AT2G41430.3 (↑ Click "Links", if this line appears at the beginning.)

Other supporting information

Gene Model

Correlation Plot


Expression profile (Values are plotted in Log(2) values.)

Genes with related expresssion profiles.
Positively Correlated Genes
GensPCC Definition Overlap geneDefinition Overlap gene(antisense)Definition
AT3G50950.2 0.899265 disease resistance protein (CC-NBS-LRR class), putative OMAT3P013540 - - -
AT3G11820.1 0.874485 SYP121 (SYNTAXIN OF PLANTS 121) OMAT3P103910 - - -
AT3G57062.1 0.864159 unknown protein OMAT3P015930 - - -
AT4G01090.1 0.863971 extra-large G-protein-related OMAT4P100480 - - -
AT1G76180.1 0.860575 ERD14 (EARLY RESPONSE TO DEHYDRATION 14) OMAT1P119740 - OMAT1P022380 -
AT2G13790.1 0.860246 SERK4 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 4) OMAT2P001690 - - -
AT5G52750.1 0.853272 heavy-metal-associated domain-containing protein OMAT5P015300 - - -
AT1G53210.1 0.85288 sodium/calcium exchanger family protein / calcium-binding EF hand family protein OMAT1P014680 - - -
AT3G61210.1 0.849936 embryo-abundant protein-related OMAT3P115160 - - -
AT5G54110.1 0.847774 ATMAMI (ARABIDOPSIS THALIANA MEMBRANE-ASSOCIATED MANNITOL-INDUCED) - - - -
Negatively Correlated Genes
GensPCC Definition Overlap geneDefinition Overlap gene(antisense)Definition
AT5G20790.1 -0.869447 unknown protein OMAT5P106190 - OMAT5P007210 -
AT3G44264.1 -0.869015 transposable element gene - - - -
AT3G28153.1 -0.867281 transposable element gene OMAT3P109230 - - -
AT4G10750.1 -0.864801 HpcH/HpaI aldolase family protein OMAT4P002630 - - -
AT4G09565.1 -0.856854 transposable element gene - - - -
AT4G03873.1 -0.854848 transposable element gene - - - -
AT1G44045.1 -0.841921 transposable element gene - - - -
AT5G05810.1 -0.841435 ATL43 - - - -
AT3G08640.1 -0.840994 alphavirus core protein family OMAT3P002970 - - -
AT5G64400.2 -0.837649 unknown protein OMAT5P019825 - - -

Get whole results

Over-Representation Analysis Result

p-value <= 5.84e-32:20 terms with high significance
5.84e-32 < p-value <= 8.76e-06 :With considering multiple testing correction;
p <= 1.00e-02 / 1142
8.76e-06 < p-value <= 1.00e-02

Type of term (*1) Depth of the term in ontology tree ID/Term Description Number of genes Over-Representative rate (*2) p-value (*3) PosMed p-value (*4)
(Link to PosMed)		 Found on gene annotation
B 3 GO:0006950 response to stress 43/200 3.47 1.35e-13 2.13E-16 yes
B 4 GO:0006952 defense response 25/200 5.49 9.33e-13 - no
B 3 GO:0008219 cell death 15/200 10.35 1.82e-12 9.20E-10 no
B 4 GO:0012501 programmed cell death 13/200 10.39 3.84e-11 - no
B 3 GO:0006955 immune response 15/200 7.92 1.01e-10 - no
B 4 GO:0045087 innate immune response 14/200 7.89 3.91e-10 - no
B 5 GO:0006915 apoptosis 10/200 11.71 1.13e-09 9.20E-10 no
B 4 GO:0010033 response to organic substance 25/200 3.74 3.79e-09 - no
B 4 GO:0009620 response to fungus 10/200 10.08 5.55e-09 - no
B 3 GO:0051707 response to other organism 17/200 5.07 9.15e-09 - yes
B 3 GO:0042221 response to chemical stimulus 33/200 2.89 1.06e-08 1.17E-09 yes
B 3 GO:0009607 response to biotic stimulus 17/200 4.70 2.92e-08 - yes
B 5 GO:0006796 phosphate metabolic process 21/200 3.16 9.80e-07 - no
B 4 GO:0006793 phosphorus metabolic process 21/200 3.16 9.94e-07 - no
B 4 GO:0007165 signal transduction 13/200 4.52 1.38e-06 6.36E-16 no
B 3 GO:0023046 signaling process 13/200 4.01 5.51e-06 1.17E-09 no
B 3 GO:0023060 signal transmission 13/200 4.01 5.51e-06 - no
B 3 GO:0009719 response to endogenous stimulus 16/200 3.10 1.88e-05 1.17E-09 no
B 4 GO:0009725 response to hormone stimulus 15/200 3.17 2.45e-05 - no
B 3 GO:0051641 cellular localization 11/200 3.74 4.52e-05 - no
B 5 GO:0006464 protein modification process 24/200 2.31 4.68e-05 - no
B 3 GO:0050789 regulation of biological process 34/200 1.97 4.74e-05 - no
B 3 GO:0050794 regulation of cellular process 31/200 2.03 5.34e-05 - no
B 3 GO:0023033 signaling pathway 11/200 3.25 1.67e-04 2.02E-16 no
B 4 GO:0043412 macromolecule modification 24/200 2.12 1.80e-04 - no
B 3 GO:0009628 response to abiotic stimulus 16/200 2.16 1.32e-03 - yes
B 3 GO:0006810 transport 20/200 1.95 1.51e-03 9.20E-10 no
B 3 GO:0051234 establishment of localization 20/200 1.95 1.56e-03 - no
B 3 GO:0051716 cellular response to stimulus 10/200 2.26 5.16e-03 - no
B 5 GO:0044267 cellular protein metabolic process 31/200 1.52 6.93e-03 - no
B 3 GO:0009056 catabolic process 10/200 2.10 8.89e-03 - no
C 3 GO:0016020 membrane 65/200 2.37 2.42e-12 1.96E-15 no
C 4 GO:0005886 plasma membrane 37/200 2.99 5.63e-10 9.20E-10 no
C 3 GO:0044464 cell part 122/200 1.33 5.16e-06 2.86E-16 yes
C 4 GO:0044444 cytoplasmic part 56/200 1.61 6.33e-05 1.17E-09 no
C 3 GO:0044424 intracellular part 74/200 1.45 1.13e-04 - yes
C 4 GO:0005737 cytoplasm 58/200 1.55 1.44e-04 9.20E-10 yes
C 4 GO:0043231 intracellular membrane-bounded organelle 65/200 1.48 2.04e-04 - no
C 3 GO:0043227 membrane-bounded organelle 65/200 1.48 2.05e-04 - no
C 4 GO:0031224 intrinsic to membrane 14/200 2.61 3.53e-04 - no
C 3 GO:0044425 membrane part 18/200 2.28 3.97e-04 9.16E-17 no
C 3 GO:0005622 intracellular 74/200 1.39 4.71e-04 9.20E-10 yes
C 3 GO:0043229 intracellular organelle 65/200 1.41 8.62e-04 - no
C 5 GO:0009536 plastid 31/200 1.68 1.54e-03 1.17E-09 no
M 5 GO:0032555 purine ribonucleotide binding 32/200 3.26 9.58e-10 - no
M 4 GO:0032553 ribonucleotide binding 32/200 3.26 9.58e-10 - no
M 5 GO:0030554 adenyl nucleotide binding 30/200 3.32 2.11e-09 - no
M 4 GO:0001883 purine nucleoside binding 30/200 3.32 2.11e-09 - no
M 3 GO:0001882 nucleoside binding 30/200 3.31 2.24e-09 - no
M 4 GO:0017076 purine nucleotide binding 32/200 3.08 3.84e-09 - no
M 3 GO:0004871 signal transducer activity 14/200 6.22 9.81e-09 - no
M 5 GO:0016301 kinase activity 27/200 3.36 1.00e-08 9.20E-10 no
M 4 GO:0016772 transferase activity, transferring phosphorus-containing groups 29/200 3.16 1.14e-08 - no
M 4 GO:0004872 receptor activity 10/200 8.53 3.14e-08 - no
M 5 GO:0016773 phosphotransferase activity, alcohol group as acceptor 22/200 3.54 7.66e-08 - no
M 3 GO:0000166 nucleotide binding 34/200 2.57 1.15e-07 - no
M 3 GO:0005515 protein binding 36/200 2.30 7.90e-07 2.00E-20 yes
M 3 GO:0016740 transferase activity 37/200 2.26 8.32e-07 - no
M 5 GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 11/200 2.47 1.85e-03 - no
M 4 GO:0016817 hydrolase activity, acting on acid anhydrides 11/200 2.45 2.00e-03 - no
M 5 GO:0046872 metal ion binding 22/200 1.62 9.34e-03 - no
PS 4 PO:0020030 cotyledon 169/200 2.30 2.82e-45 1.17E-09 yes
PS 5 PO:0020038 petiole 170/200 2.23 7.62e-44 - yes
PS 4 PO:0000230 inflorescence meristem 171/200 2.20 1.87e-43 - yes
PS 5 PO:0020039 leaf lamina 174/200 2.11 2.16e-42 - yes
PS 3 PO:0009013 meristem 172/200 2.14 3.68e-42 9.20E-10 yes
PS 5 PO:0009028 microsporophyll 173/200 2.06 3.14e-40 - yes
PS 5 PO:0000013 cauline leaf 167/200 2.16 5.10e-40 - yes
PS 4 PO:0009047 stem 173/200 2.05 8.04e-40 4.71E-16 yes
PS 4 PO:0009025 leaf 177/200 1.92 9.10e-38 4.19E-17 yes
PS 5 PO:0008037 seedling 173/200 1.96 9.21e-37 1.17E-09 yes
PS 4 PO:0009026 sporophyll 174/200 1.93 2.23e-36 - yes
PS 4 PO:0000037 shoot apex 170/200 1.98 1.01e-35 - yes
PS 5 PO:0008034 leaf whorl 174/200 1.85 3.05e-33 - yes
PS 4 PO:0008033 phyllome whorl 174/200 1.85 3.05e-33 - yes
PS 3 PO:0009032 petal 167/200 1.91 5.84e-32 - yes
PS 4 PO:0009009 embryo 174/200 1.80 1.27e-31 9.20E-10 yes
PS 4 PO:0009001 fruit 175/200 1.78 2.53e-31 - yes
PS 3 PO:0006342 infructescence 175/200 1.78 2.53e-31 - yes
PS 3 PO:0009010 seed 174/200 1.78 8.46e-31 3.72E-17 yes
PS 3 PO:0006001 phyllome 177/200 1.73 2.90e-30 - yes
PS 5 PO:0009027 megasporophyll 161/200 1.92 9.03e-30 - yes
PS 3 PO:0009031 sepal 168/200 1.82 1.71e-29 - yes
PS 5 PO:0009046 flower 175/200 1.68 1.36e-27 9.20E-10 yes
PS 3 PO:0020091 male gametophyte 157/200 1.89 1.77e-27 - yes
PS 3 PO:0009005 root 163/200 1.81 3.36e-27 1.43E-16 yes
PS 4 PO:0009049 inflorescence 175/200 1.67 3.37e-27 - yes
PS 3 PO:0009006 shoot 177/200 1.63 1.96e-26 9.20E-10 yes
PS 5 PO:0009052 pedicel 152/200 1.87 4.87e-25 - yes
PS 4 PO:0006345 pollen tube 50/200 1.72 3.36e-05 - no
PS 3 PO:0000084 sperm cell 49/200 1.51 9.30e-04 - no
PS 3 PO:0020097 generative cell 49/200 1.51 9.30e-04 - no
PS 3 PO:0004013 epidermal cell 21/200 1.76 4.21e-03 9.20E-10 no
PS 4 PO:0005679 epidermis 21/200 1.70 6.49e-03 9.20E-10 no
PS 3 PO:0009014 dermal tissue 21/200 1.70 6.53e-03 - no
PS 5 PO:0006016 leaf epidermis 19/200 1.71 8.22e-03 9.20E-10 no
PS 5 PO:0006035 shoot epidermis 19/200 1.70 8.84e-03 - no
PG 5 PO:0007133 leaf production 173/200 2.06 5.14e-40 9.20E-10 yes
PG 4 PO:0007112 1 main shoot growth 173/200 2.06 5.32e-40 - yes
PG 3 PO:0007134 A vegetative growth 173/200 2.04 1.55e-39 9.20E-10 yes
PG 4 PO:0001054 4 leaf senescence stage 166/200 2.16 2.20e-39 - yes
PG 3 PO:0001050 leaf development stages 166/200 2.16 2.39e-39 - yes
PG 4 PO:0007616 4 anthesis 173/200 1.78 1.60e-30 - yes
PG 5 PO:0004507 D bilateral stage 159/200 1.93 2.36e-29 - yes
PG 3 PO:0001170 seed development stages 165/200 1.82 2.03e-28 - yes
PG 4 PO:0007600 3 floral organ development stages 174/200 1.71 3.94e-28 - yes
PG 5 PO:0001185 C globular stage 157/200 1.91 4.44e-28 - yes
PG 3 PO:0007615 flower development stages 176/200 1.68 5.53e-28 - yes
PG 4 PO:0007631 embryo development stages 164/200 1.82 6.53e-28 - yes
PG 5 PO:0007604 corolla developmental stages 171/200 1.73 1.02e-27 - yes
PG 5 PO:0001078 E expanded cotyledon stage 155/200 1.87 5.32e-26 - yes
PG 5 PO:0001081 F mature embryo stage 150/200 1.89 7.77e-25 - yes
PG 5 PO:0007605 androecium developmental stages 46/200 1.57 5.72e-04 - no
KW 0 ipr002182 - 14/200 14.73 4.96e-14 - no
KW 0 response - 52/200 2.90 3.61e-13 3.49E-15 yes
KW 0 membrane - 65/200 2.44 6.52e-13 1.96E-15 no
KW 0 disease - 16/200 9.14 2.82e-12 5.48E-15 no
KW 0 plasma - 37/200 3.23 6.18e-11 9.20E-10 no
KW 0 resistance - 18/200 6.33 9.45e-11 1.11E-15 no
KW 0 defense - 19/200 5.45 4.31e-10 1.26E-16 no
KW 0 transmembrane - 27/200 3.72 1.07e-09 - no
KW 0 apoptosis - 10/200 11.16 1.89e-09 9.20E-10 no
KW 0 phosphorylation - 22/200 3.58 6.44e-08 9.20E-10 no
KW 0 ipr000719 - 22/200 3.53 8.21e-08 - no
KW 0 leucine - 20/200 3.81 8.32e-08 1.17E-09 no
KW 0 ipr008271 - 19/200 3.89 1.18e-07 - no
KW 0 ipr011009 - 22/200 3.40 1.58e-07 - no
KW 0 ipr001611 - 14/200 4.95 1.94e-07 - no
KW 0 threonine - 23/200 3.07 5.64e-07 - no
KW 0 kinase - 28/200 2.65 7.93e-07 9.20E-10 no
KW 0 serine - 25/200 2.80 1.05e-06 1.17E-09 no
KW 0 ipr001245 - 12/200 4.71 2.01e-06 - no
KW 0 atpase - 14/200 3.97 3.02e-06 9.20E-10 no
KW 0 tyrosine - 14/200 3.95 3.28e-06 1.17E-09 no
KW 0 stress - 16/200 3.41 5.60e-06 0 yes
KW 0 amino - 23/200 2.67 6.12e-06 1.80E-15 no
KW 0 ipr003593 - 10/200 4.99 6.22e-06 - no
KW 0 receptor - 16/200 3.36 6.73e-06 9.20E-10 no
KW 0 transduction - 13/200 3.93 6.92e-06 6.98E-16 no
KW 0 ipr017441 - 15/200 3.49 7.56e-06 - no
KW 0 ipr017442 - 16/200 3.04 2.48e-05 - no
KW 0 stimulus - 14/200 3.25 3.19e-05 1.17E-09 no
KW 0 class - 17/200 2.84 3.62e-05 5.06E-16 no
KW 0 signal - 14/200 3.19 3.97e-05 1.02E-15 no
KW 0 ipr002290 - 11/200 3.73 4.61e-05 - no
KW 0 active - 20/200 2.44 7.90e-05 9.20E-10 no
KW 0 calcium - 10/200 3.75 8.46e-05 1.17E-09 no
KW 0 induced - 10/200 3.65 1.07e-04 0 no
KW 0 putative - 40/200 1.73 1.80e-04 9.20E-10 no
KW 0 nucleotide - 16/200 2.51 2.43e-04 9.20E-10 no
KW 0 signaling - 11/200 2.95 4.00e-04 7.06E-16 no
KW 0 repeat - 25/200 1.93 5.79e-04 1.17E-09 no
KW 0 chloroplast - 31/200 1.76 7.37e-04 - no
KW 0 subunit - 15/200 2.05 3.00e-03 1.17E-09 no
KW 0 transporter - 14/200 2.01 4.46e-03 - no
KW 0 conserved - 23/200 1.70 4.63e-03 3.05E-16 no
KW 0 dependent - 22/200 1.64 8.03e-03 2.39E-15 no
(*1) [B]:Biological process(Gene ontology), [C]:Cellular component(Gene ontology), [M]:Molecular function(Gene ontology), [PS]:Plant Structure(Plant ontology), [PG]:Growth and developmental stages(Plant ontology), [KW]:words found in gene description.
(*2) ([# of genes with the term] / [# of sampling (200)]) / ([# of genes with the term among whole genes] / [# of whole genes])
(*3) P-values were calculated on hypergeometric distribution in which we found n genes with a annotation term during 200 highly correlated genes, while we had N genes with the term in the whole genes.
(*4) PosMed is a system which serve a p-values showing a relationship between the gene and the annotation term based on literature information and Gene-Gene interaction suchas co-expression or protein-protein interactions.
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