OMAT2P109080 (↑ Click "Links", if this line appears at the beginning.)

Other supporting information

Gene Model

Correlation Plot


Expression profile (Values are plotted in Log(2) values.)

Genes with related expresssion profiles.
Positively Correlated Genes
GensPCC Definition Overlap geneDefinition Overlap gene(antisense)Definition
OMAT5P020180 0.990828 - AT5G65370 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related - -
OMAT2P004170 0.990318 - AT2G22121 LCR35 (Low-molecular-weight cysteine-rich 35) - -
OMAT5P005150 0.99 - AT5G15000 Encodes a ECA1 gametogenesis related family protein - -
OMAT1P116830 0.989707 - AT1G67775 CLE8 (CLAVATA3/ESR-RELATED 8) - -
OMAT5P109250 0.989409 - AT5G39260 ATEXPA21 (ARABIDOPSIS THALIANA EXPANSIN A21) - -
OMAT4P006300 0.989263 - AT4G20800 FAD-binding domain-containing protein - -
OMAT4P103450 0.989039 - AT4G15050 unknown protein - -
OMAT5P114430 0.98899 - AT5G55320 membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-related - -
OMAT2P000470 0.988396 - AT2G02498 unknown protein - -
OMAT4P108180 0.988287 - AT4G29280 LCR22 (Low-molecular-weight cysteine-rich 22) - -
Negatively Correlated Genes
GensPCC Definition Overlap geneDefinition Overlap gene(antisense)Definition
OMAT4P103410 -0.557772 - AT4G14900 hydroxyproline-rich glycoprotein family protein - -
OMAT2P005910 -0.502915 - AT2G27050 EIL1 (ETHYLENE-INSENSITIVE3-LIKE 1) - -
OMAT1P111590 -0.500975 - AT1G47860 transposable element gene - -
OMAT1P117920 -0.488015 - AT1G70780,AT1G70782 [AT1G70780]unknown protein, [AT1G70782]CPuORF28 (Conserved peptide upstream open reading frame 28) - -
OMAT3P104620 -0.486003 - AT3G13910 unknown protein - -
OMAT1P020990 -0.485036 - AT1G72630 ELF4-L2 (ELF4-Like 2) - -
OMAT4P103060 -0.482057 - - - AT4G13940 MEE58 (MATERNAL EFFECT EMBRYO ARREST 58)
OMAT1P014770 -0.473902 - AT1G53400 unknown protein AT1G53410 pre-tRNA
OMAT3P103750 -0.470084 - AT3G11450 DNAJ heat shock N-terminal domain-containing protein / cell division protein-related - -
OMAT1P104440 -0.466124 - AT1G13750 calcineurin-like phosphoesterase family protein AT1G13740 AFP2 (ABI FIVE BINDING PROTEIN 2)

Get whole results

Over-Representation Analysis Result

p-value <= 1.00e-06:20 terms with high significance
1.00e-06 < p-value <= 8.76e-06 :With considering multiple testing correction;
p <= 1.00e-02 / 1142
8.76e-06 < p-value <= 1.00e-02

Type of term (*1) Depth of the term in ontology tree ID/Term Description Number of genes Over-Representative rate (*2) p-value (*3) PosMed p-value (*4)
(Link to PosMed)		 Found on gene annotation
B 4 GO:0009698 phenylpropanoid metabolic process 10/200 9.78 7.58e-09 - no
B 5 GO:0006575 cellular amino acid derivative metabolic process 12/200 6.93 2.46e-08 - no
B 3 GO:0019748 secondary metabolic process 13/200 5.61 1.04e-07 - no
B 4 GO:0006725 cellular aromatic compound metabolic process 10/200 4.63 1.26e-05 - no
B 4 GO:0006519 cellular amino acid and derivative metabolic process 12/200 3.45 5.31e-05 - no
B 4 GO:0005975 carbohydrate metabolic process 13/200 2.50 8.12e-04 - no
B 4 GO:0044248 cellular catabolic process 10/200 2.77 1.09e-03 - no
B 3 GO:0009056 catabolic process 12/200 2.52 1.10e-03 - no
B 5 GO:0051252 regulation of RNA metabolic process 12/200 2.30 2.45e-03 - no
B 5 GO:0032774 RNA biosynthetic process 12/200 2.19 3.65e-03 - no
C 3 GO:0012505 endomembrane system 82/200 3.37 1.04e-25 - no
C 3 GO:0044464 cell part 130/200 1.42 1.34e-08 - no
M 5 GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds 10/200 4.04 4.43e-05 - no
M 4 GO:0016798 hydrolase activity, acting on glycosyl bonds 10/200 3.76 8.30e-05 - no
M 3 GO:0016787 hydrolase activity 25/200 1.60 7.24e-03 - no
PS 3 PO:0020092 female gametophyte 11/200 4.06 2.02e-05 - no
KW 0 endomembrane - 81/200 3.43 8.66e-26 - no
KW 0 system - 81/200 3.34 4.51e-25 - no
KW 0 globular - 27/200 7.19 1.47e-16 - no
KW 0 stage - 42/200 2.17 4.57e-07 - no
KW 0 petal - 31/200 2.12 2.25e-05 - no
KW 0 expansion - 31/200 2.11 2.60e-05 - no
KW 0 glycosyl - 14/200 3.28 2.85e-05 - no
KW 0 differentiation - 31/200 2.05 4.48e-05 - no
KW 0 inhibitor - 11/200 3.68 5.27e-05 - no
KW 0 glycoside - 10/200 3.80 7.66e-05 - no
KW 0 ipr001810 - 12/200 2.95 2.49e-04 - no
KW 0 hydrolase - 17/200 2.33 4.14e-04 - no
KW 0 catabolic - 10/200 3.00 5.71e-04 - no
KW 0 catalytic - 21/200 2.07 5.72e-04 - no
KW 0 process - 35/200 1.71 5.81e-04 - no
KW 0 anthesis - 25/200 1.90 6.91e-04 - no
KW 0 cyclin - 12/200 2.57 9.12e-04 - no
KW 0 encodes - 40/200 1.57 1.38e-03 - no
KW 0 carbohydrate - 10/200 2.55 2.10e-03 - no
KW 0 biological_process - 78/200 1.30 2.27e-03 - yes
KW 0 subgroup - 10/200 2.46 2.74e-03 - no
KW 0 molecular_function - 67/200 1.33 3.45e-03 - yes
KW 0 function - 26/200 1.67 3.70e-03 1.00E-43 yes
KW 0 dependent - 23/200 1.72 4.06e-03 - no
KW 0 embryo - 14/200 2.02 4.43e-03 - no
(*1) [B]:Biological process(Gene ontology), [C]:Cellular component(Gene ontology), [M]:Molecular function(Gene ontology), [PS]:Plant Structure(Plant ontology), [KW]:words found in gene description.
(*2) ([# of genes with the term] / [# of sampling (200)]) / ([# of genes with the term among whole genes] / [# of whole genes])
(*3) P-values were calculated on hypergeometric distribution in which we found n genes with a annotation term during 200 highly correlated genes, while we had N genes with the term in the whole genes.
(*4) PosMed is a system which serve a p-values showing a relationship between the gene and the annotation term based on literature information and Gene-Gene interaction suchas co-expression or protein-protein interactions.
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