AT2G34820.1 (↑ Click "Links", if this line appears at the beginning.)

Other supporting information

Gene Model

Correlation Plot


Expression profile (Values are plotted in Log(2) values.)

Genes with related expresssion profiles.
Positively Correlated Genes
GensPCC Definition Overlap geneDefinition Overlap gene(antisense)Definition
AT5G41730.1 0.918535 protein kinase family protein - - - -
AT1G12310.1 0.875665 calmodulin, putative OMAT1P103940 - - -
AT4G02150.1 0.83694 MOS6 (MODIFIER OF SNC1, 6) OMAT4P100810 - - -
AT2G40620.1 0.834194 bZIP transcription factor family protein OMAT2P110080 - - -
AT4G27330.1 0.820379 SPL (SPOROCYTELESS) - - - -
AT5G49070.1 0.819624 KCS21 (3-KETOACYL-COA SYNTHASE 21) - - - -
AT3G05150.1 0.805579 sugar transporter family protein OMAT3P001790 - - -
AT3G16150.1 0.796258 L-asparaginase, putative / L-asparagine amidohydrolase, putative OMAT3P005970 - - -
AT2G11290.1 0.790658 transposable element gene - - - -
AT4G02450.1 0.782528 glycine-rich protein - - - -
Negatively Correlated Genes
GensPCC Definition Overlap geneDefinition Overlap gene(antisense)Definition
AT2G26975.1 -0.788079 copper transporter, putative OMAT2P005890 - - -
AT4G16490.1 -0.765721 binding OMAT4P103935 - - -
AT3G63520.1 -0.762623 CCD1 (CAROTENOID CLEAVAGE DIOXYGENASE 1) OMAT3P018200 - - -
AT3G48320.1 -0.75835 CYP71A21 OMAT3P012580 - - -
AT1G66130.1 -0.741817 oxidoreductase N-terminal domain-containing protein OMAT1P018390 - - -
AT5G44870.1 -0.736496 disease resistance protein (TIR-NBS-LRR class), putative OMAT5P012520 - - -
AT1G52550.1 -0.734805 unknown protein - - - -
AT5G38510.1 -0.733418 rhomboid family protein OMAT5P109140,OMAT5P109150 [OMAT5P109140]-, [OMAT5P109150]- - -
AT2G04700.1 -0.733208 ferredoxin thioredoxin reductase catalytic beta chain family protein - - - -
AT1G28140.1 -0.730287 unknown protein OMAT1P108810 - - -

Get whole results

Over-Representation Analysis Result

p-value <= 1.00e-06:20 terms with high significance
1.00e-06 < p-value <= 8.76e-06 :With considering multiple testing correction;
p <= 1.00e-02 / 1142
8.76e-06 < p-value <= 1.00e-02

Type of term (*1) Depth of the term in ontology tree ID/Term Description Number of genes Over-Representative rate (*2) p-value (*3) PosMed p-value (*4)
(Link to PosMed)		 Found on gene annotation
B 5 GO:0042157 lipoprotein metabolic process 10/200 3.69 9.91e-05 - no
C 3 GO:0012505 endomembrane system 41/200 1.69 2.64e-04 - no
C 3 GO:0043228 non-membrane-bounded organelle 14/200 2.35 1.03e-03 - no
C 4 GO:0043232 intracellular non-membrane-bounded organelle 14/200 2.35 1.03e-03 - no
C 3 GO:0044464 cell part 111/200 1.21 2.24e-03 - yes
M 3 GO:0022892 substrate-specific transporter activity 12/200 2.32 2.22e-03 - no
M 3 GO:0022857 transmembrane transporter activity 12/200 2.14 4.49e-03 - no
M 4 GO:0022891 substrate-specific transmembrane transporter activity 10/200 2.27 5.06e-03 - no
M 5 GO:0016773 phosphotransferase activity, alcohol group as acceptor 12/200 1.93 9.97e-03 - no
PS 4 PO:0006345 pollen tube 67/200 2.30 4.23e-12 - no
PS 5 PO:0009046 flower 132/200 1.27 2.24e-05 - no
PS 4 PO:0009049 inflorescence 132/200 1.26 3.26e-05 - no
PS 3 PO:0009006 shoot 133/200 1.22 1.65e-04 - no
PS 5 PO:0008034 leaf whorl 115/200 1.22 1.31e-03 - no
PS 4 PO:0008033 phyllome whorl 115/200 1.22 1.31e-03 - no
PS 3 PO:0006001 phyllome 121/200 1.18 3.48e-03 - no
PS 3 PO:0009032 petal 104/200 1.19 8.21e-03 - no
PG 5 PO:0007605 androecium developmental stages 72/200 2.46 1.49e-14 - no
PG 3 PO:0007615 flower development stages 132/200 1.26 3.41e-05 - no
PG 4 PO:0007600 3 floral organ development stages 127/200 1.25 1.27e-04 - no
PG 4 PO:0007616 4 anthesis 122/200 1.26 1.41e-04 - no
PG 5 PO:0007604 corolla developmental stages 119/200 1.21 1.57e-03 - no
KW 0 anthesis - 63/200 4.79 2.17e-27 - no
KW 0 germinated - 42/200 7.59 6.97e-26 - no
KW 0 stage - 71/200 3.67 5.37e-24 - no
KW 0 mature - 48/200 5.37 7.43e-23 - no
KW 0 petal - 60/200 4.11 1.44e-22 - no
KW 0 expansion - 60/200 4.08 2.09e-22 - no
KW 0 differentiation - 60/200 3.97 8.78e-22 - no
KW 0 pollen - 44/200 4.93 1.49e-19 - no
KW 0 whorl - 23/200 9.83 2.09e-17 - no
KW 0 flower - 34/200 4.45 4.80e-14 - no
KW 0 sepal - 12/200 5.56 3.14e-07 - no
KW 0 gametophyte - 16/200 4.07 5.13e-07 - no
KW 0 globular - 14/200 3.73 6.42e-06 - no
KW 0 member - 25/200 2.28 3.99e-05 - no
KW 0 myristoylation - 10/200 3.94 5.50e-05 - no
KW 0 system - 41/200 1.69 2.49e-04 - no
KW 0 endomembrane - 39/200 1.65 5.86e-04 - no
KW 0 expanded - 11/200 2.52 1.58e-03 - no
KW 0 terminal - 31/200 1.61 3.00e-03 - no
KW 0 cotyledon - 11/200 2.09 6.98e-03 - no
KW 0 encodes - 37/200 1.45 7.61e-03 - no
KW 0 related - 40/200 1.42 7.66e-03 - no
(*1) [B]:Biological process(Gene ontology), [C]:Cellular component(Gene ontology), [M]:Molecular function(Gene ontology), [PS]:Plant Structure(Plant ontology), [PG]:Growth and developmental stages(Plant ontology), [KW]:words found in gene description.
(*2) ([# of genes with the term] / [# of sampling (200)]) / ([# of genes with the term among whole genes] / [# of whole genes])
(*3) P-values were calculated on hypergeometric distribution in which we found n genes with a annotation term during 200 highly correlated genes, while we had N genes with the term in the whole genes.
(*4) PosMed is a system which serve a p-values showing a relationship between the gene and the annotation term based on literature information and Gene-Gene interaction suchas co-expression or protein-protein interactions.
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