OMAT1P013220 (↑ Click "Links", if this line appears at the beginning.)

Other supporting information

Gene Model

Correlation Plot


Expression profile (Values are plotted in Log(2) values.)

Genes with related expresssion profiles.
Positively Correlated Genes
GensPCC Definition Overlap geneDefinition Overlap gene(antisense)Definition
OMAT2P010385 0.895758 - - - AT2G39380 ATEXO70H2 (EXOCYST SUBUNIT EXO70 FAMILY PROTEIN H2)
OMAT2P012040 0.892603 - AT2G43680 IQD14 - -
OMAT5P009750 0.876216 - AT5G35450 disease resistance protein (CC-NBS-LRR class), putative - -
OMAT3P003100 0.866124 - AT3G09020 alpha 1,4-glycosyltransferase family protein / glycosyltransferase sugar-binding DXD motif-containing protein - -
OMAT3P110140 0.861329 - AT3G45160 unknown protein - -
OMAT1P021560 0.859922 - AT1G74250 DNAJ heat shock N-terminal domain-containing protein - -
OMAT3P013900 0.859498 - AT3G51710 curculin-like (mannose-binding) lectin family protein / PAN domain-containing protein - -
OMAT5P011190 0.858189 - AT5G40910 disease resistance protein (TIR-NBS-LRR class), putative - -
OMAT4P104930 0.857011 - AT4G19370 unknown protein - -
OMAT5P017850 0.856953 - AT5G58787 zinc finger (C3HC4-type RING finger) family protein - -
Negatively Correlated Genes
GensPCC Definition Overlap geneDefinition Overlap gene(antisense)Definition
OMAT1P102290 -0.672239 - AT1G07570 APK1A - -
OMAT3P110130 -0.616233 - - - AT3G45140 LOX2 (LIPOXYGENASE 2)
OMAT2P010090 -0.578988 - AT2G38540 LP1 - -
OMAT1P120250 -0.576579 - AT1G77390 CYCA1 - -
OMAT3P007880 -0.575172 - AT3G20670 HTA13 - -
OMAT1P002790 -0.571191 - AT1G08465 YAB2 (YABBY2) - -
OMAT3P103830 -0.557292 - AT3G11650 NHL2 - -
OMAT1P009940 -0.551087 - AT1G27950 LTPG1 (GLYCOSYLPHOSPHATIDYLINOSITOL-ANCHORED LIPID PROTEIN TRANSFER 1) - -
OMAT2P109260 -0.54219 - - - AT2G38540 LP1
OMAT1P108050 -0.540605 - AT1G25450 KCS5 (3-KETOACYL-COA SYNTHASE 5) - -

Get whole results

Over-Representation Analysis Result

p-value <= 2.63e-13:20 terms with high significance
2.63e-13 < p-value <= 8.76e-06 :With considering multiple testing correction;
p <= 1.00e-02 / 1142
8.76e-06 < p-value <= 1.00e-02

Type of term (*1) Depth of the term in ontology tree ID/Term Description Number of genes Over-Representative rate (*2) p-value (*3) PosMed p-value (*4)
(Link to PosMed)		 Found on gene annotation
B 3 GO:0050789 regulation of biological process 39/200 2.25 4.59e-07 - no
B 3 GO:0050794 regulation of cellular process 34/200 2.23 3.27e-06 - no
B 4 GO:0006952 defense response 14/200 3.08 5.97e-05 - no
B 3 GO:0023046 signaling process 11/200 3.39 1.13e-04 - no
B 3 GO:0023060 signal transmission 11/200 3.39 1.13e-04 - no
B 3 GO:0051707 response to other organism 11/200 3.28 1.54e-04 - no
B 4 GO:0007165 signal transduction 10/200 3.48 1.64e-04 - no
B 3 GO:0009607 response to biotic stimulus 11/200 3.04 3.07e-04 - no
B 5 GO:0010556 regulation of macromolecule biosynthetic process 21/200 2.13 3.76e-04 - no
B 5 GO:0006796 phosphate metabolic process 16/200 2.41 3.96e-04 - no
B 4 GO:0006793 phosphorus metabolic process 16/200 2.41 4.00e-04 - no
B 5 GO:0010468 regulation of gene expression 22/200 2.06 4.44e-04 - no
B 4 GO:0009889 regulation of biosynthetic process 21/200 2.09 4.88e-04 - no
B 5 GO:0031326 regulation of cellular biosynthetic process 21/200 2.09 4.88e-04 - no
B 5 GO:0006350 transcription 21/200 2.06 6.04e-04 - no
B 4 GO:0060255 regulation of macromolecule metabolic process 22/200 2.01 6.41e-04 - no
B 4 GO:0080090 regulation of primary metabolic process 21/200 1.99 9.09e-04 - no
B 5 GO:0019219 regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 20/200 1.99 1.15e-03 - no
B 4 GO:0031323 regulation of cellular metabolic process 21/200 1.94 1.28e-03 - no
B 4 GO:0051171 regulation of nitrogen compound metabolic process 20/200 1.97 1.31e-03 - no
B 3 GO:0019222 regulation of metabolic process 22/200 1.87 1.68e-03 - no
B 5 GO:0006464 protein modification process 20/200 1.92 1.83e-03 - no
B 4 GO:0044260 cellular macromolecule metabolic process 51/200 1.45 1.90e-03 - no
B 5 GO:0090304 nucleic acid metabolic process 26/200 1.73 2.23e-03 - no
B 3 GO:0006807 nitrogen compound metabolic process 32/200 1.61 2.50e-03 - no
B 4 GO:0006139 nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 28/200 1.66 2.92e-03 - no
B 3 GO:0006950 response to stress 22/200 1.77 3.23e-03 - no
B 4 GO:0043412 macromolecule modification 20/200 1.76 4.95e-03 - no
B 4 GO:0010033 response to organic substance 13/200 1.94 7.65e-03 - no
B 3 GO:0043170 macromolecule metabolic process 52/200 1.34 8.23e-03 - no
C 4 GO:0005886 plasma membrane 34/200 2.74 2.42e-08 - no
C 3 GO:0016020 membrane 48/200 1.75 2.87e-05 - no
C 5 GO:0005634 nucleus 30/200 1.92 1.95e-04 - no
C 3 GO:0044464 cell part 115/200 1.26 3.24e-04 - yes
M 3 GO:0003700 transcription factor activity 26/200 2.57 3.29e-06 - no
M 3 GO:0005515 protein binding 33/200 2.11 1.46e-05 - no
M 3 GO:0004871 signal transducer activity 10/200 4.45 1.84e-05 - no
M 4 GO:0003677 DNA binding 28/200 2.02 1.28e-04 - no
M 4 GO:0016772 transferase activity, transferring phosphorus-containing groups 21/200 2.29 1.40e-04 - no
M 5 GO:0016301 kinase activity 19/200 2.36 1.79e-04 - no
M 5 GO:0030554 adenyl nucleotide binding 20/200 2.21 3.09e-04 - no
M 4 GO:0001883 purine nucleoside binding 20/200 2.21 3.09e-04 - no
M 3 GO:0001882 nucleoside binding 20/200 2.21 3.20e-04 - no
M 5 GO:0015075 ion transmembrane transporter activity 10/200 3.19 3.43e-04 - no
M 3 GO:0003676 nucleic acid binding 39/200 1.64 6.25e-04 - no
M 3 GO:0000166 nucleotide binding 25/200 1.89 7.44e-04 - no
M 5 GO:0016773 phosphotransferase activity, alcohol group as acceptor 14/200 2.26 1.54e-03 - no
M 3 GO:0022857 transmembrane transporter activity 13/200 2.31 1.65e-03 - no
M 4 GO:0022891 substrate-specific transmembrane transporter activity 11/200 2.50 1.71e-03 - no
M 4 GO:0017076 purine nucleotide binding 20/200 1.93 1.76e-03 - no
M 5 GO:0032555 purine ribonucleotide binding 19/200 1.94 2.09e-03 - no
M 4 GO:0032553 ribonucleotide binding 19/200 1.94 2.09e-03 - no
M 3 GO:0022892 substrate-specific transporter activity 11/200 2.13 6.07e-03 - no
M 3 GO:0016740 transferase activity 26/200 1.59 6.91e-03 - no
PS 4 PO:0000230 inflorescence meristem 149/200 1.92 2.17e-25 - yes
PS 3 PO:0009013 meristem 150/200 1.87 2.57e-24 - yes
PS 4 PO:0009047 stem 147/200 1.74 5.59e-20 - yes
PS 3 PO:0009005 root 150/200 1.67 1.32e-18 - yes
PS 5 PO:0008037 seedling 148/200 1.68 2.20e-18 - yes
PS 4 PO:0009025 leaf 149/200 1.62 5.30e-17 - yes
PS 5 PO:0000013 cauline leaf 134/200 1.73 1.14e-16 - yes
PS 5 PO:0020039 leaf lamina 139/200 1.69 1.49e-16 - yes
PS 4 PO:0020030 cotyledon 129/200 1.76 3.91e-16 - yes
PS 4 PO:0009009 embryo 149/200 1.54 1.05e-14 - yes
PS 3 PO:0009010 seed 149/200 1.52 3.83e-14 - yes
PS 4 PO:0009001 fruit 149/200 1.52 6.57e-14 - yes
PS 3 PO:0006342 infructescence 149/200 1.52 6.57e-14 - yes
PS 4 PO:0009049 inflorescence 153/200 1.46 4.59e-13 - yes
PS 3 PO:0006001 phyllome 151/200 1.47 5.18e-13 - yes
PS 5 PO:0009046 flower 152/200 1.46 7.52e-13 - yes
PS 5 PO:0008034 leaf whorl 143/200 1.52 7.79e-13 - yes
PS 4 PO:0008033 phyllome whorl 143/200 1.52 7.79e-13 - yes
PS 3 PO:0009006 shoot 155/200 1.43 2.34e-12 - yes
PS 5 PO:0009028 microsporophyll 131/200 1.56 5.14e-12 - yes
PS 4 PO:0000037 shoot apex 133/200 1.55 6.18e-12 - yes
PS 3 PO:0009031 sepal 139/200 1.50 7.40e-12 - yes
PS 3 PO:0009032 petal 133/200 1.52 2.95e-11 - yes
PS 4 PO:0009026 sporophyll 135/200 1.50 4.03e-11 - yes
PS 5 PO:0009027 megasporophyll 127/200 1.51 2.63e-10 - yes
PS 5 PO:0020038 petiole 117/200 1.54 1.49e-09 - yes
PS 5 PO:0009052 pedicel 118/200 1.45 5.51e-08 - yes
PS 3 PO:0020091 male gametophyte 115/200 1.39 1.70e-06 - yes
PG 3 PO:0007134 A vegetative growth 144/200 1.70 4.77e-18 - yes
PG 5 PO:0007133 leaf production 141/200 1.68 1.00e-16 - yes
PG 4 PO:0007112 1 main shoot growth 141/200 1.68 1.02e-16 - yes
PG 4 PO:0001054 4 leaf senescence stage 129/200 1.68 2.46e-14 - yes
PG 3 PO:0001050 leaf development stages 129/200 1.68 2.58e-14 - yes
PG 5 PO:0007604 corolla developmental stages 150/200 1.52 3.09e-14 - yes
PG 4 PO:0007600 3 floral organ development stages 151/200 1.48 2.63e-13 - yes
PG 3 PO:0007615 flower development stages 153/200 1.46 4.97e-13 - yes
PG 4 PO:0007616 4 anthesis 144/200 1.48 3.86e-12 - yes
PG 4 PO:0007631 embryo development stages 133/200 1.48 2.80e-10 - yes
PG 3 PO:0001170 seed development stages 133/200 1.47 3.98e-10 - yes
PG 5 PO:0004507 D bilateral stage 123/200 1.49 2.21e-09 - yes
PG 5 PO:0001078 E expanded cotyledon stage 122/200 1.47 8.86e-09 - yes
PG 5 PO:0001081 F mature embryo stage 118/200 1.48 1.29e-08 - yes
PG 5 PO:0001185 C globular stage 117/200 1.43 2.12e-07 - yes
KW 0 plasma - 34/200 2.97 3.40e-09 - no
KW 0 ipr017441 - 16/200 3.73 1.73e-06 - no
KW 0 regulation - 31/200 2.35 3.04e-06 - no
KW 0 membrane - 49/200 1.84 6.08e-06 - no
KW 0 dimerisation - 11/200 4.57 6.25e-06 - no
KW 0 resistance - 12/200 4.22 6.58e-06 - no
KW 0 ipr008271 - 16/200 3.28 9.45e-06 - no
KW 0 nucleus - 29/200 2.25 1.40e-05 - no
KW 0 phosphorylation - 17/200 2.77 5.04e-05 - no
KW 0 transcription - 30/200 2.07 5.13e-05 - no
KW 0 ipr017442 - 15/200 2.85 8.79e-05 - no
KW 0 receptor - 14/200 2.94 9.72e-05 - no
KW 0 response - 34/200 1.90 9.73e-05 - no
KW 0 transmembrane - 18/200 2.48 1.36e-04 - no
KW 0 finger - 21/200 2.27 1.58e-04 - no
KW 0 regulator - 10/200 3.42 1.90e-04 - no
KW 0 ipr000719 - 16/200 2.57 1.90e-04 - no
KW 0 ipr011009 - 16/200 2.47 2.92e-04 - no
KW 0 amino - 19/200 2.21 4.29e-04 - no
KW 0 threonine - 17/200 2.27 5.72e-04 - no
KW 0 region - 27/200 1.87 5.86e-04 - no
KW 0 defense - 10/200 2.87 8.31e-04 - no
KW 0 factor - 30/200 1.71 1.30e-03 - no
KW 0 kinase - 20/200 1.89 2.15e-03 - no
KW 0 active - 16/200 1.95 3.70e-03 - no
KW 0 serine - 17/200 1.91 3.80e-03 - no
KW 0 transport - 18/200 1.85 4.26e-03 - no
KW 0 signal - 10/200 2.28 4.91e-03 - no
KW 0 related - 40/200 1.42 7.66e-03 - no
KW 0 conserved - 22/200 1.63 9.07e-03 - no
(*1) [B]:Biological process(Gene ontology), [C]:Cellular component(Gene ontology), [M]:Molecular function(Gene ontology), [PS]:Plant Structure(Plant ontology), [PG]:Growth and developmental stages(Plant ontology), [KW]:words found in gene description.
(*2) ([# of genes with the term] / [# of sampling (200)]) / ([# of genes with the term among whole genes] / [# of whole genes])
(*3) P-values were calculated on hypergeometric distribution in which we found n genes with a annotation term during 200 highly correlated genes, while we had N genes with the term in the whole genes.
(*4) PosMed is a system which serve a p-values showing a relationship between the gene and the annotation term based on literature information and Gene-Gene interaction suchas co-expression or protein-protein interactions.
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