Arial,sans-serif; text-align: left; border-width: 0.5pt medium; border-style: solid none; border-color: windowtext -moz-use-text-color; }.xl30 { color: windowtext; font-size: 10pt; font-family: Arial,sans-serif; border-width: 0.5pt medium; 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font-size: 6pt; font-weight: 400; font-style: normal; text-decoration: none; font-family: "ＭＳ Ｐゴシック",sans-serif; display: none; }</style><table style="border-collapse: collapse; width: 693px; height: 759px;" border="0" cellpadding="0" cellspacing="0"> <colgroup><col width="77"> <col width="13"> <col width="162"> <col width="45"> <col width="154"> </colgroup><tbody><tr bgcolor="mediumpurple" height="19"> <td style="font-family: yui-tmp;" class="xl42" height="19" width="77"><strong style="color: #ffffff; font-family: yui-tmp;">Category</strong></td> <td style="font-family: yui-tmp;" colspan="2" class="xl46" width="175"><strong style="color: #ffffff; font-family: yui-tmp;">Title<font class="font8">^*</font></strong></td> <td style="font-family: yui-tmp;" class="xl43" width="45"><strong style="color: #ffffff; font-family: yui-tmp;">Num.</strong></td> <td style="font-family: yui-tmp;" class="xl44" width="154"><strong style="color: #ffffff; font-family: yui-tmp;">Reference</strong></td> </tr><tr height="17"> <td rowspan="6" class="xl50" style="border-bottom: 0.5pt solid black;" height="58" width="77"><a href="/db/SciNetS_ria266i/cria266s1i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">Structural Data </span></a></td> <td class="xl38"><br></td> <td class="xl39" width="162"><a href="/db/SciNetS_ria1i/cria1u1i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">Protein Data Bank (PDB)<br></span></a></td> <td class="xl40">70347</td> <td class="xl41" width="154"><a href="http://www.ncbi.nlm.nih.gov/pubmed/10592235">Burman, H. M.<font class="font7">et al</font><font class="font6">. 2000</font></a></td> </tr> <tr height="24"> <td class="xl27" height="24">*+</td> <td class="xl28" width="162"><a href="/db/SciNetS_ria266i/cria266s4i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">RSGI (RIKEN Structural Genomics/Proteomics Initiative) structure<br></span></a></td> <td class="xl29">2745</td> <td class="xl30" width="154"><br></td></tr><tr height="24"> <td class="xl27" height="17">*+</td> <td class="xl28" width="162"><a href="/db/SciNetS_ria266i/cria266s7i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">SSBC (RIKEN Systems and Structural Biology Center) structure<font class="font6"></font></span></a><br></td> <td class="xl29">66</td> <td class="xl30" width="154"><br></td></tr><tr height="24"> <td class="xl27" height="17">*+</td> <td class="xl28" width="162"><a href="/db/SciNetS_ria266i/cria266s16i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">Bacpedia (RIKEN Harima SPring-8 Center) structure<font class="font6"></font></span></a><br></td> <td class="xl29">209</td> <td class="xl30" width="154"><br></td></tr><tr height="24"> <td class="xl27" height="17">*+</td> <td class="xl28" width="162"><a href="/db/SciNetS_ria266i/cria266s14i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">HATODAS (RIKEN Harima Heavy Atom Database) structure<font class="font6"></font></span></a><br></td> <td class="xl29">575</td> <td class="xl30" width="154"><br></td></tr><tr height="24"> <td class="xl27" height="17">*</td> <td class="xl28" width="162"><a href="/db/SciNetS_rib46i/crib46s11i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">RIKEN Arabidopsis Protein record<font class="font6"></font></span></a><br></td> <td class="xl29">33</td> <td class="xl30" width="154"><a href="http://www.ncbi.nlm.nih.gov/pubmed/11103994"><font class="font6">Yokoyama, S. </font><font class="font7">et al</font><font class="font6">. 2000</font></a></td></tr><tr height="17"> <td rowspan="3" class="xl47" style="border-bottom: 0.5pt solid black;" height="58" width="77"><a href="/db/SciNetS_ria266i/cria266s2i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">Experimental Data<br></span></a></td> <td class="xl27">*</td> <td class="xl28" width="162"><a href="/db/SciNetS_ria87i/cria87s4i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">SSBC (RIKEN Systems and Structural Biology Center)</span></a></td> <td class="xl29">3596</td> <td class="xl30" width="154"><br></td></tr><tr height="24"> <td class="xl27" height="17">*</td> <td class="xl28" width="162"><a href="/db/SciNetS_ria87i/cria87s3i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">Bacpedia (RIKEN Harima SPring-8 Center)</span></a></td> <td class="xl29">160181</td> <td class="xl30" width="154"><a href="http://www.ncbi.nlm.nih.gov/pubmed/23633602"><font class="font6">Asada, Y. </font><font class="font7">et al</font><font class="font6">. 2013</font></a></td></tr><tr height="24"> <td class="xl27" height="17">*</td> <td class="xl28" width="162"><a href="/db/SciNetS_rib108i/crib108u1i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">HATODAS (RIKEN Harima Heavy Atom Database)</span></a></td> <td class="xl29">3169</td> <td class="xl30" width="154"><!--<a href="http://scripts.iucr.org/cgi-bin/paper?S0907444905019670"><a href="http://dx.doi.org/10.1107/S0907444905019670"><font class="font6">Sugahara, M. </font><font class="font7">et al</font><font class="font6">. 2005</font></a>--><a href="http://www.ncbi.nlm.nih.gov/pubmed/16131765"><font class="font6">Sugahara, M. </font><font class="font7">et al</font><font class="font6">. 2005</font></a><br><!--<a href="http://scripts.iucr.org/cgi-bin/paper?he5418"><font class="font6">Sugahara, M.</font><font class="font7">et al</font><font class="font6">. 2009</font></a>--><a href="http://dx.doi.org/10.1107/S0021889809012370"><font class="font6">Sugahara, M.</font><font class="font7">et al</font><font class="font6">. 2009</font></a><br><a href="http://www.ncbi.nlm.nih.gov/pubmed/23451229"><font class="font6">Sugahara, M. </font><font class="font7">et al</font><font class="font6">. 2013</font></a><br><a href="http://www.ncbi.nlm.nih.gov/pubmed/23633602"><font class="font6">Asada, Y. </font><font class="font7">et al</font><font class="font6">. 2013</font></a></td></tr><tr height="17"> <td rowspan="3" class="xl47" style="border-bottom: 0.5pt solid black;" height="58" width="77"><a href="/db/SciNetS_ria266i/cria266s10i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">Sequence Data</span></a></td> <td class="xl27"><br></td> <td class="xl28" width="162"><a href="/db/SciNetS_ria141i/cria141s1i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">RefSeq Protein Human</span></a></td> <td class="xl29">37861</td> <td rowspan="2" class="xl31" width="154"><a href="http://www.ncbi.nlm.nih.gov/pubmed/17130148">Pruitt, K. D.<font class="font7"> et al. </font><font class="font6">2007</font></a></td></tr><tr height="24"> <td class="xl27" height="17">　</td> <td class="xl28" width="162"><a href="/db/SciNetS_ria118i/cria118s1i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">RefSeq Protein Mouse </span></a></td> <td class="xl29">35703</td></tr><tr height="24"> <td class="xl27" height="17">　</td> <td class="xl28" width="162"><a href="/db/SciNetS_ria214i/cria214s1i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">Swiss-Prot </span></a></td> <td class="xl29">340974</td> <td class="xl31" width="154"><a href="http://www.ncbi.nlm.nih.gov/pubmed/19843607">UniProt Consortium<font class="font6">. 2010</font></a><br><a href="http://www.ncbi.nlm.nih.gov/pubmed/19426475">Jain, E. <font class="font7"> et al. </font><font class="font6">2009</font></a></td></tr> <tr height="17"> <td rowspan="3" class="xl47" style="border-bottom: 0.5pt solid black;" height="41" width="77"><a href="/db/SciNetS_ria266i/cria266s11i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">Protein Domain Databases<br></span></a></td> <td class="xl27"><br></td> <td class="xl28" width="162"><a href="/db/SciNetS_ria95i/cria95u1i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;"><font class="font6">SMART</font></span></a></td> <td class="xl29">895</td> <td class="xl30" width="154"><a href="http://www.ncbi.nlm.nih.gov/pubmed/9600884">Schultz, J. <font class="font7">et al</font><font class="font6">. 1998</font></a><br><a href="http://www.ncbi.nlm.nih.gov/pubmed/18978020">Letunic, I.<font class="font7">et al</font><font class="font6">. 2009</font></a></td></tr><tr height="24"> <td class="xl27" height="24"><br></td> <td class="xl28" width="162"><a href="/db/SciNetS_rib124i/crib124s1i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">InterPro</span></a></td> <td class="xl29">21123</td> <td class="xl30" width="154"><a href="http://www.ncbi.nlm.nih.gov/pubmed/18940856">Hunter, S. <font class="font7">et al</font><font class="font6">. 2009</font></a></td></tr><tr height="24"> <td class="xl27" height="24"><br></td> <td class="xl28" width="162"><a href="/db/SciNetS_rib125i/crib125s1i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">Pfam</span></a></td> <td class="xl29">11912</td> <td class="xl30" width="154"><a href="http://www.ncbi.nlm.nih.gov/pubmed/18039703">Finn, R. D. <font class="font7">et al</font><font class="font6">. 2008</font></a></td></tr><tr height="17"> <td rowspan="1" class="xl47" style="border-bottom: 0.5pt solid black;" height="17" width="77"><a href="/db/SciNetS_ria266i/cria266s12i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">Experimental Material<br></span></a></td> <td class="xl27"><br></td> <td class="xl28" width="162"><a href="/db/SciNetS_ria266i/cria266s18i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">ChEBI (Chemical Entities of Biological Interest)</span></a></td> <td class="xl29">25873</td> <td class="xl30" width="154"><a href="http://www.ncbi.nlm.nih.gov/pubmed/17932057">Degtyarenko, K. <font class="font7">et al.</font><font class="font6"> 2008</font></a></td></tr><tr height="17"> <td rowspan="1" class="xl47" style="border-bottom: 0.5pt solid black;" height="17" width="77"><a href="/db/SciNetS_ria266i/cria266s13i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">Experimental Method<br></span></a></td> <td class="xl27"><br></td> <td class="xl28" width="162"><a href="/db/SciNetS_ria266i/cria266s17i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">FIX (Physico-chemical Methods and Properties)</span></a></td> <td class="xl29">1163</td> <td class="xl30" width="154">&nbsp;</td></tr><tr height="17"> <td rowspan="1" class="xl47" style="border-bottom: 0.5pt solid black;" height="17" width="77"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">Related Ontology<br></span></td> <td class="xl27"><br></td> <td class="xl28" width="162"><a href="/db/SciNetS_ria250i"><span style="color: windowtext; font-size: 10pt; text-decoration: none; font-family: Arial,sans-serif;">GO (Gene Ontology)</span></a></td> <td class="xl29">33908</td> <td class="xl30" width="154"><a href="http://www.ncbi.nlm.nih.gov/pubmed/10802651">Ashburner, M. <font class="font7">et al.</font><font class="font6"> 2000</font></a></td></tr><tr height="18"> <td class="xl45" colspan="5" height="18"><font class="font9">^*)</font><font class="font0"> Databases based on research activity of RIKEN are marked with astarisks at the head of titles.</font></td></tr><tr height="18"> <td class="xl45" colspan="5" height="18"><font class="font9">⁺⁾</font><font class="font0"> Protein Data Bank (PDB) structure data related to research activity of RIKEN, are marked with crosses at the head of titles.</font></td></tr></tbody></table> Home