OMAT1P016370 (↑ Click "Links", if this line appears at the beginning.)

Other supporting information

Gene Model

Correlation Plot


Expression profile (Values are plotted in Log(2) values.)

Genes with related expresssion profiles.
Positively Correlated Genes
GensPCC Definition Overlap geneDefinition Overlap gene(antisense)Definition
OMAT3P011110 0.952273 - AT3G30210 MYB121 (MYB DOMAIN PROTEIN 121) - -
OMAT3P109320 0.95028 - AT3G28740 CYP81D1 - -
OMAT2P108460 0.946472 - AT2G36800 DOGT1 (DON-GLUCOSYLTRANSFERASE 1) - -
OMAT5P104890 0.939734 - AT5G16980 NADP-dependent oxidoreductase, putative - -
OMAT5P009480 0.939081 - - - AT5G28510 BGLU24 (BETA GLUCOSIDASE 24)
OMAT3P010740 0.938082 - - - AT3G28740 CYP81D1
OMAT3P015320 0.936239 - - - AT3G55500 ATEXPA16 (ARABIDOPSIS THALIANA EXPANSIN A16)
OMAT5P108350 0.936115 - AT5G28510 BGLU24 (BETA GLUCOSIDASE 24) - -
OMAT1P102670 0.934664 - AT1G08630 THA1 (Threonine Aldolase 1) - -
OMAT1P113900 0.933348 - - - AT1G55920 ATSERAT2
Negatively Correlated Genes
GensPCC Definition Overlap geneDefinition Overlap gene(antisense)Definition
OMAT5P111220 -0.585302 - AT5G45320,AT5G45330 [AT5G45320]FUNCTIONS IN: molecular_function unknown, [AT5G45330]unknown protein - -
OMAT1P120640 -0.553211 - AT1G78580 ATTPS1 (TREHALOSE-6-PHOSPHATE SYNTHASE) - -
OMAT1P004060 -0.550503 - AT1G11840 ATGLX1 (GLYOXALASE I HOMOLOG) - -
OMAT2P110230 -0.530319 - AT2G40950 BZIP17 - -
OMAT2P004680 -0.523136 - AT2G23340 AP2 domain-containing transcription factor, putative - -
OMAT1P005660 -0.522857 - AT1G15710 prephenate dehydrogenase family protein - -
OMAT1P007630 -0.522311 - AT1G20823 zinc finger (C3HC4-type RING finger) family protein - -
OMAT5P001210 -0.518341 - AT5G04060 dehydration-responsive protein-related - -
OMAT4P005220 -0.505559 - AT4G17615 CBL1 (CALCINEURIN B-LIKE PROTEIN 1) - -
OMAT5P004120 -0.504103 - AT5G12040 carbon-nitrogen hydrolase family protein - -

Get whole results

Over-Representation Analysis Result

p-value <= 1.60e-14:20 terms with high significance
1.60e-14 < p-value <= 8.76e-06 :With considering multiple testing correction;
p <= 1.00e-02 / 1142
8.76e-06 < p-value <= 1.00e-02

Type of term (*1) Depth of the term in ontology tree ID/Term Description Number of genes Over-Representative rate (*2) p-value (*3) PosMed p-value (*4)
(Link to PosMed)		 Found on gene annotation
B 3 GO:0042221 response to chemical stimulus 32/200 2.81 3.68e-08 - yes
B 4 GO:0010033 response to organic substance 21/200 3.14 1.10e-06 - no
B 3 GO:0009056 catabolic process 17/200 3.56 1.67e-06 - no
B 4 GO:0044248 cellular catabolic process 14/200 3.88 4.01e-06 - no
B 3 GO:0044281 small molecule metabolic process 23/200 2.56 1.23e-05 - no
B 5 GO:0043436 oxoacid metabolic process 13/200 2.95 1.52e-04 - no
B 4 GO:0006082 organic acid metabolic process 13/200 2.94 1.57e-04 - no
B 4 GO:0042180 cellular ketone metabolic process 13/200 2.90 1.85e-04 - no
B 3 GO:0009719 response to endogenous stimulus 13/200 2.52 7.34e-04 - no
B 4 GO:0009725 response to hormone stimulus 12/200 2.54 1.01e-03 - no
B 3 GO:0065008 regulation of biological quality 10/200 2.68 1.43e-03 - no
B 4 GO:0006629 lipid metabolic process 11/200 2.53 1.53e-03 - no
B 3 GO:0006950 response to stress 22/200 1.77 3.23e-03 - no
B 4 GO:0005975 carbohydrate metabolic process 11/200 2.11 6.45e-03 - no
C 3 GO:0044464 cell part 116/200 1.27 1.90e-04 - yes
C 3 GO:0012505 endomembrane system 39/200 1.61 9.98e-04 - no
M 3 GO:0016491 oxidoreductase activity 23/200 2.73 4.29e-06 - yes
M 4 GO:0016757 transferase activity, transferring glycosyl groups 10/200 3.43 1.86e-04 - no
M 4 GO:0043169 cation binding 26/200 1.81 1.17e-03 - no
M 3 GO:0043167 ion binding 26/200 1.81 1.17e-03 - no
M 3 GO:0016740 transferase activity 28/200 1.71 1.84e-03 - no
M 5 GO:0046872 metal ion binding 24/200 1.77 2.35e-03 - no
M 3 GO:0016787 hydrolase activity 26/200 1.66 3.78e-03 - no
PS 4 PO:0009047 stem 146/200 1.73 2.18e-19 - yes
PS 5 PO:0009028 microsporophyll 145/200 1.73 4.31e-19 - yes
PS 5 PO:0008037 seedling 146/200 1.65 2.91e-17 - yes
PS 4 PO:0020030 cotyledon 131/200 1.78 3.56e-17 - yes
PS 3 PO:0009005 root 147/200 1.63 6.45e-17 - yes
PS 4 PO:0009026 sporophyll 147/200 1.63 6.59e-17 - yes
PS 3 PO:0020091 male gametophyte 138/200 1.66 9.00e-16 - yes
PS 4 PO:0009025 leaf 146/200 1.59 2.13e-15 - yes
PS 4 PO:0009009 embryo 150/200 1.55 3.19e-15 - yes
PS 3 PO:0009031 sepal 146/200 1.58 3.39e-15 - yes
PS 3 PO:0009032 petal 141/200 1.61 5.99e-15 - yes
PS 5 PO:0000013 cauline leaf 130/200 1.68 1.19e-14 - yes
PS 3 PO:0009010 seed 150/200 1.53 1.19e-14 - yes
PS 5 PO:0020039 leaf lamina 135/200 1.64 1.60e-14 - yes
PS 3 PO:0006001 phyllome 154/200 1.50 1.62e-14 - yes
PS 4 PO:0009001 fruit 150/200 1.53 2.07e-14 - yes
PS 3 PO:0006342 infructescence 150/200 1.53 2.07e-14 - yes
PS 3 PO:0009006 shoot 159/200 1.46 2.22e-14 - yes
PS 5 PO:0009027 megasporophyll 136/200 1.62 2.88e-14 - yes
PS 5 PO:0008034 leaf whorl 145/200 1.54 8.70e-14 - yes
PS 4 PO:0008033 phyllome whorl 145/200 1.54 8.70e-14 - yes
PS 5 PO:0009046 flower 153/200 1.47 2.44e-13 - yes
PS 4 PO:0009049 inflorescence 153/200 1.46 4.59e-13 - yes
PS 4 PO:0000230 inflorescence meristem 126/200 1.62 1.41e-12 - yes
PS 5 PO:0020038 petiole 124/200 1.63 2.05e-12 - yes
PS 3 PO:0009013 meristem 127/200 1.58 8.01e-12 - yes
PS 4 PO:0000037 shoot apex 127/200 1.48 1.72e-09 - yes
PS 4 PO:0006345 pollen tube 53/200 1.82 3.35e-06 - no
PS 5 PO:0009052 pedicel 112/200 1.38 4.20e-06 - yes
PG 3 PO:0007134 A vegetative growth 142/200 1.68 5.97e-17 - yes
PG 5 PO:0007133 leaf production 141/200 1.68 1.00e-16 - yes
PG 4 PO:0007112 1 main shoot growth 141/200 1.68 1.02e-16 - yes
PG 4 PO:0007616 4 anthesis 151/200 1.56 1.40e-15 - yes
PG 4 PO:0001054 4 leaf senescence stage 130/200 1.69 8.07e-15 - yes
PG 3 PO:0001050 leaf development stages 130/200 1.69 8.47e-15 - yes
PG 3 PO:0007615 flower development stages 155/200 1.48 4.95e-14 - yes
PG 5 PO:0007604 corolla developmental stages 148/200 1.50 3.00e-13 - yes
PG 4 PO:0007600 3 floral organ development stages 150/200 1.47 8.02e-13 - yes
PG 4 PO:0007631 embryo development stages 134/200 1.49 1.10e-10 - yes
PG 3 PO:0001170 seed development stages 134/200 1.48 1.57e-10 - yes
PG 5 PO:0001185 C globular stage 124/200 1.51 6.90e-10 - yes
PG 5 PO:0001078 E expanded cotyledon stage 119/200 1.43 9.74e-08 - yes
PG 5 PO:0004507 D bilateral stage 118/200 1.43 1.28e-07 - yes
PG 5 PO:0001081 F mature embryo stage 115/200 1.45 1.37e-07 - yes
PG 5 PO:0007605 androecium developmental stages 48/200 1.64 1.56e-04 - yes
KW 0 response - 44/200 2.45 6.28e-09 - yes
KW 0 process - 46/200 2.25 4.30e-08 - yes
KW 0 encodes - 51/200 2.00 3.16e-07 - yes
KW 0 metabolic - 27/200 2.35 1.20e-05 - yes
KW 0 induced - 11/200 4.02 2.25e-05 - no
KW 0 dehydrogenase - 11/200 3.79 3.93e-05 0 yes
KW 0 glycosyl - 13/200 3.05 1.09e-04 - no
KW 0 stimulus - 13/200 3.02 1.21e-04 - no
KW 0 transferase - 16/200 2.61 1.59e-04 - no
KW 0 mediated - 11/200 3.11 2.52e-04 - no
KW 0 phosphate - 10/200 3.30 2.59e-04 - no
KW 0 stress - 13/200 2.77 2.91e-04 - no
KW 0 system - 40/200 1.65 4.92e-04 - no
KW 0 endomembrane - 39/200 1.65 5.86e-04 - no
KW 0 class - 14/200 2.34 1.08e-03 - no
KW 0 terminal - 32/200 1.66 1.57e-03 - no
KW 0 region - 25/200 1.73 2.63e-03 - no
KW 0 oxidoreductase - 11/200 2.36 2.70e-03 - yes
KW 0 hydrolase - 15/200 2.06 2.86e-03 - no
KW 0 catalytic - 19/200 1.87 3.10e-03 - no
(*1) [B]:Biological process(Gene ontology), [C]:Cellular component(Gene ontology), [M]:Molecular function(Gene ontology), [PS]:Plant Structure(Plant ontology), [PG]:Growth and developmental stages(Plant ontology), [KW]:words found in gene description.
(*2) ([# of genes with the term] / [# of sampling (200)]) / ([# of genes with the term among whole genes] / [# of whole genes])
(*3) P-values were calculated on hypergeometric distribution in which we found n genes with a annotation term during 200 highly correlated genes, while we had N genes with the term in the whole genes.
(*4) PosMed is a system which serve a p-values showing a relationship between the gene and the annotation term based on literature information and Gene-Gene interaction suchas co-expression or protein-protein interactions.
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