OMAT3P014700 (↑ Click "Links", if this line appears at the beginning.)

Other supporting information

Gene Model

Correlation Plot


Expression profile (Values are plotted in Log(2) values.)

Genes with related expresssion profiles.
Positively Correlated Genes
GensPCC Definition Overlap geneDefinition Overlap gene(antisense)Definition
OMAT5P000960 0.966587 - AT5G03390 unknown protein - -
OMAT1P116280 0.959594 - AT1G65900 unknown protein - -
OMAT4P007260 0.958951 - AT4G23800 high mobility group (HMG1/2) family protein - -
OMAT4P011040 0.958411 - AT4G32830 AtAUR1 (ATAURORA1) - -
OMAT1P119290 0.956961 - AT1G75090 methyladenine glycosylase family protein AT1G75080 BZR1 (BRASSINAZOLE-RESISTANT 1)
OMAT2P003320 0.956956 - AT2G19690 PLA2-BETA (PHOSPHOLIPASE A2-BETA) - -
OMAT1P107760 0.954764 - AT1G24020 MLP423 (MLP-LIKE PROTEIN 423) - -
OMAT2P102770 0.954397 - AT2G19170 SLP3 - -
OMAT3P009080 0.951852 - AT3G23890 TOPII (TOPOISOMERASE II) - -
OMAT5P009130 0.951464 - AT5G26850 INVOLVED IN: biological_process unknown - -
Negatively Correlated Genes
GensPCC Definition Overlap geneDefinition Overlap gene(antisense)Definition
OMAT1P023480 -0.708613 - AT1G78870 UBC35 (UBIQUITIN-CONJUGATING ENZYME 35) - -
OMAT3P002350 -0.675077 - AT3G66654 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein - -
OMAT3P000060 -0.671715 - AT3G01170 structural constituent of ribosome - -
OMAT3P113500 -0.670727 - AT3G55560 AGF2 (AT-hook protein of GA feedback 2) - -
OMAT3P113720 -0.645536 - AT3G56190 ALPHA-SNAP2 (ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN 2) - -
OMAT2P111860 -0.638943 - AT2G45980 unknown protein - -
OMAT5P115320 -0.636852 - AT5G58070 TIL (TEMPERATURE-INDUCED LIPOCALIN) - -
OMAT4P000140 -0.6324 - AT4G00355 unknown protein - -
OMAT5P001190 -0.630396 - AT5G04040 SDP1 (SUGAR-DEPENDENT1) - -
OMAT3P015960 -0.629592 - AT3G57090 BIGYIN - -

Get whole results

Over-Representation Analysis Result

p-value <= 1.35e-28:20 terms with high significance
1.35e-28 < p-value <= 8.76e-06 :With considering multiple testing correction;
p <= 1.00e-02 / 1142
8.76e-06 < p-value <= 1.00e-02

Type of term (*1) Depth of the term in ontology tree ID/Term Description Number of genes Over-Representative rate (*2) p-value (*3) PosMed p-value (*4)
(Link to PosMed)		 Found on gene annotation
B 3 GO:0007049 cell cycle 13/200 8.38 6.59e-10 2.19E-13 no
B 4 GO:0006629 lipid metabolic process 20/200 4.60 3.30e-09 - no
B 4 GO:0044255 cellular lipid metabolic process 12/200 4.46 3.58e-06 - no
B 3 GO:0048856 anatomical structure development 24/200 2.68 3.69e-06 - no
B 3 GO:0007275 multicellular organismal development 26/200 2.45 8.27e-06 - no
B 3 GO:0009653 anatomical structure morphogenesis 13/200 3.87 8.31e-06 - no
B 3 GO:0009791 post-embryonic development 16/200 2.70 1.03e-04 - no
B 4 GO:0048608 reproductive structure development 14/200 2.87 1.28e-04 - no
B 3 GO:0003006 reproductive developmental process 15/200 2.72 1.46e-04 - no
B 3 GO:0022414 reproductive process 15/200 2.49 3.97e-04 - no
B 4 GO:0048513 organ development 12/200 2.71 5.55e-04 - no
B 4 GO:0048731 system development 12/200 2.71 5.62e-04 2.19E-13 no
B 3 GO:0006996 organelle organization 10/200 3.00 5.80e-04 - yes
B 3 GO:0044281 small molecule metabolic process 18/200 2.00 1.78e-03 - no
B 3 GO:0044238 primary metabolic process 67/200 1.35 2.12e-03 - no
B 5 GO:0043436 oxoacid metabolic process 10/200 2.27 5.01e-03 - no
B 4 GO:0006082 organic acid metabolic process 10/200 2.27 5.11e-03 - no
B 4 GO:0042180 cellular ketone metabolic process 10/200 2.23 5.75e-03 - no
C 5 GO:0005856 cytoskeleton 11/200 9.78 1.71e-09 0 yes
C 4 GO:0044430 cytoskeletal part 10/200 10.59 3.29e-09 - no
C 3 GO:0044464 cell part 126/200 1.38 3.10e-07 - yes
C 3 GO:0043228 non-membrane-bounded organelle 16/200 2.68 1.13e-04 - yes
C 4 GO:0043232 intracellular non-membrane-bounded organelle 16/200 2.68 1.13e-04 - yes
C 3 GO:0012505 endomembrane system 41/200 1.69 2.64e-04 - no
C 3 GO:0043234 protein complex 14/200 2.14 2.55e-03 2.19E-13 no
M 3 GO:0016787 hydrolase activity 44/200 2.82 7.93e-11 - no
M 5 GO:0004091 carboxylesterase activity 12/200 5.99 1.33e-07 - no
M 4 GO:0016798 hydrolase activity, acting on glycosyl bonds 11/200 4.14 1.69e-05 - no
M 4 GO:0016788 hydrolase activity, acting on ester bonds 16/200 2.69 1.09e-04 - no
M 5 GO:0030554 adenyl nucleotide binding 21/200 2.32 1.15e-04 - no
M 4 GO:0001883 purine nucleoside binding 21/200 2.32 1.15e-04 - no
M 3 GO:0001882 nucleoside binding 21/200 2.32 1.19e-04 - no
M 5 GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 13/200 2.92 1.70e-04 - no
M 4 GO:0016817 hydrolase activity, acting on acid anhydrides 13/200 2.89 1.88e-04 - no
M 4 GO:0017076 purine nucleotide binding 22/200 2.12 3.08e-04 - no
M 3 GO:0016740 transferase activity 29/200 1.77 8.99e-04 - no
M 5 GO:0016773 phosphotransferase activity, alcohol group as acceptor 13/200 2.09 4.05e-03 - no
M 5 GO:0032555 purine ribonucleotide binding 18/200 1.83 4.67e-03 - no
M 4 GO:0032553 ribonucleotide binding 18/200 1.83 4.67e-03 - no
M 3 GO:0000166 nucleotide binding 22/200 1.67 6.83e-03 - no
M 5 GO:0016301 kinase activity 15/200 1.86 7.21e-03 - no
PS 3 PO:0009031 sepal 174/200 1.88 1.25e-34 - no
PS 3 PO:0009032 petal 170/200 1.94 1.60e-34 - no
PS 5 PO:0008034 leaf whorl 172/200 1.82 1.71e-31 - no
PS 4 PO:0008033 phyllome whorl 172/200 1.82 1.71e-31 - no
PS 4 PO:0009049 inflorescence 179/200 1.71 1.15e-30 2.20E-18 no
PS 5 PO:0009046 flower 178/200 1.71 3.56e-30 - no
PS 3 PO:0009006 shoot 181/200 1.67 6.03e-30 - no
PS 3 PO:0006001 phyllome 176/200 1.72 2.16e-29 - no
PS 3 PO:0009010 seed 172/200 1.76 4.14e-29 2.19E-13 no
PS 4 PO:0009009 embryo 171/200 1.77 4.38e-29 2.19E-13 no
PS 4 PO:0009001 fruit 172/200 1.75 8.96e-29 - no
PS 3 PO:0006342 infructescence 172/200 1.75 8.96e-29 - no
PS 5 PO:0009052 pedicel 157/200 1.93 1.35e-28 - no
PS 4 PO:0000037 shoot apex 153/200 1.78 1.02e-22 - no
PS 4 PO:0009025 leaf 152/200 1.65 1.04e-18 2.19E-13 no
PS 4 PO:0009026 sporophyll 149/200 1.66 5.06e-18 - no
PS 5 PO:0009027 megasporophyll 143/200 1.70 6.68e-18 - no
PS 5 PO:0020039 leaf lamina 134/200 1.63 4.85e-14 - no
PS 5 PO:0020038 petiole 123/200 1.62 5.60e-12 - no
PS 5 PO:0000013 cauline leaf 120/200 1.55 2.94e-10 - no
PS 5 PO:0009028 microsporophyll 124/200 1.48 3.41e-09 - no
PS 3 PO:0020091 male gametophyte 122/200 1.47 8.34e-09 - no
PS 5 PO:0008037 seedling 125/200 1.42 5.74e-08 - no
PS 3 PO:0009013 meristem 107/200 1.33 5.12e-05 - no
PS 3 PO:0009005 root 116/200 1.29 8.22e-05 2.19E-13 no
PS 3 PO:0000034 vascular system 10/200 3.06 4.84e-04 - no
PS 4 PO:0000230 inflorescence meristem 99/200 1.27 8.50e-04 - no
PG 3 PO:0001170 seed development stages 172/200 1.90 3.13e-34 - no
PG 4 PO:0007631 embryo development stages 170/200 1.89 9.15e-33 - no
PG 5 PO:0001185 C globular stage 163/200 1.99 9.73e-33 - no
PG 4 PO:0007616 4 anthesis 175/200 1.80 2.90e-32 - no
PG 5 PO:0007604 corolla developmental stages 173/200 1.75 2.35e-29 - no
PG 4 PO:0007600 3 floral organ development stages 175/200 1.72 5.71e-29 - yes
PG 3 PO:0007615 flower development stages 177/200 1.69 7.73e-29 - yes
PG 5 PO:0001081 F mature embryo stage 151/200 1.90 1.63e-25 - no
PG 5 PO:0001078 E expanded cotyledon stage 152/200 1.83 5.98e-24 - no
PG 5 PO:0004507 D bilateral stage 150/200 1.82 4.94e-23 - no
PG 4 PO:0001054 4 leaf senescence stage 121/200 1.57 8.47e-11 - no
PG 3 PO:0001050 leaf development stages 121/200 1.57 8.83e-11 - no
PG 5 PO:0007133 leaf production 116/200 1.38 1.98e-06 2.19E-13 no
PG 4 PO:0007112 1 main shoot growth 116/200 1.38 2.00e-06 - no
PG 3 PO:0007134 A vegetative growth 116/200 1.37 2.98e-06 2.19E-13 no
KW 0 microtubule - 11/200 10.70 6.13e-10 - no
KW 0 globular - 17/200 4.53 5.13e-08 - no
KW 0 ipr013210 - 10/200 7.59 1.03e-07 - no
KW 0 pectin - 10/200 6.60 4.19e-07 - no
KW 0 region - 33/200 2.28 2.65e-06 2.19E-13 no
KW 0 lyase - 10/200 5.04 5.71e-06 2.19E-13 no
KW 0 metabolic - 27/200 2.35 1.20e-05 2.19E-13 no
KW 0 ipr001611 - 11/200 3.89 3.08e-05 - no
KW 0 anthesis - 28/200 2.13 5.12e-05 - no
KW 0 endomembrane - 41/200 1.73 1.46e-04 - no
KW 0 system - 41/200 1.69 2.49e-04 2.19E-13 no
KW 0 tyrosine - 11/200 3.10 2.60e-04 - no
KW 0 mature - 20/200 2.24 2.65e-04 2.55E-16 yes
KW 0 process - 36/200 1.76 2.84e-04 2.19E-13 no
KW 0 associated - 16/200 2.34 5.46e-04 2.19E-13 no
KW 0 differentiation - 28/200 1.85 5.49e-04 - no
KW 0 catalytic - 21/200 2.07 5.72e-04 2.19E-13 no
KW 0 regulation - 25/200 1.89 7.54e-04 1.97E-15 no
KW 0 terminal - 33/200 1.71 7.91e-04 2.19E-13 no
KW 0 hydrolase - 16/200 2.19 1.12e-03 - no
KW 0 encodes - 40/200 1.57 1.38e-03 2.19E-13 no
KW 0 signaling - 10/200 2.69 1.40e-03 2.19E-13 no
KW 0 petal - 26/200 1.78 1.46e-03 - no
KW 0 expansion - 26/200 1.77 1.62e-03 - no
KW 0 embryo - 15/200 2.16 1.76e-03 2.19E-13 no
KW 0 development - 15/200 2.15 1.84e-03 2.19E-13 no
KW 0 leucine - 12/200 2.29 2.55e-03 2.19E-13 no
KW 0 group - 12/200 2.23 3.15e-03 0 no
KW 0 receptor - 11/200 2.31 3.18e-03 - no
KW 0 stage - 31/200 1.60 3.21e-03 2.19E-13 yes
KW 0 active - 16/200 1.95 3.70e-03 2.19E-13 no
KW 0 serine - 17/200 1.91 3.80e-03 2.19E-13 no
KW 0 glycosyl - 10/200 2.35 3.96e-03 - no
KW 0 ipr000719 - 13/200 2.09 4.19e-03 - no
KW 0 ipr011009 - 13/200 2.01 5.76e-03 - no
KW 0 pollen - 16/200 1.79 8.53e-03 2.81E-17 yes
KW 0 threonine - 14/200 1.87 8.71e-03 - no
KW 0 kinase - 18/200 1.71 9.82e-03 2.19E-13 no
(*1) [B]:Biological process(Gene ontology), [C]:Cellular component(Gene ontology), [M]:Molecular function(Gene ontology), [PS]:Plant Structure(Plant ontology), [PG]:Growth and developmental stages(Plant ontology), [KW]:words found in gene description.
(*2) ([# of genes with the term] / [# of sampling (200)]) / ([# of genes with the term among whole genes] / [# of whole genes])
(*3) P-values were calculated on hypergeometric distribution in which we found n genes with a annotation term during 200 highly correlated genes, while we had N genes with the term in the whole genes.
(*4) PosMed is a system which serve a p-values showing a relationship between the gene and the annotation term based on literature information and Gene-Gene interaction suchas co-expression or protein-protein interactions.
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