OMAT1P016360 (↑ Click "Links", if this line appears at the beginning.)

Other supporting information

Gene Model

Correlation Plot



Expression profile (Values are plotted in Log(2) values.)


Genes with related expresssion profiles.
Positively Correlated Genes
GensPCC Definition Overlap geneDefinition Overlap gene(antisense)Definition
OMAT1P003020 0.950275 - AT1G08930 ERD6 (EARLY RESPONSE TO DEHYDRATION 6) - -
OMAT2P012370 0.940424 - AT2G44490 PEN2 (PENETRATION 2) - -
OMAT5P020740 0.92913 - AT5G66790 protein kinase family protein - -
OMAT1P001140 0.902571 - AT1G03740 ATP binding / kinase/ protein kinase/ protein serine/threonine kinase - -
OMAT4P100480 0.898043 - AT4G01090 extra-large G-protein-related - -
OMAT5P110840 0.88845 - AT5G44290 protein kinase family protein - -
OMAT3P013540 0.877391 - AT3G50950 disease resistance protein (CC-NBS-LRR class), putative - -
OMAT1P103530 0.877045 - AT1G10920 LOV1 - -
OMAT4P101730 0.870102 - AT4G08850 kinase - -
OMAT5P118030 0.864544 - AT5G65600,AT5G65609 [AT5G65600]legume lectin family protein / protein kinase family protein, [AT5G65609]unknown protein - -
Negatively Correlated Genes
GensPCC Definition Overlap geneDefinition Overlap gene(antisense)Definition
OMAT2P011600 -0.750098 - AT2G42680 MBF1A (MULTIPROTEIN BRIDGING FACTOR 1A) - -
OMAT1P009940 -0.745333 - AT1G27950 LTPG1 (GLYCOSYLPHOSPHATIDYLINOSITOL-ANCHORED LIPID PROTEIN TRANSFER 1) - -
OMAT4P002220 -0.744008 - AT4G09030 AGP10 (ARABINOGALACTAN PROTEIN 10) - -
OMAT3P003060 -0.74238 - AT3G08970 ATERDJ3A - -
OMAT1P019790 -0.729876 - AT1G69680 FUNCTIONS IN: molecular_function unknown - -
OMAT4P010370 -0.728616 - AT4G31300 PBA1 - -
OMAT2P111590 -0.717479 - AT2G45070 SEC61 BETA - -
OMAT3P002740 -0.717467 - AT3G07680 emp24/gp25L/p24 family protein - -
OMAT1P009930 -0.712336 - AT1G27950 LTPG1 (GLYCOSYLPHOSPHATIDYLINOSITOL-ANCHORED LIPID PROTEIN TRANSFER 1) - -
OMAT1P113270 -0.708792 - AT1G53750 RPT1A (REGULATORY PARTICLE TRIPLE-A 1A) - -

Get whole results


Over-Representation Analysis Result

p-value <= 9.42e-24:20 terms with high significance
9.42e-24 < p-value <= 8.76e-06 :With considering multiple testing correction;
p <= 1.00e-02 / 1142
8.76e-06 < p-value <= 1.00e-02

Type of term (*1) Depth of the term in ontology tree ID/Term Description Number of genes Over-Representative rate (*2) p-value (*3) PosMed p-value (*4)
(Link to PosMed)
Found on gene annotation
B 4 GO:0006952 defense response 41/200 9.01 3.41e-28 3.45E-17 yes
B 3 GO:0006950 response to stress 52/200 4.19 6.96e-20 - yes
B 3 GO:0006955 immune response 23/200 12.14 1.62e-19 3.32E-16 yes
B 4 GO:0045087 innate immune response 22/200 12.40 5.73e-19 3.23E-17 yes
B 3 GO:0008219 cell death 20/200 13.80 2.11e-18 3.69E-16 no
B 4 GO:0012501 programmed cell death 18/200 14.39 3.86e-17 - no
B 3 GO:0009607 response to biotic stimulus 23/200 6.36 3.11e-13 - yes
B 3 GO:0051707 response to other organism 22/200 6.57 5.04e-13 - yes
B 5 GO:0006915 apoptosis 12/200 14.05 4.01e-12 - no
B 5 GO:0050832 defense response to fungus 10/200 13.30 2.88e-10 - yes
B 5 GO:0006796 phosphate metabolic process 26/200 3.92 7.01e-10 - no
B 4 GO:0006793 phosphorus metabolic process 26/200 3.91 7.15e-10 - no
B 5 GO:0006464 protein modification process 33/200 3.17 1.08e-09 - no
B 4 GO:0009620 response to fungus 10/200 10.08 5.55e-09 8.87E-14 yes
B 4 GO:0007165 signal transduction 16/200 5.57 5.91e-09 6.36E-16 no
B 4 GO:0009617 response to bacterium 12/200 7.76 6.36e-09 - yes
B 4 GO:0043412 macromolecule modification 33/200 2.91 9.34e-09 - no
B 3 GO:0023046 signaling process 16/200 4.94 3.42e-08 5.04E-17 no
B 3 GO:0023060 signal transmission 16/200 4.94 3.42e-08 - no
B 3 GO:0050789 regulation of biological process 41/200 2.37 5.78e-08 - yes
B 3 GO:0023033 signaling pathway 14/200 4.14 1.81e-06 - no
B 3 GO:0050794 regulation of cellular process 33/200 2.16 8.58e-06 - no
B 3 GO:0051716 cellular response to stimulus 15/200 3.39 1.08e-05 - yes
B 4 GO:0033554 cellular response to stress 10/200 4.63 1.26e-05 - yes
B 3 GO:0042221 response to chemical stimulus 26/200 2.28 2.90e-05 - yes
B 5 GO:0044267 cellular protein metabolic process 37/200 1.81 1.23e-04 - no
B 4 GO:0010033 response to organic substance 16/200 2.39 4.30e-04 - no
B 4 GO:0048513 organ development 12/200 2.71 5.55e-04 - no
B 3 GO:0044237 cellular metabolic process 67/200 1.42 5.56e-04 - yes
B 4 GO:0048731 system development 12/200 2.71 5.62e-04 - no
B 3 GO:0048856 anatomical structure development 19/200 2.12 6.93e-04 - no
B 4 GO:0019538 protein metabolic process 38/200 1.65 7.14e-04 - no
B 4 GO:0044260 cellular macromolecule metabolic process 51/200 1.45 1.90e-03 - no
B 3 GO:0009719 response to endogenous stimulus 12/200 2.33 2.17e-03 - no
B 3 GO:0007275 multicellular organismal development 20/200 1.88 2.32e-03 - no
B 3 GO:0006810 transport 19/200 1.85 3.41e-03 8.46E-16 yes
B 3 GO:0044238 primary metabolic process 66/200 1.33 3.41e-03 - yes
B 3 GO:0051234 establishment of localization 19/200 1.85 3.52e-03 - yes
B 3 GO:0009791 post-embryonic development 12/200 2.03 6.85e-03 - no
B 3 GO:0043170 macromolecule metabolic process 52/200 1.34 8.23e-03 - no
B 4 GO:0009725 response to hormone stimulus 10/200 2.12 8.35e-03 - no
C 3 GO:0016020 membrane 64/200 2.34 7.61e-12 3.64E-21 yes
C 4 GO:0005886 plasma membrane 37/200 2.99 5.63e-10 3.64E-21 yes
C 3 GO:0044464 cell part 131/200 1.43 5.76e-09 - yes
C 4 GO:0031224 intrinsic to membrane 15/200 2.80 1.08e-04 - no
C 3 GO:0044425 membrane part 17/200 2.15 1.05e-03 - no
M 5 GO:0016301 kinase activity 34/200 4.23 2.17e-13 - no
M 5 GO:0004888 transmembrane receptor activity 13/200 13.51 1.09e-12 - no
M 4 GO:0004872 receptor activity 14/200 11.94 1.10e-12 - no
M 4 GO:0016772 transferase activity, transferring phosphorus-containing groups 35/200 3.82 1.88e-12 - no
M 3 GO:0005515 protein binding 46/200 2.94 6.42e-12 0 no
M 3 GO:0004871 signal transducer activity 15/200 6.67 1.23e-09 - no
M 5 GO:0030554 adenyl nucleotide binding 30/200 3.32 2.11e-09 - no
M 4 GO:0001883 purine nucleoside binding 30/200 3.32 2.11e-09 - no
M 3 GO:0001882 nucleoside binding 30/200 3.31 2.24e-09 - no
M 3 GO:0000166 nucleotide binding 37/200 2.80 3.30e-09 - no
M 5 GO:0032555 purine ribonucleotide binding 30/200 3.06 1.41e-08 - no
M 4 GO:0032553 ribonucleotide binding 30/200 3.06 1.41e-08 - no
M 4 GO:0017076 purine nucleotide binding 31/200 2.99 1.41e-08 - no
M 3 GO:0016740 transferase activity 40/200 2.45 3.55e-08 - no
M 5 GO:0016773 phosphotransferase activity, alcohol group as acceptor 19/200 3.06 4.75e-06 - no
M 5 GO:0015075 ion transmembrane transporter activity 12/200 3.83 1.83e-05 - yes
M 3 GO:0022857 transmembrane transporter activity 16/200 2.85 5.50e-05 - yes
M 4 GO:0022891 substrate-specific transmembrane transporter activity 13/200 2.95 1.55e-04 - yes
M 4 GO:0022804 active transmembrane transporter activity 11/200 3.24 1.72e-04 - yes
M 5 GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 12/200 2.70 5.83e-04 - yes
M 4 GO:0016817 hydrolase activity, acting on acid anhydrides 12/200 2.67 6.36e-04 - yes
M 3 GO:0022892 substrate-specific transporter activity 13/200 2.52 7.51e-04 - yes
PS 4 PO:0020030 cotyledon 155/200 2.11 7.06e-33 4.99E-18 yes
PS 4 PO:0009047 stem 164/200 1.94 7.34e-32 - yes
PS 4 PO:0000230 inflorescence meristem 157/200 2.02 3.38e-31 - yes
PS 3 PO:0009013 meristem 158/200 1.97 4.97e-30 - yes
PS 5 PO:0000013 cauline leaf 154/200 1.99 3.02e-29 - yes
PS 4 PO:0009025 leaf 167/200 1.82 5.66e-29 - yes
PS 5 PO:0020039 leaf lamina 157/200 1.90 8.00e-28 - yes
PS 5 PO:0008037 seedling 162/200 1.84 1.38e-27 1.16E-17 yes
PS 5 PO:0020038 petiole 148/200 1.94 9.12e-26 - yes
PS 5 PO:0008034 leaf whorl 163/200 1.73 1.82e-24 - yes
PS 4 PO:0008033 phyllome whorl 163/200 1.73 1.82e-24 - yes
PS 5 PO:0009028 microsporophyll 151/200 1.80 9.23e-23 - yes
PS 3 PO:0006001 phyllome 167/200 1.63 2.16e-22 - yes
PS 4 PO:0009009 embryo 162/200 1.68 2.20e-22 - yes
PS 4 PO:0009026 sporophyll 156/200 1.73 2.72e-22 - yes
PS 3 PO:0009010 seed 162/200 1.66 1.10e-21 - yes
PS 4 PO:0009001 fruit 162/200 1.65 2.14e-21 - yes
PS 3 PO:0006342 infructescence 162/200 1.65 2.14e-21 - yes
PS 4 PO:0009049 inflorescence 167/200 1.60 3.38e-21 - yes
PS 5 PO:0009046 flower 166/200 1.60 7.21e-21 - yes
PS 3 PO:0009006 shoot 169/200 1.56 2.07e-20 4.94E-19 yes
PS 4 PO:0000037 shoot apex 144/200 1.67 2.46e-17 - yes
PS 3 PO:0009031 sepal 146/200 1.58 3.39e-15 - yes
PS 3 PO:0009005 root 141/200 1.57 7.78e-14 1.45E-16 yes
PS 3 PO:0009032 petal 137/200 1.56 5.06e-13 - yes
PS 5 PO:0009027 megasporophyll 124/200 1.48 3.73e-09 - yes
PS 3 PO:0020091 male gametophyte 115/200 1.39 1.70e-06 - yes
PS 5 PO:0009052 pedicel 113/200 1.39 2.14e-06 - yes
PS 4 PO:0005679 epidermis 22/200 1.78 3.17e-03 7.47E-17 yes
PS 3 PO:0009014 dermal tissue 22/200 1.78 3.19e-03 - yes
PS 5 PO:0006016 leaf epidermis 19/200 1.71 8.22e-03 - yes
PS 3 PO:0004013 epidermal cell 20/200 1.68 8.57e-03 1.60E-16 yes
PS 5 PO:0006035 shoot epidermis 19/200 1.70 8.84e-03 - yes
PG 5 PO:0007133 leaf production 161/200 1.91 1.17e-29 - yes
PG 4 PO:0007112 1 main shoot growth 161/200 1.91 1.21e-29 - yes
PG 3 PO:0007134 A vegetative growth 161/200 1.90 3.05e-29 - yes
PG 4 PO:0001054 4 leaf senescence stage 149/200 1.94 6.47e-26 - yes
PG 3 PO:0001050 leaf development stages 149/200 1.94 6.91e-26 - yes
PG 4 PO:0007616 4 anthesis 160/200 1.65 7.29e-21 - yes
PG 3 PO:0007615 flower development stages 165/200 1.58 7.99e-20 - yes
PG 5 PO:0007604 corolla developmental stages 158/200 1.60 1.17e-18 - yes
PG 4 PO:0007600 3 floral organ development stages 159/200 1.56 1.31e-17 - yes
PG 4 PO:0007631 embryo development stages 139/200 1.54 7.30e-13 - yes
PG 3 PO:0001170 seed development stages 139/200 1.54 1.09e-12 - yes
PG 5 PO:0001078 E expanded cotyledon stage 126/200 1.52 2.71e-10 - yes
PG 5 PO:0004507 D bilateral stage 124/200 1.51 9.21e-10 - yes
PG 5 PO:0001081 F mature embryo stage 121/200 1.52 1.01e-09 - yes
PG 5 PO:0001185 C globular stage 121/200 1.47 9.10e-09 - yes
KW 0 leucine - 40/200 7.62 9.41e-25 - no
KW 0 ipr001611 - 31/200 10.97 3.02e-24 - no
KW 0 ipr002182 - 21/200 22.10 9.42e-24 - no
KW 0 defense - 33/200 9.46 1.27e-23 1.26E-16 no
KW 0 resistance - 29/200 10.19 6.92e-22 1.11E-15 yes
KW 0 disease - 22/200 12.57 4.22e-19 5.48E-15 no
KW 0 response - 55/200 3.07 6.05e-15 3.49E-15 no
KW 0 receptor - 28/200 5.89 7.66e-15 8.87E-14 no
KW 0 transmembrane - 34/200 4.68 1.08e-14 0 yes
KW 0 repeat - 44/200 3.39 1.53e-13 - no
KW 0 ipr000157 - 13/200 15.55 1.55e-13 - no
KW 0 interleukin - 13/200 15.55 1.55e-13 - no
KW 0 ipr017441 - 24/200 5.59 1.74e-12 - no
KW 0 membrane - 64/200 2.40 2.12e-12 3.64E-21 yes
KW 0 ipr017442 - 26/200 4.94 4.03e-12 - no
KW 0 phosphorylation - 28/200 4.56 4.49e-12 - no
KW 0 ipr000719 - 28/200 4.49 6.24e-12 - no
KW 0 apoptosis - 12/200 13.39 7.43e-12 - no
KW 0 ipr011009 - 28/200 4.33 1.51e-11 - no
KW 0 plasma - 38/200 3.32 1.52e-11 3.64E-21 yes
KW 0 kinase - 35/200 3.32 9.85e-11 - no
KW 0 amino - 31/200 3.60 1.51e-10 1.80E-15 no
KW 0 ipr008271 - 23/200 4.71 1.62e-10 - no
KW 0 ipr013210 - 12/200 9.11 9.17e-10 - no
KW 0 intrinsic - 11/200 9.89 1.51e-09 - no
KW 0 class - 24/200 4.01 1.88e-09 - no
KW 0 threonine - 27/200 3.60 2.18e-09 - no
KW 0 putative - 50/200 2.17 3.30e-08 0 no
KW 0 transduction - 16/200 4.84 4.57e-08 6.98E-16 no
KW 0 active - 26/200 3.18 5.63e-08 1.35E-15 no
KW 0 serine - 27/200 3.03 8.58e-08 - no
KW 0 signal - 18/200 4.10 1.07e-07 1.02E-15 no
KW 0 ipr002290 - 14/200 4.75 3.29e-07 - no
KW 0 ipr001245 - 13/200 5.10 3.33e-07 - no
KW 0 tyrosine - 15/200 4.23 6.60e-07 - no
KW 0 atpase - 14/200 3.97 3.02e-06 0 yes
KW 0 ipr003593 - 10/200 4.99 6.22e-06 - yes
KW 0 pathway - 11/200 4.09 1.89e-05 8.34E-16 no
KW 0 related - 49/200 1.74 2.66e-05 0 no
KW 0 signaling - 12/200 3.22 1.05e-04 7.06E-16 no
KW 0 terminal - 35/200 1.82 1.83e-04 - no
KW 0 nucleotide - 16/200 2.51 2.43e-04 - no
KW 0 processes - 10/200 3.30 2.59e-04 - yes
KW 0 stimulus - 10/200 2.32 4.26e-03 - no
KW 0 transporter - 14/200 2.01 4.46e-03 0 yes
KW 0 complex - 16/200 1.89 5.17e-03 8.87E-14 no
KW 0 region - 24/200 1.66 5.24e-03 3.00E-06 no
(*1) [B]:Biological process(Gene ontology), [C]:Cellular component(Gene ontology), [M]:Molecular function(Gene ontology), [PS]:Plant Structure(Plant ontology), [PG]:Growth and developmental stages(Plant ontology), [KW]:words found in gene description.
(*2) ([# of genes with the term] / [# of sampling (200)]) / ([# of genes with the term among whole genes] / [# of whole genes])
(*3) P-values were calculated on hypergeometric distribution in which we found n genes with a annotation term during 200 highly correlated genes, while we had N genes with the term in the whole genes.
(*4) PosMed is a system which serve a p-values showing a relationship between the gene and the annotation term based on literature information and Gene-Gene interaction suchas co-expression or protein-protein interactions.

Top Page