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PDBj (Protein Data Bank Japan) maintains a centralized PDB archive of macromolecular structures and provides integrated tools, in collaboration with the RCSB, the BMRB in USA and the PDBe in EU. PDBj is supported by JST-NBDC and Osaka University.

[1gk6] replaced from '1e7t'

Summary Structural Experimental Function Sequence Neighbor Download Link


<Asymmetric unit>
= <Biological unit>

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( jV3 / Jmol ) *1
PDB ID1gk6  sequence information (FASTA format)   
RELATED PDB ID1gk4, 1gk7, 2zta
DescriptorVIMENTIN
TitleHUMAN VIMENTIN COIL 2B FRAGMENT LINKED TO GCN4 LEUCINE ZIPPER (Z2B)
Functional KeywordsVIMENTIN, INTERMEDIATE FILAMENT, DIMER, PARALLEL COILED COIL, HEPTAD REPEAT, LEUCINE ZIPPER, FUSION PROTEIN
Biological source [UNP - P08670] Homo sapiens (Human)
Organ source [UNP - P08670] Lymphoma
[UNP - P08670] Testis
[UNP - P08670] Embryo, Placenta, and Stomach
[UNP - P08670] Adipose tissue, and Coronary artery
[UNP - P08670] Cervix, Placenta, and Testis
[UNP - P08670] Mammary carcinoma
[UNP - P08670] T-cell
[UNP - P08670] Brain, Cajal-Retzius cell, and Fetal brain cortex
[UNP - P08670] Fibroblast
[UNP - P08670] Osteosarcoma
[UNP - P08670] Epithelium
Total number of polymer chains2
Total molecular weight13852.2 (the details in Structural Details Page)
AuthorsStrelkov, S.V. , Herrmann, H. , Geisler, N. , Zimbelmann, R. , Aebi, U. , Burkhard, P. (deposition date : 2001-08-08, release date : 2002-03-15)
Primary citationStrelkov, S. , Herrmann, H. , Geisler, N. , Wedig, T. , Zimbelmann, R. , Aebi, U. , Burkhard, P.
Conserved Segments 1A and 2B of the Intermediate Filament Dimer: Their Atomic Structures and Role in Filament Assembly.
Embo J., 21:1255 - , 2002.(PubMed : 11889032)  (DOI: 10.1093/EMBOJ/21.6.1255)
Experimental methodX-RAY DIFFRACTION ( 1.9[Å] )
Other Database Information
Yorodumi , CATH , CE , FSSP , SCOP , VAST , UniProt ( P03069, P08670 ) , eF-site , PISA