OMAT5P012140 (↑ Click "Links", if this line appears at the beginning.)

Other supporting information

Gene Model

Correlation Plot


Expression profile (Values are plotted in Log(2) values.)

Genes with related expresssion profiles.
Positively Correlated Genes
GensPCC Definition Overlap geneDefinition Overlap gene(antisense)Definition
OMAT1P011490 0.938483 - AT1G32810 protein binding / zinc ion binding - -
OMAT3P010490 0.908736 - - - AT3G27997 pseudogene of unknown protein
OMAT4P008060 0.902994 - AT4G25800 calmodulin-binding protein - -
OMAT3P016550 0.897759 - AT3G58900 F-box family protein - -
OMAT3P005020 0.897619 - AT3G14100 oligouridylate-binding protein, putative - -
OMAT5P020390 0.893133 - AT5G65770 LINC4 (LITTLE NUCLEI4) - -
OMAT1P015270 0.892325 - AT1G54920 unknown protein - -
OMAT1P012550 0.892043 - AT1G43850 SEU (seuss) - -
OMAT1P008040 0.889154 - AT1G22070 TGA3 - -
OMAT2P107380 0.88741 - AT2G33770 PHO2 (PHOSPHATE 2) - -
Negatively Correlated Genes
GensPCC Definition Overlap geneDefinition Overlap gene(antisense)Definition
OMAT2P002950 -0.673496 - - - AT2G18540 cupin family protein
OMAT1P105040 -0.652653 - AT1G15175 other RNA - -
OMAT2P100520 -0.646464 - AT2G02500 ISPD - -
OMAT4P011630 -0.645776 - AT4G34260 FUC95A - -
OMAT1P102290 -0.640401 - AT1G07570 APK1A - -
OMAT3P110130 -0.62557 - - - AT3G45140 LOX2 (LIPOXYGENASE 2)
OMAT4P102870 -0.619994 - - - AT4G13340 leucine-rich repeat family protein / extensin family protein
OMAT1P103770 -0.614172 - - - AT1G11860 aminomethyltransferase, putative
OMAT2P110980 -0.613254 - - - AT2G43030 ribosomal protein L3 family protein
OMAT1P120410 -0.605952 - - - AT1G78040 pollen Ole e 1 allergen and extensin family protein

Get whole results

Over-Representation Analysis Result

p-value <= 8.87e-13:20 terms with high significance
8.87e-13 < p-value <= 8.76e-06 :With considering multiple testing correction;
p <= 1.00e-02 / 1142
8.76e-06 < p-value <= 1.00e-02

Type of term (*1) Depth of the term in ontology tree ID/Term Description Number of genes Over-Representative rate (*2) p-value (*3) PosMed p-value (*4)
(Link to PosMed)		 Found on gene annotation
B 3 GO:0050789 regulation of biological process 38/200 2.20 1.23e-06 - no
B 3 GO:0050794 regulation of cellular process 32/200 2.10 2.18e-05 - no
B 5 GO:0010468 regulation of gene expression 25/200 2.35 2.50e-05 - no
B 4 GO:0060255 regulation of macromolecule metabolic process 25/200 2.28 3.92e-05 - no
B 3 GO:0019222 regulation of metabolic process 25/200 2.12 1.29e-04 - no
B 5 GO:0010556 regulation of macromolecule biosynthetic process 22/200 2.23 1.45e-04 - no
B 4 GO:0080090 regulation of primary metabolic process 23/200 2.18 1.49e-04 - no
B 5 GO:0019219 regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 22/200 2.19 1.88e-04 - no
B 4 GO:0009889 regulation of biosynthetic process 22/200 2.19 1.92e-04 - no
B 5 GO:0031326 regulation of cellular biosynthetic process 22/200 2.19 1.92e-04 - no
B 4 GO:0051171 regulation of nitrogen compound metabolic process 22/200 2.17 2.17e-04 - no
B 4 GO:0031323 regulation of cellular metabolic process 23/200 2.13 2.21e-04 - no
B 5 GO:0051252 regulation of RNA metabolic process 14/200 2.68 2.68e-04 - no
B 5 GO:0032774 RNA biosynthetic process 14/200 2.56 4.39e-04 - no
B 5 GO:0006350 transcription 21/200 2.06 6.04e-04 4.00E-10 no
B 5 GO:0016070 RNA metabolic process 17/200 2.00 2.32e-03 - no
B 4 GO:0006952 defense response 10/200 2.20 6.39e-03 - no
B 3 GO:0009791 post-embryonic development 12/200 2.03 6.85e-03 - no
B 4 GO:0010033 response to organic substance 13/200 1.94 7.65e-03 - no
B 3 GO:0022414 reproductive process 12/200 1.99 7.92e-03 - no
B 5 GO:0090304 nucleic acid metabolic process 24/200 1.60 8.50e-03 - no
C 5 GO:0005634 nucleus 33/200 2.11 1.43e-05 - no
C 4 GO:0005886 plasma membrane 27/200 2.18 4.63e-05 - no
C 3 GO:0016020 membrane 43/200 1.57 8.81e-04 - no
C 3 GO:0044464 cell part 112/200 1.22 1.42e-03 - no
M 3 GO:0003700 transcription factor activity 30/200 2.97 2.70e-08 - no
M 4 GO:0003677 DNA binding 34/200 2.45 3.58e-07 7.00E-21 no
M 3 GO:0003676 nucleic acid binding 47/200 1.98 1.26e-06 - no
M 3 GO:0005515 protein binding 28/200 1.79 9.44e-04 7.00E-21 no
PS 4 PO:0000230 inflorescence meristem 149/200 1.92 2.17e-25 - yes
PS 3 PO:0009013 meristem 151/200 1.88 5.47e-25 - yes
PS 4 PO:0009047 stem 145/200 1.72 8.26e-19 - yes
PS 3 PO:0009006 shoot 164/200 1.51 3.29e-17 - yes
PS 4 PO:0009049 inflorescence 160/200 1.53 8.52e-17 - yes
PS 5 PO:0009046 flower 158/200 1.52 5.75e-16 - yes
PS 3 PO:0009010 seed 151/200 1.54 3.62e-15 - yes
PS 5 PO:0008037 seedling 142/200 1.61 3.78e-15 - yes
PS 4 PO:0009001 fruit 151/200 1.54 6.33e-15 - yes
PS 3 PO:0006342 infructescence 151/200 1.54 6.33e-15 - yes
PS 4 PO:0009009 embryo 149/200 1.54 1.05e-14 - yes
PS 4 PO:0009025 leaf 144/200 1.57 2.20e-14 - yes
PS 5 PO:0000013 cauline leaf 128/200 1.66 1.07e-13 - yes
PS 5 PO:0020039 leaf lamina 132/200 1.60 4.18e-13 - yes
PS 3 PO:0006001 phyllome 150/200 1.46 1.55e-12 - yes
PS 5 PO:0009028 microsporophyll 131/200 1.56 5.14e-12 - yes
PS 3 PO:0009005 root 137/200 1.52 5.44e-12 - yes
PS 5 PO:0008034 leaf whorl 141/200 1.50 6.33e-12 - yes
PS 4 PO:0008033 phyllome whorl 141/200 1.50 6.33e-12 - yes
PS 4 PO:0000037 shoot apex 131/200 1.52 4.40e-11 - yes
PS 4 PO:0020030 cotyledon 118/200 1.61 4.56e-11 - yes
PS 3 PO:0009032 petal 132/200 1.51 7.71e-11 - yes
PS 3 PO:0009031 sepal 135/200 1.46 3.55e-10 - yes
PS 4 PO:0009026 sporophyll 132/200 1.47 6.67e-10 - yes
PS 3 PO:0020091 male gametophyte 123/200 1.48 3.59e-09 - yes
PS 5 PO:0009027 megasporophyll 124/200 1.48 3.73e-09 - yes
PS 5 PO:0009052 pedicel 118/200 1.45 5.51e-08 - yes
PS 5 PO:0020038 petiole 108/200 1.42 1.65e-06 - no
PG 3 PO:0007615 flower development stages 161/200 1.54 2.42e-17 - yes
PG 4 PO:0007600 3 floral organ development stages 158/200 1.55 4.99e-17 - yes
PG 5 PO:0007604 corolla developmental stages 152/200 1.54 2.87e-15 - yes
PG 3 PO:0007134 A vegetative growth 134/200 1.58 5.68e-13 - yes
PG 5 PO:0007133 leaf production 133/200 1.58 8.70e-13 - yes
PG 4 PO:0007112 1 main shoot growth 133/200 1.58 8.87e-13 - yes
PG 4 PO:0007631 embryo development stages 138/200 1.53 2.08e-12 - yes
PG 3 PO:0001170 seed development stages 138/200 1.53 3.08e-12 - yes
PG 4 PO:0007616 4 anthesis 143/200 1.47 1.08e-11 - yes
PG 5 PO:0001078 E expanded cotyledon stage 129/200 1.55 1.59e-11 - yes
PG 4 PO:0001054 4 leaf senescence stage 122/200 1.59 3.29e-11 - no
PG 3 PO:0001050 leaf development stages 122/200 1.59 3.44e-11 - no
PG 5 PO:0004507 D bilateral stage 126/200 1.53 1.51e-10 - yes
PG 5 PO:0001185 C globular stage 124/200 1.51 6.90e-10 - yes
PG 5 PO:0001081 F mature embryo stage 120/200 1.51 2.41e-09 - yes
KW 0 inflorescence - 11/200 9.58 2.17e-09 - no
KW 0 transcription - 38/200 2.62 1.32e-08 4.00E-10 no
KW 0 nucleus - 31/200 2.40 1.82e-06 - no
KW 0 meristem - 11/200 4.80 3.82e-06 - no
KW 0 factor - 36/200 2.06 1.06e-05 7.00E-21 no
KW 0 plasma - 27/200 2.36 1.16e-05 - no
KW 0 homeodomain - 10/200 3.97 5.16e-05 - no
KW 0 regulation - 28/200 2.12 5.69e-05 - no
KW 0 membrane - 46/200 1.73 6.11e-05 - no
KW 0 regulator - 10/200 3.42 1.90e-04 - no
KW 0 region - 26/200 1.80 1.27e-03 - yes
KW 0 stage - 32/200 1.65 1.68e-03 - no
KW 0 transmembrane - 14/200 1.93 6.56e-03 - no
KW 0 dependent - 22/200 1.64 8.03e-03 - no
KW 0 differentiation - 24/200 1.59 9.12e-03 - no
(*1) [B]:Biological process(Gene ontology), [C]:Cellular component(Gene ontology), [M]:Molecular function(Gene ontology), [PS]:Plant Structure(Plant ontology), [PG]:Growth and developmental stages(Plant ontology), [KW]:words found in gene description.
(*2) ([# of genes with the term] / [# of sampling (200)]) / ([# of genes with the term among whole genes] / [# of whole genes])
(*3) P-values were calculated on hypergeometric distribution in which we found n genes with a annotation term during 200 highly correlated genes, while we had N genes with the term in the whole genes.
(*4) PosMed is a system which serve a p-values showing a relationship between the gene and the annotation term based on literature information and Gene-Gene interaction suchas co-expression or protein-protein interactions.
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