OMAT1P009910 (↑ Click "Links", if this line appears at the beginning.)

Other supporting information

Gene Model

Correlation Plot


Expression profile (Values are plotted in Log(2) values.)

Genes with related expresssion profiles.
Positively Correlated Genes
GensPCC Definition Overlap geneDefinition Overlap gene(antisense)Definition
OMAT4P110620 0.93619 - AT4G35800 NRPB1 (RNA POLYMERASE II LARGE SUBUNIT) - -
OMAT1P000020 0.921363 - AT1G01040,AT1G01046,ath-MIR838 [AT1G01040]DCL1 (DICER-LIKE 1), [AT1G01046]MIR838a, [ath-MIR838]ath-MIR838 - -
OMAT1P013860 0.92031 - AT1G50360 VIIIA - -
OMAT1P015440 0.917676 - AT1G55325 FUNCTIONS IN: molecular_function unknown - -
OMAT4P003300 0.917568 - AT4G12780 heat shock protein binding - -
OMAT4P110880 0.912872 - AT4G36515,AT4G36520 [AT4G36515]unknown protein, [AT4G36520]heat shock protein binding - -
OMAT1P010490 0.908736 - AT1G29950,AT1G29952,AT1G29951 [AT1G29950]transcription factor/ transcription regulator, [AT1G29952]CPuORF34 (Conserved peptide upstream open reading frame 34), [AT1G29951]CPuORF35 (Conserved peptide upstream open reading frame 35) - -
OMAT4P005130 0.908396 - AT4G17350 phosphoinositide binding - -
OMAT4P109210 0.904545 - AT4G32260,AT4G32270 [AT4G32260]ATP synthase family, [AT4G32270]unknown protein - -
OMAT3P017560 0.901829 - AT3G61690 unknown protein - -
Negatively Correlated Genes
GensPCC Definition Overlap geneDefinition Overlap gene(antisense)Definition
OMAT1P007470 -0.767882 - AT1G20390 transposable element gene - -
OMAT1P115300 -0.726547 - AT1G62510 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein - -
OMAT5P106710 -0.726246 - AT5G23040 CDF1 (CELL GROWTH DEFECT FACTOR 1) - -
OMAT4P110110 -0.705765 - AT4G34620 SSR16 (SMALL SUBUNIT RIBOSOMAL PROTEIN 16) - -
OMAT2P003350 -0.675838 - AT2G19790 clathrin adaptor complex small chain family protein - -
OMAT1P105040 -0.675591 - AT1G15175 other RNA - -
OMAT1P017040 -0.662607 - - - AT1G62510 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
OMAT3P006170 -0.661558 - - - AT3G16640 TCTP (TRANSLATIONALLY CONTROLLED TUMOR PROTEIN)
OMAT1P000540 -0.659016 - - - AT1G02280 TOC33 (TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 33)
OMAT5P014560 -0.655044 - - - AT5G50920 CLPC1

Get whole results

Over-Representation Analysis Result

p-value <= 3.84e-21:20 terms with high significance
3.84e-21 < p-value <= 8.76e-06 :With considering multiple testing correction;
p <= 1.00e-02 / 1142
8.76e-06 < p-value <= 1.00e-02

Type of term (*1) Depth of the term in ontology tree ID/Term Description Number of genes Over-Representative rate (*2) p-value (*3) PosMed p-value (*4)
(Link to PosMed)		 Found on gene annotation
B 5 GO:0006796 phosphate metabolic process 19/200 2.86 1.27e-05 - no
B 4 GO:0006793 phosphorus metabolic process 19/200 2.86 1.29e-05 - no
B 3 GO:0019222 regulation of metabolic process 25/200 2.12 1.29e-04 - no
B 3 GO:0050789 regulation of biological process 32/200 1.85 2.42e-04 - no
B 5 GO:0006464 protein modification process 21/200 2.02 7.83e-04 - no
B 4 GO:0043412 macromolecule modification 22/200 1.94 1.03e-03 - no
B 5 GO:0010468 regulation of gene expression 21/200 1.97 1.06e-03 - no
B 4 GO:0060255 regulation of macromolecule metabolic process 21/200 1.92 1.49e-03 - no
B 3 GO:0006810 transport 20/200 1.95 1.51e-03 - no
B 3 GO:0051234 establishment of localization 20/200 1.95 1.56e-03 - no
B 4 GO:0031323 regulation of cellular metabolic process 20/200 1.85 2.86e-03 - no
B 4 GO:0080090 regulation of primary metabolic process 19/200 1.80 4.60e-03 - no
B 3 GO:0043170 macromolecule metabolic process 53/200 1.37 5.16e-03 - no
B 4 GO:0044260 cellular macromolecule metabolic process 49/200 1.39 5.33e-03 - no
B 3 GO:0050794 regulation of cellular process 25/200 1.64 5.39e-03 - no
C 4 GO:0005886 plasma membrane 31/200 2.50 7.67e-07 3.64E-21 yes
C 3 GO:0016020 membrane 50/200 1.83 6.09e-06 3.64E-21 yes
C 3 GO:0044464 cell part 119/200 1.30 3.43e-05 - yes
C 5 GO:0005634 nucleus 29/200 1.85 4.35e-04 - no
M 5 GO:0016773 phosphotransferase activity, alcohol group as acceptor 19/200 3.06 4.75e-06 - no
M 4 GO:0016772 transferase activity, transferring phosphorus-containing groups 24/200 2.62 5.65e-06 - no
M 3 GO:0005515 protein binding 33/200 2.11 1.46e-05 - no
M 5 GO:0016301 kinase activity 21/200 2.61 2.05e-05 - no
M 3 GO:0000166 nucleotide binding 29/200 2.20 2.19e-05 - no
M 5 GO:0030554 adenyl nucleotide binding 21/200 2.32 1.15e-04 - no
M 4 GO:0001883 purine nucleoside binding 21/200 2.32 1.15e-04 - no
M 3 GO:0001882 nucleoside binding 21/200 2.32 1.19e-04 - no
M 5 GO:0015075 ion transmembrane transporter activity 10/200 3.19 3.43e-04 - no
M 4 GO:0022891 substrate-specific transmembrane transporter activity 12/200 2.72 5.34e-04 - no
M 3 GO:0022857 transmembrane transporter activity 14/200 2.49 5.68e-04 - no
M 3 GO:0022892 substrate-specific transporter activity 13/200 2.52 7.51e-04 - no
M 4 GO:0017076 purine nucleotide binding 21/200 2.02 7.54e-04 - no
M 5 GO:0032555 purine ribonucleotide binding 20/200 2.04 8.85e-04 - no
M 4 GO:0032553 ribonucleotide binding 20/200 2.04 8.85e-04 - no
M 3 GO:0016740 transferase activity 28/200 1.71 1.84e-03 - no
M 5 GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 10/200 2.25 5.42e-03 - no
M 4 GO:0016817 hydrolase activity, acting on acid anhydrides 10/200 2.23 5.81e-03 - no
PS 3 PO:0009013 meristem 161/200 2.00 2.20e-32 - yes
PS 4 PO:0000230 inflorescence meristem 157/200 2.02 3.38e-31 - yes
PS 5 PO:0020039 leaf lamina 153/200 1.86 5.41e-25 - yes
PS 5 PO:0009027 megasporophyll 153/200 1.82 5.18e-24 - yes
PS 5 PO:0009052 pedicel 150/200 1.84 1.06e-23 - yes
PS 4 PO:0009047 stem 152/200 1.80 4.23e-23 - yes
PS 3 PO:0009005 root 157/200 1.74 5.81e-23 - yes
PS 5 PO:0008037 seedling 155/200 1.76 1.12e-22 - yes
PS 4 PO:0009025 leaf 158/200 1.72 1.88e-22 - yes
PS 5 PO:0000013 cauline leaf 143/200 1.85 8.54e-22 - yes
PS 3 PO:0009031 sepal 157/200 1.70 1.48e-21 - yes
PS 4 PO:0000037 shoot apex 151/200 1.75 1.92e-21 - yes
PS 3 PO:0009032 petal 152/200 1.73 3.96e-21 - yes
PS 4 PO:0009026 sporophyll 154/200 1.71 5.19e-21 - yes
PS 4 PO:0009009 embryo 158/200 1.64 8.62e-20 - yes
PS 3 PO:0006001 phyllome 163/200 1.59 1.03e-19 - yes
PS 5 PO:0009028 microsporophyll 146/200 1.74 1.13e-19 - yes
PS 3 PO:0009010 seed 158/200 1.61 3.90e-19 - yes
PS 5 PO:0020038 petiole 137/200 1.80 6.28e-19 - yes
PS 4 PO:0009001 fruit 158/200 1.61 7.33e-19 - yes
PS 3 PO:0006342 infructescence 158/200 1.61 7.33e-19 - yes
PS 5 PO:0008034 leaf whorl 154/200 1.63 1.26e-18 - yes
PS 4 PO:0008033 phyllome whorl 154/200 1.63 1.26e-18 - yes
PS 3 PO:0009006 shoot 163/200 1.50 1.29e-16 - yes
PS 4 PO:0009049 inflorescence 159/200 1.52 3.18e-16 - yes
PS 5 PO:0009046 flower 158/200 1.52 5.75e-16 - yes
PS 4 PO:0020030 cotyledon 127/200 1.73 3.95e-15 - yes
PS 3 PO:0020091 male gametophyte 132/200 1.59 7.12e-13 - yes
PS 3 PO:0000034 vascular system 10/200 3.06 4.84e-04 - no
PS 4 PO:0005679 epidermis 23/200 1.86 1.48e-03 - no
PS 3 PO:0009014 dermal tissue 23/200 1.86 1.49e-03 - no
PS 5 PO:0006035 shoot epidermis 20/200 1.79 4.28e-03 - no
PS 5 PO:0006016 leaf epidermis 19/200 1.71 8.22e-03 - no
PS 3 PO:0004013 epidermal cell 20/200 1.68 8.57e-03 - no
PG 5 PO:0001185 C globular stage 153/200 1.86 3.10e-25 - yes
PG 4 PO:0001054 4 leaf senescence stage 146/200 1.90 6.55e-24 - yes
PG 3 PO:0001050 leaf development stages 146/200 1.90 6.98e-24 - yes
PG 4 PO:0007631 embryo development stages 157/200 1.74 6.36e-23 - yes
PG 3 PO:0001170 seed development stages 157/200 1.74 1.09e-22 - yes
PG 5 PO:0001081 F mature embryo stage 146/200 1.84 3.10e-22 - yes
PG 5 PO:0001078 E expanded cotyledon stage 149/200 1.80 5.25e-22 - yes
PG 5 PO:0004507 D bilateral stage 147/200 1.78 3.84e-21 - yes
PG 5 PO:0007133 leaf production 147/200 1.75 4.07e-20 - yes
PG 4 PO:0007112 1 main shoot growth 147/200 1.75 4.17e-20 - yes
PG 3 PO:0007134 A vegetative growth 147/200 1.74 8.92e-20 - yes
PG 4 PO:0007600 3 floral organ development stages 161/200 1.58 8.13e-19 - yes
PG 5 PO:0007604 corolla developmental stages 158/200 1.60 1.17e-18 - yes
PG 4 PO:0007616 4 anthesis 156/200 1.61 2.17e-18 - yes
PG 3 PO:0007615 flower development stages 161/200 1.54 2.42e-17 - yes
PG 5 PO:0007605 androecium developmental stages 42/200 1.43 5.61e-03 - no
KW 0 plasma - 32/200 2.79 4.16e-08 3.64E-21 yes
KW 0 regulation - 32/200 2.42 1.07e-06 - no
KW 0 amino - 24/200 2.79 1.88e-06 - no
KW 0 membrane - 49/200 1.84 6.08e-06 3.64E-21 yes
KW 0 threonine - 21/200 2.80 6.93e-06 - no
KW 0 transmembrane - 20/200 2.76 1.40e-05 - no
KW 0 ipr000719 - 18/200 2.89 1.79e-05 - no
KW 0 ipr011009 - 18/200 2.78 2.95e-05 - no
KW 0 serine - 22/200 2.47 3.24e-05 - no
KW 0 ipr008271 - 15/200 3.07 3.61e-05 - no
KW 0 phosphorylation - 17/200 2.77 5.04e-05 - no
KW 0 leucine - 15/200 2.86 8.45e-05 - no
KW 0 ipr001611 - 10/200 3.54 1.42e-04 - no
KW 0 nucleus - 26/200 2.02 2.25e-04 - no
KW 0 tyrosine - 11/200 3.10 2.60e-04 - no
KW 0 kinase - 22/200 2.08 3.89e-04 - no
KW 0 transporter - 16/200 2.30 6.63e-04 - no
KW 0 ipr017441 - 11/200 2.56 1.37e-03 - no
KW 0 ipr017442 - 12/200 2.28 2.62e-03 - no
KW 0 repeat - 23/200 1.77 2.74e-03 - no
KW 0 transport - 18/200 1.85 4.26e-03 - no
KW 0 related - 41/200 1.46 4.55e-03 - no
KW 0 region - 24/200 1.66 5.24e-03 - no
KW 0 transcription - 24/200 1.65 5.60e-03 - no
KW 0 active - 15/200 1.83 8.41e-03 - no
KW 0 associated - 13/200 1.90 9.12e-03 - no
(*1) [B]:Biological process(Gene ontology), [C]:Cellular component(Gene ontology), [M]:Molecular function(Gene ontology), [PS]:Plant Structure(Plant ontology), [PG]:Growth and developmental stages(Plant ontology), [KW]:words found in gene description.
(*2) ([# of genes with the term] / [# of sampling (200)]) / ([# of genes with the term among whole genes] / [# of whole genes])
(*3) P-values were calculated on hypergeometric distribution in which we found n genes with a annotation term during 200 highly correlated genes, while we had N genes with the term in the whole genes.
(*4) PosMed is a system which serve a p-values showing a relationship between the gene and the annotation term based on literature information and Gene-Gene interaction suchas co-expression or protein-protein interactions.
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