OMAT3P002410 (↑ Click "Links", if this line appears at the beginning.)

Other supporting information

Gene Model

Correlation Plot


Expression profile (Values are plotted in Log(2) values.)

Genes with related expresssion profiles.
Positively Correlated Genes
GensPCC Definition Overlap geneDefinition Overlap gene(antisense)Definition
OMAT4P012910 0.922453 - AT4G37390 BRU6 - -
OMAT1P002380 0.875067 - AT1G07400 17.8 kDa class I heat shock protein (HSP17.8-CI) - -
OMAT3P010190 0.862696 - AT3G27110 peptidase M48 family protein - -
OMAT3P005670 0.852561 - AT3G15500 ANAC055 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 55) - -
OMAT1P113350 0.84772 - AT1G54050 17.4 kDa class III heat shock protein (HSP17.4-CIII) - -
OMAT2P013100 0.844099 - AT2G46240 BAG6 (BCL-2-ASSOCIATED ATHANOGENE 6) - -
OMAT1P004930 0.842092 - AT1G13990 unknown protein - -
OMAT4P003420 0.838589 - AT4G13110 BSD domain-containing protein - -
OMAT1P010420 0.831831 - AT1G29760 FUNCTIONS IN: molecular_function unknown - -
OMAT3P112420 0.830401 - AT3G52770 ZPR3 (LITTLE ZIPPER 3) - -
Negatively Correlated Genes
GensPCC Definition Overlap geneDefinition Overlap gene(antisense)Definition
OMAT4P003700 -0.848482 - AT4G13940 MEE58 (MATERNAL EFFECT EMBRYO ARREST 58) - -
OMAT4P110430 -0.833954 - AT4G35260 IDH1 (ISOCITRATE DEHYDROGENASE 1) - -
OMAT3P102750 -0.825671 - AT3G08580 AAC1 (ADP/ATP CARRIER 1) - -
OMAT2P108340 -0.82153 - AT2G36530 LOS2 - -
OMAT5P107640 -0.819577 - AT5G25510 serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative - -
OMAT4P100310 -0.815782 - AT4G00860 ATOZI1 - -
OMAT1P114380 -0.809183 - AT1G58350 ZW18 - -
OMAT3P000180 -0.792094 - AT3G01345 Expressed protein - -
OMAT5P103950 -0.789568 - AT5G14040 mitochondrial phosphate transporter - -
OMAT2P105080 -0.788208 - AT2G26680 FUNCTIONS IN: molecular_function unknown - -

Get whole results

Over-Representation Analysis Result

p-value <= 2.61e-19:20 terms with high significance
2.61e-19 < p-value <= 8.76e-06 :With considering multiple testing correction;
p <= 1.00e-02 / 1142
8.76e-06 < p-value <= 1.00e-02

Type of term (*1) Depth of the term in ontology tree ID/Term Description Number of genes Over-Representative rate (*2) p-value (*3) PosMed p-value (*4)
(Link to PosMed)		 Found on gene annotation
B 4 GO:0009408 response to heat 14/200 17.64 3.33e-15 - no
B 4 GO:0009266 response to temperature stimulus 16/200 7.02 1.78e-10 - no
B 3 GO:0006950 response to stress 33/200 2.66 8.11e-08 - no
B 3 GO:0009628 response to abiotic stimulus 24/200 3.24 1.20e-07 - no
B 4 GO:0044248 cellular catabolic process 14/200 3.88 4.01e-06 - no
B 3 GO:0009056 catabolic process 16/200 3.35 6.95e-06 - no
B 3 GO:0042221 response to chemical stimulus 27/200 2.37 1.05e-05 - no
B 4 GO:0010035 response to inorganic substance 10/200 3.51 1.53e-04 - no
B 4 GO:0010033 response to organic substance 15/200 2.24 1.19e-03 - no
B 3 GO:0051716 cellular response to stimulus 11/200 2.49 1.75e-03 - no
B 5 GO:0006508 proteolysis 10/200 2.39 3.49e-03 - no
C 3 GO:0044424 intracellular part 72/200 1.41 3.55e-04 - no
C 3 GO:0005622 intracellular 74/200 1.39 4.71e-04 - no
C 4 GO:0043231 intracellular membrane-bounded organelle 63/200 1.43 6.41e-04 - no
C 3 GO:0043227 membrane-bounded organelle 63/200 1.43 6.43e-04 - no
C 4 GO:0005737 cytoplasm 54/200 1.44 1.49e-03 - no
C 3 GO:0043229 intracellular organelle 63/200 1.36 2.39e-03 - no
C 5 GO:0009536 plastid 30/200 1.62 2.97e-03 - no
C 4 GO:0044444 cytoplasmic part 48/200 1.38 6.50e-03 - no
M 3 GO:0005515 protein binding 31/200 1.98 8.59e-05 - no
M 3 GO:0003700 transcription factor activity 19/200 1.88 2.88e-03 - no
M 5 GO:0046872 metal ion binding 23/200 1.69 4.78e-03 - no
M 4 GO:0003677 DNA binding 23/200 1.66 6.11e-03 - no
M 4 GO:0043169 cation binding 23/200 1.60 9.41e-03 - no
M 3 GO:0043167 ion binding 23/200 1.60 9.41e-03 - no
PS 3 PO:0020091 male gametophyte 164/200 1.98 6.57e-33 - yes
PS 4 PO:0006345 pollen tube 96/200 3.30 3.67e-30 - yes
PS 5 PO:0009028 microsporophyll 161/200 1.92 7.66e-30 - yes
PS 5 PO:0009027 megasporophyll 157/200 1.87 8.68e-27 - yes
PS 4 PO:0009047 stem 157/200 1.86 1.61e-26 - yes
PS 4 PO:0009026 sporophyll 162/200 1.80 1.90e-26 - yes
PS 3 PO:0006001 phyllome 166/200 1.62 1.06e-21 - yes
PS 3 PO:0009031 sepal 156/200 1.69 6.46e-21 - yes
PS 4 PO:0009049 inflorescence 165/200 1.58 7.25e-20 - yes
PS 3 PO:0009006 shoot 168/200 1.55 9.72e-20 - yes
PS 5 PO:0009046 flower 164/200 1.58 1.48e-19 - yes
PS 3 PO:0009013 meristem 142/200 1.77 2.38e-19 - yes
PS 3 PO:0000084 sperm cell 85/200 2.62 2.56e-19 - yes
PS 3 PO:0020097 generative cell 85/200 2.62 2.56e-19 - yes
PS 3 PO:0009032 petal 149/200 1.70 2.61e-19 - yes
PS 3 PO:0009005 root 151/200 1.68 3.42e-19 - yes
PS 4 PO:0000230 inflorescence meristem 139/200 1.79 3.71e-19 - yes
PS 4 PO:0009025 leaf 152/200 1.65 1.04e-18 - yes
PS 4 PO:0020030 cotyledon 133/200 1.81 2.96e-18 - yes
PS 5 PO:0008034 leaf whorl 153/200 1.62 4.84e-18 - yes
PS 4 PO:0008033 phyllome whorl 153/200 1.62 4.84e-18 - yes
PS 5 PO:0000013 cauline leaf 136/200 1.76 9.74e-18 - yes
PS 5 PO:0009052 pedicel 138/200 1.70 1.30e-16 - yes
PS 5 PO:0020039 leaf lamina 139/200 1.69 1.49e-16 - yes
PS 4 PO:0009009 embryo 152/200 1.57 2.72e-16 - yes
PS 3 PO:0009010 seed 153/200 1.56 3.07e-16 - yes
PS 4 PO:0009001 fruit 153/200 1.56 5.47e-16 - yes
PS 3 PO:0006342 infructescence 153/200 1.56 5.47e-16 - yes
PS 5 PO:0008037 seedling 143/200 1.62 1.16e-15 - yes
PS 4 PO:0000037 shoot apex 135/200 1.57 7.93e-13 - yes
PS 5 PO:0020038 petiole 124/200 1.63 2.05e-12 - yes
PG 5 PO:0007605 androecium developmental stages 86/200 2.94 6.23e-23 - yes
PG 4 PO:0007616 4 anthesis 163/200 1.68 7.32e-23 - yes
PG 3 PO:0007615 flower development stages 168/200 1.60 7.64e-22 - yes
PG 4 PO:0007600 3 floral organ development stages 165/200 1.62 2.14e-21 - yes
PG 5 PO:0007604 corolla developmental stages 160/200 1.62 6.81e-20 - yes
PG 5 PO:0007133 leaf production 145/200 1.72 6.07e-19 - yes
PG 4 PO:0007112 1 main shoot growth 145/200 1.72 6.21e-19 - yes
PG 3 PO:0007134 A vegetative growth 145/200 1.71 1.30e-18 - yes
PG 5 PO:0001185 C globular stage 140/200 1.71 2.77e-17 - yes
PG 4 PO:0001054 4 leaf senescence stage 132/200 1.72 8.13e-16 - yes
PG 4 PO:0007631 embryo development stages 145/200 1.61 8.19e-16 - yes
PG 3 PO:0001050 leaf development stages 132/200 1.72 8.55e-16 - yes
PG 3 PO:0001170 seed development stages 145/200 1.60 1.28e-15 - yes
PG 5 PO:0004507 D bilateral stage 132/200 1.60 3.95e-13 - yes
PG 5 PO:0001078 E expanded cotyledon stage 131/200 1.58 2.16e-12 - yes
PG 5 PO:0001081 F mature embryo stage 127/200 1.60 3.55e-12 - yes
KW 0 response - 45/200 2.51 2.04e-09 - no
KW 0 shock - 13/200 6.93 7.56e-09 - no
KW 0 ipr013083 - 15/200 4.79 1.26e-07 - no
KW 0 chaperone - 10/200 6.55 4.53e-07 - no
KW 0 ipr001841 - 14/200 4.56 5.44e-07 - no
KW 0 stress - 17/200 3.62 1.32e-06 - no
KW 0 ubiquitin - 16/200 3.56 3.17e-06 - no
KW 0 catabolic - 13/200 3.90 7.51e-06 - no
KW 0 c3hc4 - 10/200 4.61 1.32e-05 - no
KW 0 finger - 23/200 2.49 1.98e-05 - no
KW 0 transcriptional - 10/200 4.15 3.47e-05 - no
KW 0 ligase - 12/200 3.07 1.68e-04 - no
KW 0 chloroplast - 32/200 1.81 3.51e-04 - no
KW 0 containing - 28/200 1.68 2.45e-03 - no
KW 0 transcription - 25/200 1.72 2.82e-03 - no
KW 0 dependent - 22/200 1.64 8.03e-03 - no
(*1) [B]:Biological process(Gene ontology), [C]:Cellular component(Gene ontology), [M]:Molecular function(Gene ontology), [PS]:Plant Structure(Plant ontology), [PG]:Growth and developmental stages(Plant ontology), [KW]:words found in gene description.
(*2) ([# of genes with the term] / [# of sampling (200)]) / ([# of genes with the term among whole genes] / [# of whole genes])
(*3) P-values were calculated on hypergeometric distribution in which we found n genes with a annotation term during 200 highly correlated genes, while we had N genes with the term in the whole genes.
(*4) PosMed is a system which serve a p-values showing a relationship between the gene and the annotation term based on literature information and Gene-Gene interaction suchas co-expression or protein-protein interactions.
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