OMAT1P013080 (↑ Click "Links", if this line appears at the beginning.)

Other supporting information

Gene Model

Correlation Plot


Expression profile (Values are plotted in Log(2) values.)

Genes with related expresssion profiles.
Positively Correlated Genes
GensPCC Definition Overlap geneDefinition Overlap gene(antisense)Definition
OMAT1P121410 0.994574 - AT1G80540 unknown protein - -
OMAT5P104480 0.984889 - AT5G15800 SEP1 (SEPALLATA1) - -
OMAT5P015990 0.978456 - AT5G54400 methyltransferase - -
OMAT1P009620 0.973782 - AT1G27050 ATHB54 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 54) - -
OMAT3P008130 0.970847 - AT3G21310 unknown protein - -
OMAT3P100580 0.968916 - AT3G02310 SEP2 (SEPALLATA 2) - -
OMAT1P008460 0.966929 - AT1G23010 LPR1 (Low Phosphate Root1) - -
OMAT2P006620 0.966292 - AT2G29050 ATRBL1 (Arabidopsis thaliana Rhomboid-like 1) - -
OMAT1P007260 0.96617 - AT1G19830 auxin-responsive protein, putative - -
OMAT1P107860 0.965992 - AT1G24260 SEP3 (SEPALLATA3) - -
Negatively Correlated Genes
GensPCC Definition Overlap geneDefinition Overlap gene(antisense)Definition
OMAT2P005910 -0.807062 - AT2G27050 EIL1 (ETHYLENE-INSENSITIVE3-LIKE 1) - -
OMAT4P100900 -0.716821 - AT4G02520 ATGSTF2 (GLUTATHIONE S-TRANSFERASE PHI 2) - -
OMAT3P110440 -0.711069 - AT3G46510 PUB13 (PLANT U-BOX 13) - -
OMAT1P104440 -0.707668 - AT1G13750 calcineurin-like phosphoesterase family protein AT1G13740 AFP2 (ABI FIVE BINDING PROTEIN 2)
OMAT3P109030 -0.691191 - AT3G27390 unknown protein - -
OMAT5P102710 -0.683208 - AT5G10030 TGA4 (TGACG MOTIF-BINDING FACTOR 4) - -
OMAT5P106710 -0.682168 - AT5G23040 CDF1 (CELL GROWTH DEFECT FACTOR 1) - -
OMAT5P114290 -0.680694 - AT5G54810 TSB1 (TRYPTOPHAN SYNTHASE BETA-SUBUNIT 1) - -
OMAT1P107170 -0.66861 - AT1G22360 AtUGT85A2 (UDP-glucosyl transferase 85A2) - -
OMAT3P103750 -0.665135 - AT3G11450 DNAJ heat shock N-terminal domain-containing protein / cell division protein-related - -

Get whole results

Over-Representation Analysis Result

p-value <= 1.08e-08:20 terms with high significance
1.08e-08 < p-value <= 8.76e-06 :With considering multiple testing correction;
p <= 1.00e-02 / 1142
8.76e-06 < p-value <= 1.00e-02

Type of term (*1) Depth of the term in ontology tree ID/Term Description Number of genes Over-Representative rate (*2) p-value (*3) PosMed p-value (*4)
(Link to PosMed)		 Found on gene annotation
B 5 GO:0048569 post-embryonic organ development 10/200 8.48 3.31e-08 - no
B 4 GO:0009908 flower development 11/200 6.04 3.51e-07 - no
B 4 GO:0048513 organ development 16/200 3.61 2.60e-06 - no
B 4 GO:0048731 system development 16/200 3.61 2.65e-06 - no
B 3 GO:0048856 anatomical structure development 24/200 2.68 3.69e-06 - no
B 3 GO:0007275 multicellular organismal development 26/200 2.45 8.27e-06 - no
B 3 GO:0022414 reproductive process 18/200 2.99 1.13e-05 - no
B 3 GO:0003006 reproductive developmental process 17/200 3.09 1.20e-05 - no
B 3 GO:0048869 cellular developmental process 11/200 3.96 2.61e-05 - no
B 5 GO:0051252 regulation of RNA metabolic process 15/200 2.87 8.01e-05 - no
B 5 GO:0006350 transcription 23/200 2.25 9.27e-05 7.00E-06 no
B 3 GO:0009791 post-embryonic development 16/200 2.70 1.03e-04 - no
B 4 GO:0048608 reproductive structure development 14/200 2.87 1.28e-04 - no
B 5 GO:0032774 RNA biosynthetic process 15/200 2.74 1.38e-04 - no
B 4 GO:0080090 regulation of primary metabolic process 23/200 2.18 1.49e-04 - no
B 4 GO:0009889 regulation of biosynthetic process 22/200 2.19 1.92e-04 - no
B 5 GO:0031326 regulation of cellular biosynthetic process 22/200 2.19 1.92e-04 - no
B 4 GO:0044283 small molecule biosynthetic process 13/200 2.86 2.09e-04 - no
B 4 GO:0031323 regulation of cellular metabolic process 23/200 2.13 2.21e-04 - no
B 4 GO:0060255 regulation of macromolecule metabolic process 23/200 2.10 2.64e-04 - no
B 3 GO:0050794 regulation of cellular process 29/200 1.90 2.88e-04 - no
B 3 GO:0019222 regulation of metabolic process 24/200 2.04 3.17e-04 - no
B 5 GO:0010556 regulation of macromolecule biosynthetic process 21/200 2.13 3.76e-04 - no
B 5 GO:0010468 regulation of gene expression 22/200 2.06 4.44e-04 - no
B 5 GO:0019219 regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 21/200 2.09 4.76e-04 - no
B 3 GO:0050789 regulation of biological process 31/200 1.79 5.19e-04 - no
B 4 GO:0051171 regulation of nitrogen compound metabolic process 21/200 2.07 5.45e-04 - no
B 3 GO:0009653 anatomical structure morphogenesis 10/200 2.97 6.15e-04 - no
B 4 GO:0010033 response to organic substance 15/200 2.24 1.19e-03 - no
B 3 GO:0044281 small molecule metabolic process 18/200 2.00 1.78e-03 - no
B 3 GO:0009719 response to endogenous stimulus 12/200 2.33 2.17e-03 - no
B 4 GO:0044249 cellular biosynthetic process 42/200 1.49 2.71e-03 - no
B 3 GO:0009058 biosynthetic process 42/200 1.44 5.08e-03 - no
B 5 GO:0016070 RNA metabolic process 16/200 1.88 5.39e-03 - no
C 5 GO:0031225 anchored to membrane 11/200 7.40 3.85e-08 - no
C 4 GO:0031224 intrinsic to membrane 17/200 3.17 8.43e-06 - no
C 3 GO:0044464 cell part 121/200 1.32 9.90e-06 - yes
C 3 GO:0012505 endomembrane system 44/200 1.81 2.89e-05 - no
C 5 GO:0005634 nucleus 29/200 1.85 4.35e-04 - no
C 3 GO:0044425 membrane part 17/200 2.15 1.05e-03 - yes
C 3 GO:0016020 membrane 39/200 1.42 8.38e-03 - yes
M 4 GO:0003677 DNA binding 35/200 2.53 1.19e-07 1.00E-11 no
M 3 GO:0003700 transcription factor activity 28/200 2.77 3.22e-07 - no
M 3 GO:0003676 nucleic acid binding 40/200 1.69 3.17e-04 - no
M 3 GO:0022857 transmembrane transporter activity 13/200 2.31 1.65e-03 - no
M 4 GO:0022891 substrate-specific transmembrane transporter activity 11/200 2.50 1.71e-03 - no
M 3 GO:0022892 substrate-specific transporter activity 12/200 2.32 2.22e-03 - no
M 3 GO:0005515 protein binding 25/200 1.60 7.41e-03 1.00E-11 no
PS 4 PO:0009001 fruit 145/200 1.47 5.17e-12 - yes
PS 3 PO:0006342 infructescence 145/200 1.47 5.17e-12 - yes
PS 5 PO:0009046 flower 150/200 1.44 6.58e-12 - yes
PS 4 PO:0009049 inflorescence 150/200 1.43 1.19e-11 - yes
PS 3 PO:0009031 sepal 138/200 1.49 2.02e-11 - yes
PS 5 PO:0009052 pedicel 127/200 1.56 2.09e-11 - yes
PS 3 PO:0009006 shoot 152/200 1.40 5.67e-11 - yes
PS 3 PO:0009010 seed 142/200 1.45 6.59e-11 - yes
PS 3 PO:0009032 petal 131/200 1.49 1.97e-10 - yes
PS 3 PO:0006001 phyllome 144/200 1.40 6.62e-10 - yes
PS 4 PO:0009009 embryo 138/200 1.43 9.68e-10 - yes
PS 5 PO:0008034 leaf whorl 133/200 1.41 1.08e-08 - yes
PS 4 PO:0008033 phyllome whorl 133/200 1.41 1.08e-08 - yes
PS 5 PO:0009027 megasporophyll 122/200 1.45 1.97e-08 - yes
PS 4 PO:0009026 sporophyll 123/200 1.37 9.41e-07 - yes
PS 4 PO:0000037 shoot apex 110/200 1.28 2.49e-04 - yes
PS 3 PO:0020091 male gametophyte 99/200 1.19 8.88e-03 - no
PG 5 PO:0001185 C globular stage 135/200 1.65 1.05e-14 - yes
PG 3 PO:0001170 seed development stages 140/200 1.55 3.75e-13 - yes
PG 4 PO:0007631 embryo development stages 139/200 1.54 7.30e-13 - yes
PG 4 PO:0007616 4 anthesis 140/200 1.44 2.06e-10 - yes
PG 3 PO:0007615 flower development stages 144/200 1.37 4.22e-09 - yes
PG 4 PO:0007600 3 floral organ development stages 141/200 1.38 5.67e-09 - yes
PG 5 PO:0007604 corolla developmental stages 138/200 1.40 5.71e-09 - yes
PG 5 PO:0001078 E expanded cotyledon stage 118/200 1.42 2.08e-07 - yes
PG 5 PO:0004507 D bilateral stage 111/200 1.35 1.61e-05 - yes
PG 5 PO:0001081 F mature embryo stage 108/200 1.36 1.70e-05 - yes
KW 0 globular - 23/200 6.13 6.92e-13 - no
KW 0 anchored - 11/200 7.17 5.46e-08 - no
KW 0 transcription - 34/200 2.34 1.08e-06 7.00E-06 no
KW 0 system - 47/200 1.94 2.30e-06 - no
KW 0 endomembrane - 45/200 1.90 6.43e-06 - no
KW 0 anthesis - 30/200 2.28 7.45e-06 - no
KW 0 regulation - 29/200 2.19 2.22e-05 - no
KW 0 development - 19/200 2.72 2.57e-05 - no
KW 0 conserved - 29/200 2.14 3.47e-05 - no
KW 0 differentiation - 31/200 2.05 4.48e-05 - no
KW 0 dependent - 28/200 2.09 7.17e-05 - no
KW 0 major - 10/200 3.50 1.56e-04 - no
KW 0 electron - 11/200 3.09 2.68e-04 - no
KW 0 cotyledon - 14/200 2.66 2.88e-04 - no
KW 0 factor - 32/200 1.83 2.99e-04 1.00E-11 no
KW 0 petal - 28/200 1.92 3.08e-04 - no
KW 0 glycosyl - 12/200 2.81 3.91e-04 - no
KW 0 expanded - 12/200 2.75 4.89e-04 - no
KW 0 region - 27/200 1.87 5.86e-04 - yes
KW 0 expansion - 27/200 1.84 7.66e-04 - no
KW 0 carrier - 11/200 2.74 7.70e-04 - no
KW 0 stage - 33/200 1.70 8.53e-04 - no
KW 0 stimulus - 11/200 2.55 1.41e-03 - no
KW 0 terminal - 32/200 1.66 1.57e-03 2.00E-05 no
KW 0 nucleus - 23/200 1.78 2.53e-03 - no
KW 0 transporter - 14/200 2.01 4.46e-03 - no
KW 0 transmembrane - 14/200 1.93 6.56e-03 - no
KW 0 membrane - 38/200 1.43 8.81e-03 - no
(*1) [B]:Biological process(Gene ontology), [C]:Cellular component(Gene ontology), [M]:Molecular function(Gene ontology), [PS]:Plant Structure(Plant ontology), [PG]:Growth and developmental stages(Plant ontology), [KW]:words found in gene description.
(*2) ([# of genes with the term] / [# of sampling (200)]) / ([# of genes with the term among whole genes] / [# of whole genes])
(*3) P-values were calculated on hypergeometric distribution in which we found n genes with a annotation term during 200 highly correlated genes, while we had N genes with the term in the whole genes.
(*4) PosMed is a system which serve a p-values showing a relationship between the gene and the annotation term based on literature information and Gene-Gene interaction suchas co-expression or protein-protein interactions.
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