OMAT1P106720 (↑ Click "Links", if this line appears at the beginning.)

Other supporting information

Gene Model

Correlation Plot


Expression profile (Values are plotted in Log(2) values.)

Genes with related expresssion profiles.
Positively Correlated Genes
GensPCC Definition Overlap geneDefinition Overlap gene(antisense)Definition
OMAT1P013500 0.915443 - AT1G49240 ACT8 (ACTIN 8) - -
OMAT4P108670 0.905487 - AT4G30670 unknown protein - -
OMAT5P111740 0.902983 - ath-MIR160c,AT5G46845 [ath-MIR160c]ath-MIR160c, [AT5G46845]MIR160/MIR160C (MICRORNA160) - -
OMAT4P007120 0.897761 - AT4G23470 hydroxyproline-rich glycoprotein family protein - -
OMAT4P106340 0.889277 - AT4G23700 ATCHX17 (CATION/H+ EXCHANGER 17) - -
OMAT1P021670 0.887711 - AT1G74458,ath-MIR415 [AT1G74458]unknown protein, [ath-MIR415]ath-MIR415 - -
OMAT4P011840 0.886484 - AT4G34580 COW1 (CAN OF WORMS1) - -
OMAT3P100260 0.88037 - AT3G01472,AT3G01470 [AT3G01472]CPuORF33 (Conserved peptide upstream open reading frame 33), [AT3G01470]ATHB-1 (ARABIDOPSIS THALIANA HOMEOBOX 1) - -
OMAT4P012140 0.878883 - AT4G35350 XCP1 (XYLEM CYSTEINE PEPTIDASE 1) - -
OMAT1P109240 0.878853 - AT1G29300 UNE1 (unfertilized embryo sac 1) - -
Negatively Correlated Genes
GensPCC Definition Overlap geneDefinition Overlap gene(antisense)Definition
OMAT3P013820 -0.722295 - AT3G51500,AT3G51510 [AT3G51500]unknown protein, [AT3G51510]unknown protein - -
OMAT1P000220 -0.691129 - AT1G01500 unknown protein - -
OMAT4P008470 -0.686106 - AT4G26700 ATFIM1 - -
OMAT4P102160 -0.631771 - AT4G10920 KELP - -
OMAT1P003390 -0.616744 - AT1G09795 ATATP-PRT2 (ATP PHOSPHORIBOSYL TRANSFERASE 2) - -
OMAT2P107920 -0.604368 - AT2G35345 unknown protein - -
OMAT1P117160 -0.601829 - AT1G68660 FUNCTIONS IN: molecular_function unknown - -
OMAT5P008580 -0.594845 - AT5G25130 CYP71B12 - -
OMAT4P001380 -0.592817 - AT4G04020 FIB (FIBRILLIN) - -
OMAT2P101930 -0.584965 - AT2G16070 PDV2 (PLASTID DIVISION2) - -

Get whole results

Over-Representation Analysis Result

p-value <= 1.46e-07:20 terms with high significance
1.46e-07 < p-value <= 8.76e-06 :With considering multiple testing correction;
p <= 1.00e-02 / 1142
8.76e-06 < p-value <= 1.00e-02

Type of term (*1) Depth of the term in ontology tree ID/Term Description Number of genes Over-Representative rate (*2) p-value (*3) PosMed p-value (*4)
(Link to PosMed)		 Found on gene annotation
B 3 GO:0042221 response to chemical stimulus 32/200 2.81 3.68e-08 - no
B 3 GO:0006950 response to stress 33/200 2.66 8.11e-08 2.13E-16 no
B 4 GO:0006979 response to oxidative stress 11/200 6.72 1.10e-07 - no
B 3 GO:0006810 transport 23/200 2.24 9.87e-05 8.46E-16 no
B 3 GO:0051234 establishment of localization 23/200 2.24 1.03e-04 - no
B 4 GO:0010033 response to organic substance 15/200 2.24 1.19e-03 - no
B 3 GO:0009628 response to abiotic stimulus 16/200 2.16 1.32e-03 - no
B 3 GO:0009719 response to endogenous stimulus 11/200 2.13 5.96e-03 - no
B 4 GO:0009725 response to hormone stimulus 10/200 2.12 8.35e-03 - no
B 3 GO:0044281 small molecule metabolic process 16/200 1.78 9.08e-03 - no
C 3 GO:0044464 cell part 124/200 1.36 1.32e-06 - yes
C 3 GO:0012505 endomembrane system 46/200 1.89 5.79e-06 - no
C 4 GO:0005618 cell wall 13/200 3.92 7.21e-06 1.18E-16 no
C 3 GO:0030312 external encapsulating structure 13/200 3.89 7.82e-06 - no
C 3 GO:0016020 membrane 44/200 1.61 4.68e-04 1.00E-20 yes
C 4 GO:0031224 intrinsic to membrane 11/200 2.05 8.07e-03 - no
M 4 GO:0016684 oxidoreductase activity, acting on peroxide as acceptor 11/200 17.59 1.71e-12 - no
M 3 GO:0004601 peroxidase activity 11/200 17.59 1.71e-12 - no
M 3 GO:0016491 oxidoreductase activity 29/200 3.44 1.67e-09 - no
M 4 GO:0020037 heme binding 13/200 7.43 3.11e-09 - no
M 3 GO:0046906 tetrapyrrole binding 13/200 6.82 9.25e-09 - no
M 4 GO:0043169 cation binding 32/200 2.23 6.35e-06 - no
M 3 GO:0043167 ion binding 32/200 2.23 6.35e-06 - no
M 5 GO:0046872 metal ion binding 30/200 2.21 1.41e-05 - no
M 3 GO:0016740 transferase activity 27/200 1.65 3.63e-03 - no
PS 3 PO:0009005 root 156/200 1.73 2.65e-22 - yes
PS 4 PO:0006036 root epidermis 11/200 17.59 1.71e-12 - no
PS 5 PO:0008037 seedling 115/200 1.30 5.39e-05 - yes
PS 4 PO:0009001 fruit 119/200 1.21 1.32e-03 - yes
PS 3 PO:0006342 infructescence 119/200 1.21 1.32e-03 - yes
PS 4 PO:0009009 embryo 115/200 1.19 3.68e-03 - yes
PS 3 PO:0009010 seed 116/200 1.19 4.01e-03 - yes
KW 0 peroxidase - 11/200 15.50 7.85e-12 - no
KW 0 fungal - 11/200 13.96 2.73e-11 - no
KW 0 hypocotyl - 17/200 7.29 2.92e-11 - no
KW 0 response - 47/200 2.62 1.97e-10 3.49E-15 no
KW 0 stress - 21/200 4.48 2.33e-09 7.86E-16 no
KW 0 visible - 18/200 4.86 7.38e-09 9.31E-19 no
KW 0 copper - 11/200 8.28 1.12e-08 - no
KW 0 oxidative - 11/200 7.82 2.12e-08 - no
KW 0 bacterial - 11/200 7.29 4.59e-08 1.36E-15 no
KW 0 leaves - 19/200 3.84 1.46e-07 9.42E-17 yes
KW 0 endomembrane - 46/200 1.95 2.75e-06 - no
KW 0 electron - 14/200 3.93 3.41e-06 - no
KW 0 system - 46/200 1.90 5.38e-06 - no
KW 0 carrier - 14/200 3.49 1.41e-05 4.26E-16 no
KW 0 member - 25/200 2.28 3.99e-05 - no
KW 0 membrane - 45/200 1.69 1.25e-04 1.00E-20 yes
KW 0 anthesis - 27/200 2.05 1.27e-04 - no
KW 0 active - 19/200 2.32 2.24e-04 - no
KW 0 integral - 11/200 3.08 2.72e-04 1.00E-20 no
KW 0 putative - 38/200 1.65 7.17e-04 - no
KW 0 transport - 20/200 2.06 7.94e-04 8.46E-16 no
KW 0 differentiation - 27/200 1.79 1.17e-03 - no
KW 0 glycosyl - 11/200 2.58 1.30e-03 - no
KW 0 plasma - 21/200 1.83 2.63e-03 1.69E-15 yes
KW 0 petal - 25/200 1.71 3.00e-03 - no
KW 0 group - 12/200 2.23 3.15e-03 - no
KW 0 receptor - 11/200 2.31 3.18e-03 1.00E-31 no
KW 0 expansion - 25/200 1.70 3.31e-03 - no
KW 0 ipr000719 - 13/200 2.09 4.19e-03 - no
KW 0 ipr011009 - 13/200 2.01 5.76e-03 - no
KW 0 hydrolase - 14/200 1.92 6.85e-03 - no
KW 0 leucine - 11/200 2.10 6.86e-03 - no
KW 0 ipr017442 - 11/200 2.09 7.04e-03 - no
KW 0 threonine - 14/200 1.87 8.71e-03 - no
KW 0 phosphorylation - 12/200 1.95 9.24e-03 - no
(*1) [B]:Biological process(Gene ontology), [C]:Cellular component(Gene ontology), [M]:Molecular function(Gene ontology), [PS]:Plant Structure(Plant ontology), [KW]:words found in gene description.
(*2) ([# of genes with the term] / [# of sampling (200)]) / ([# of genes with the term among whole genes] / [# of whole genes])
(*3) P-values were calculated on hypergeometric distribution in which we found n genes with a annotation term during 200 highly correlated genes, while we had N genes with the term in the whole genes.
(*4) PosMed is a system which serve a p-values showing a relationship between the gene and the annotation term based on literature information and Gene-Gene interaction suchas co-expression or protein-protein interactions.
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