OMAT1P016410 (↑ Click "Links", if this line appears at the beginning.)

Other supporting information

Gene Model

Correlation Plot


Expression profile (Values are plotted in Log(2) values.)

Genes with related expresssion profiles.
Positively Correlated Genes
GensPCC Definition Overlap geneDefinition Overlap gene(antisense)Definition
OMAT1P103150 0.922929 - - - AT1G09970 LRR XI-23
OMAT1P104980 0.920728 - - - AT1G15010 unknown protein
OMAT1P102780 0.915136 - - - AT1G09070 SRC2 (SOYBEAN GENE REGULATED BY COLD-2)
OMAT1P121330 0.911995 - - - AT1G80380 phosphoribulokinase/uridine kinase-related
OMAT1P000190 0.906946 - - - AT1G01470 LEA14 (LATE EMBRYOGENESIS ABUNDANT 14)
OMAT3P102680 0.906882 - - - AT3G07790 DGCR14-related
OMAT5P105980 0.906351 - - - AT5G20250 DIN10 (DARK INDUCIBLE 10)
OMAT5P113520 0.905468 - - - AT5G52310 LTI78 (LOW-TEMPERATURE-INDUCED 78)
OMAT3P008720 0.904482 - - - AT3G23030 IAA2 (INDOLE-3-ACETIC ACID INDUCIBLE 2)
OMAT1P115310 0.902167 - - - AT1G62570 FMO GS-OX4 (FLAVIN-MONOOXYGENASE GLUCOSINOLATE S-OXYGENASE 4)
Negatively Correlated Genes
GensPCC Definition Overlap geneDefinition Overlap gene(antisense)Definition
OMAT5P019460 -0.815845 - AT5G63550 EXPRESSED IN: guard cell - -
OMAT3P017540 -0.806157 - AT3G61670 unknown protein - -
OMAT1P014530 -0.804095 - AT1G52730 transducin family protein / WD-40 repeat family protein - -
OMAT1P022630 -0.797979 - AT1G76880 trihelix DNA-binding protein, putative AT1G76878 other RNA
OMAT5P104920 -0.788436 - AT5G17010 sugar transporter family protein - -
OMAT1P014380 -0.779635 - AT1G52310 protein kinase family protein / C-type lectin domain-containing protein - -
OMAT1P002090 -0.779511 - AT1G06500 unknown protein - -
OMAT5P014340 -0.778267 - AT5G50020 zinc finger (DHHC type) family protein - -
OMAT5P014020 -0.772561 - AT5G49060 DNAJ heat shock N-terminal domain-containing protein - -
OMAT1P018130 -0.772503 - AT1G65380 CLV2 (clavata 2) - -

Get whole results

Over-Representation Analysis Result

p-value <= 5.65e-17:20 terms with high significance
5.65e-17 < p-value <= 8.76e-06 :With considering multiple testing correction;
p <= 1.00e-02 / 1142
8.76e-06 < p-value <= 1.00e-02

Type of term (*1) Depth of the term in ontology tree ID/Term Description Number of genes Over-Representative rate (*2) p-value (*3) PosMed p-value (*4)
(Link to PosMed)		 Found on gene annotation
B 3 GO:0006950 response to stress 49/200 3.95 1.11e-17 - no
B 3 GO:0042221 response to chemical stimulus 46/200 4.03 5.65e-17 - no
B 4 GO:0010033 response to organic substance 30/200 4.49 1.19e-12 - no
B 4 GO:0009414 response to water deprivation 13/200 11.32 1.22e-11 - no
B 5 GO:0009737 response to abscisic acid stimulus 15/200 8.88 1.86e-11 - no
B 4 GO:0009415 response to water 13/200 10.81 2.27e-11 - no
B 3 GO:0009719 response to endogenous stimulus 23/200 4.46 4.76e-10 - no
B 4 GO:0009409 response to cold 13/200 8.35 6.93e-10 - no
B 3 GO:0009628 response to abiotic stimulus 26/200 3.51 7.25e-09 - no
B 4 GO:0009266 response to temperature stimulus 14/200 6.14 1.17e-08 - no
B 4 GO:0009725 response to hormone stimulus 20/200 4.23 1.41e-08 - no
B 5 GO:0009743 response to carbohydrate stimulus 10/200 7.96 6.39e-08 - no
B 4 GO:0006952 defense response 17/200 3.73 8.65e-07 - no
B 4 GO:0006979 response to oxidative stress 10/200 6.11 8.89e-07 - no
B 3 GO:0006955 immune response 10/200 5.28 3.67e-06 - no
B 3 GO:0009607 response to biotic stimulus 14/200 3.87 4.09e-06 - no
B 3 GO:0051707 response to other organism 13/200 3.88 7.98e-06 - no
B 4 GO:0006970 response to osmotic stress 11/200 4.39 9.49e-06 - no
B 3 GO:0050794 regulation of cellular process 31/200 2.03 5.34e-05 - no
B 3 GO:0050789 regulation of biological process 33/200 1.91 1.09e-04 - no
B 4 GO:0007165 signal transduction 10/200 3.48 1.64e-04 - no
B 5 GO:0051252 regulation of RNA metabolic process 14/200 2.68 2.68e-04 - no
B 5 GO:0032774 RNA biosynthetic process 14/200 2.56 4.39e-04 - no
B 3 GO:0023046 signaling process 10/200 3.08 4.55e-04 - no
B 3 GO:0023060 signal transmission 10/200 3.08 4.55e-04 - no
B 3 GO:0044237 cellular metabolic process 65/200 1.38 1.59e-03 - no
B 3 GO:0009058 biosynthetic process 44/200 1.51 1.69e-03 - no
B 5 GO:0006464 protein modification process 20/200 1.92 1.83e-03 - no
B 5 GO:0019219 regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 19/200 1.90 2.66e-03 - no
B 4 GO:0044249 cellular biosynthetic process 42/200 1.49 2.71e-03 - no
B 4 GO:0031323 regulation of cellular metabolic process 20/200 1.85 2.86e-03 - no
B 4 GO:0051171 regulation of nitrogen compound metabolic process 19/200 1.88 2.98e-03 - no
B 4 GO:0080090 regulation of primary metabolic process 19/200 1.80 4.60e-03 - no
B 5 GO:0010556 regulation of macromolecule biosynthetic process 18/200 1.83 4.86e-03 - no
B 4 GO:0043412 macromolecule modification 20/200 1.76 4.95e-03 - no
B 4 GO:0009889 regulation of biosynthetic process 18/200 1.79 5.94e-03 - no
B 5 GO:0031326 regulation of cellular biosynthetic process 18/200 1.79 5.94e-03 - no
B 5 GO:0006350 transcription 18/200 1.76 7.01e-03 - no
B 3 GO:0019222 regulation of metabolic process 20/200 1.70 7.47e-03 - no
B 3 GO:0044238 primary metabolic process 64/200 1.29 8.30e-03 - no
C 3 GO:0016020 membrane 47/200 1.72 6.00e-05 - no
C 5 GO:0005634 nucleus 30/200 1.92 1.95e-04 - no
C 3 GO:0044424 intracellular part 72/200 1.41 3.55e-04 - no
C 4 GO:0043231 intracellular membrane-bounded organelle 63/200 1.43 6.41e-04 - no
C 3 GO:0043227 membrane-bounded organelle 63/200 1.43 6.43e-04 - no
C 3 GO:0005622 intracellular 73/200 1.37 7.97e-04 - no
C 3 GO:0044464 cell part 111/200 1.21 2.24e-03 - no
C 3 GO:0043229 intracellular organelle 63/200 1.36 2.39e-03 - no
M 3 GO:0003700 transcription factor activity 23/200 2.28 7.88e-05 - no
M 4 GO:0003677 DNA binding 24/200 1.73 3.06e-03 - no
M 3 GO:0016740 transferase activity 27/200 1.65 3.63e-03 - no
M 5 GO:0016773 phosphotransferase activity, alcohol group as acceptor 12/200 1.93 9.97e-03 - no
PS 4 PO:0020030 cotyledon 140/200 1.91 2.40e-22 - no
PS 4 PO:0009025 leaf 157/200 1.71 8.52e-22 - no
PS 3 PO:0006001 phyllome 165/200 1.61 5.05e-21 - no
PS 5 PO:0020039 leaf lamina 146/200 1.77 1.68e-20 - no
PS 5 PO:0009028 microsporophyll 147/200 1.75 2.86e-20 - no
PS 5 PO:0008037 seedling 150/200 1.70 1.49e-19 - no
PS 5 PO:0020038 petiole 137/200 1.80 6.28e-19 - no
PS 4 PO:0009047 stem 145/200 1.72 8.26e-19 - no
PS 3 PO:0009005 root 150/200 1.67 1.32e-18 - no
PS 4 PO:0009026 sporophyll 150/200 1.67 1.35e-18 - no
PS 3 PO:0009006 shoot 166/200 1.53 1.92e-18 - no
PS 5 PO:0008034 leaf whorl 153/200 1.62 4.84e-18 - no
PS 4 PO:0008033 phyllome whorl 153/200 1.62 4.84e-18 - no
PS 4 PO:0009001 fruit 154/200 1.57 1.54e-16 - no
PS 3 PO:0006342 infructescence 154/200 1.57 1.54e-16 - no
PS 4 PO:0009009 embryo 152/200 1.57 2.72e-16 - no
PS 3 PO:0009031 sepal 148/200 1.60 3.01e-16 - no
PS 5 PO:0009046 flower 158/200 1.52 5.75e-16 - no
PS 3 PO:0020091 male gametophyte 138/200 1.66 9.00e-16 - no
PS 3 PO:0009010 seed 152/200 1.55 1.07e-15 - no
PS 4 PO:0009049 inflorescence 158/200 1.51 1.15e-15 - no
PS 5 PO:0009027 megasporophyll 138/200 1.64 2.97e-15 - no
PS 3 PO:0009032 petal 141/200 1.61 5.99e-15 - no
PS 4 PO:0000037 shoot apex 139/200 1.62 9.95e-15 - no
PS 4 PO:0000230 inflorescence meristem 129/200 1.66 5.94e-14 - no
PS 3 PO:0009013 meristem 130/200 1.62 3.74e-13 - no
PS 5 PO:0000013 cauline leaf 125/200 1.62 2.44e-12 - no
PS 4 PO:0006345 pollen tube 58/200 1.99 4.42e-08 - no
PS 5 PO:0009052 pedicel 118/200 1.45 5.51e-08 - no
PS 3 PO:0000084 sperm cell 47/200 1.45 2.84e-03 - no
PS 3 PO:0020097 generative cell 47/200 1.45 2.84e-03 - no
PG 5 PO:0007133 leaf production 147/200 1.75 4.07e-20 - no
PG 4 PO:0007112 1 main shoot growth 147/200 1.75 4.17e-20 - no
PG 3 PO:0007134 A vegetative growth 147/200 1.74 8.92e-20 - no
PG 4 PO:0007616 4 anthesis 154/200 1.59 3.14e-17 - no
PG 3 PO:0007615 flower development stages 159/200 1.52 3.47e-16 - no
PG 4 PO:0007600 3 floral organ development stages 155/200 1.52 2.33e-15 - no
PG 4 PO:0001054 4 leaf senescence stage 131/200 1.70 2.59e-15 - no
PG 3 PO:0001050 leaf development stages 131/200 1.70 2.72e-15 - no
PG 5 PO:0007604 corolla developmental stages 150/200 1.52 3.09e-14 - no
PG 4 PO:0007631 embryo development stages 130/200 1.44 4.04e-09 - no
PG 3 PO:0001170 seed development stages 130/200 1.44 5.62e-09 - no
PG 5 PO:0001185 C globular stage 121/200 1.47 9.10e-09 - no
PG 5 PO:0004507 D bilateral stage 120/200 1.46 2.68e-08 - no
PG 5 PO:0001078 E expanded cotyledon stage 116/200 1.40 8.92e-07 - no
PG 5 PO:0001081 F mature embryo stage 112/200 1.41 1.22e-06 - no
PG 5 PO:0007605 androecium developmental stages 48/200 1.64 1.56e-04 - no
KW 0 response - 62/200 3.46 1.85e-19 - no
KW 0 stress - 30/200 6.40 8.94e-17 - no
KW 0 induced - 18/200 6.58 4.89e-11 - no
KW 0 oxidative - 10/200 7.11 2.00e-07 - no
KW 0 encodes - 49/200 1.92 1.84e-06 - no
KW 0 responsive - 12/200 4.01 1.14e-05 - no
KW 0 processes - 12/200 3.96 1.29e-05 - no
KW 0 membrane - 48/200 1.80 1.35e-05 - no
KW 0 cytoplasm - 12/200 3.87 1.62e-05 - no
KW 0 superfamily - 13/200 3.43 3.11e-05 - no
KW 0 nucleus - 28/200 2.17 3.68e-05 - no
KW 0 regulator - 11/200 3.76 4.26e-05 - no
KW 0 subfamily - 11/200 3.41 1.08e-04 - no
KW 0 stimulus - 13/200 3.02 1.21e-04 - no
KW 0 transcription - 29/200 2.00 1.23e-04 - no
KW 0 expression - 13/200 2.69 3.93e-04 - no
KW 0 signal - 12/200 2.73 5.14e-04 - no
KW 0 transduction - 10/200 3.02 5.38e-04 - no
KW 0 hydrolase - 16/200 2.19 1.12e-03 - no
KW 0 factor - 30/200 1.71 1.30e-03 - no
KW 0 process - 33/200 1.61 2.21e-03 - no
KW 0 biosynthetic - 15/200 2.10 2.33e-03 - no
KW 0 putative - 36/200 1.56 2.55e-03 - no
KW 0 class - 13/200 2.17 2.96e-03 - no
KW 0 leaves - 11/200 2.22 4.36e-03 - no
KW 0 terminal - 30/200 1.56 5.56e-03 - no
KW 0 regulation - 22/200 1.66 6.91e-03 - no
KW 0 ipr017442 - 11/200 2.09 7.04e-03 - no
KW 0 related - 40/200 1.42 7.66e-03 - no
KW 0 serine - 16/200 1.80 8.42e-03 - no
KW 0 threonine - 14/200 1.87 8.71e-03 - no
(*1) [B]:Biological process(Gene ontology), [C]:Cellular component(Gene ontology), [M]:Molecular function(Gene ontology), [PS]:Plant Structure(Plant ontology), [PG]:Growth and developmental stages(Plant ontology), [KW]:words found in gene description.
(*2) ([# of genes with the term] / [# of sampling (200)]) / ([# of genes with the term among whole genes] / [# of whole genes])
(*3) P-values were calculated on hypergeometric distribution in which we found n genes with a annotation term during 200 highly correlated genes, while we had N genes with the term in the whole genes.
(*4) PosMed is a system which serve a p-values showing a relationship between the gene and the annotation term based on literature information and Gene-Gene interaction suchas co-expression or protein-protein interactions.
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