AT3G12690.2 (↑ Click "Links", if this line appears at the beginning.)

Other supporting information

Gene Model

Correlation Plot


Expression profile (Values are plotted in Log(2) values.)

Genes with related expresssion profiles.
Positively Correlated Genes
GensPCC Definition Overlap geneDefinition Overlap gene(antisense)Definition
AT1G13890.1 0.963165 SNAP30 (SOLUBLE N-ETHYLMALEIMIDE-SENSITIVE FACTOR ADAPTOR PROTEIN 30) - - - -
AT1G23660.1 0.959028 unknown protein - - - -
AT1G70790.2 0.957103 C2 domain-containing protein OMAT1P020210 - - -
AT5G26717.1 0.956882 Encodes a Plant thionin family protein - - - -
AT1G59640.2 0.955372 ZCW32 OMAT1P114440 - - -
AT1G24520.1 0.954486 BCP1 OMAT1P009010 - - -
AT4G18395.1 0.95409 unknown protein OMAT4P005560 - - -
AT5G61680.1 0.953925 pectinesterase family protein OMAT5P116610 - - -
AT3G01700.1 0.953862 AGP11 OMAT3P000367 - - -
AT2G17950.1 0.953748 WUS (WUSCHEL) OMAT2P102430 - - -
Negatively Correlated Genes
GensPCC Definition Overlap geneDefinition Overlap gene(antisense)Definition
AT1G41910.1 -0.663882 transposable element gene - - - -
AT4G04590.1 -0.662379 transposable element gene - - - -
AT5G54700.1 -0.660152 ankyrin repeat family protein - - - -
AT1G43502.1 -0.634024 transposable element gene - - - -
AT5G28287.1 -0.632115 pseudogene, hypothetical protein - - - -
AT4G06654.1 -0.623304 transposable element gene - - - -
AT1G50190.1 -0.616674 FUNCTIONS IN: molecular_function unknown - - - -
AT5G56830.1 -0.610349 transposable element gene - - - -
AT4G04440.1 -0.588874 transposable element gene - - - -
AT4G11390.1 -0.586487 DC1 domain-containing protein - - - -

Get whole results

Over-Representation Analysis Result

p-value <= 2.18e-16:20 terms with high significance
2.18e-16 < p-value <= 8.76e-06 :With considering multiple testing correction;
p <= 1.00e-02 / 1142
8.76e-06 < p-value <= 1.00e-02

Type of term (*1) Depth of the term in ontology tree ID/Term Description Number of genes Over-Representative rate (*2) p-value (*3) PosMed p-value (*4)
(Link to PosMed)		 Found on gene annotation
B 3 GO:0007154 cell communication 12/200 6.46 5.60e-08 - no
B 5 GO:0006464 protein modification process 25/200 2.40 1.68e-05 - no
B 3 GO:0048869 cellular developmental process 11/200 3.96 2.61e-05 - yes
B 4 GO:0043412 macromolecule modification 25/200 2.20 7.05e-05 - no
B 5 GO:0042157 lipoprotein metabolic process 10/200 3.69 9.91e-05 - no
B 5 GO:0006796 phosphate metabolic process 17/200 2.56 1.33e-04 - no
B 4 GO:0006793 phosphorus metabolic process 17/200 2.56 1.35e-04 - no
B 4 GO:0005975 carbohydrate metabolic process 11/200 2.11 6.45e-03 - no
C 3 GO:0012505 endomembrane system 80/200 3.29 2.76e-24 - no
C 3 GO:0044464 cell part 138/200 1.51 8.64e-12 - yes
C 3 GO:0048046 apoplast 11/200 5.58 8.11e-07 - no
C 4 GO:0031224 intrinsic to membrane 18/200 3.36 2.15e-06 - no
C 3 GO:0044425 membrane part 21/200 2.66 1.58e-05 - no
C 4 GO:0005618 cell wall 10/200 3.01 5.55e-04 - no
C 3 GO:0030312 external encapsulating structure 10/200 2.99 5.89e-04 - no
M 3 GO:0004857 enzyme inhibitor activity 15/200 14.33 1.15e-14 - no
M 5 GO:0004091 carboxylesterase activity 19/200 9.49 1.84e-14 - no
M 4 GO:0016788 hydrolase activity, acting on ester bonds 24/200 4.04 1.60e-09 - no
M 3 GO:0016787 hydrolase activity 37/200 2.37 2.67e-07 - no
M 5 GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds 10/200 4.04 4.43e-05 - no
M 5 GO:0016773 phosphotransferase activity, alcohol group as acceptor 17/200 2.74 5.71e-05 - no
M 4 GO:0016798 hydrolase activity, acting on glycosyl bonds 10/200 3.76 8.30e-05 - no
M 5 GO:0016301 kinase activity 19/200 2.36 1.79e-04 - yes
M 4 GO:0016772 transferase activity, transferring phosphorus-containing groups 19/200 2.07 9.35e-04 - yes
M 5 GO:0030554 adenyl nucleotide binding 16/200 1.77 9.66e-03 - no
M 4 GO:0001883 purine nucleoside binding 16/200 1.77 9.66e-03 - no
M 3 GO:0001882 nucleoside binding 16/200 1.76 9.90e-03 - no
PS 4 PO:0006345 pollen tube 136/200 4.67 2.47e-67 - yes
PS 3 PO:0020091 male gametophyte 148/200 1.78 2.00e-21 - yes
PS 3 PO:0009031 sepal 145/200 1.57 1.09e-14 - yes
PS 5 PO:0009046 flower 151/200 1.45 2.25e-12 - yes
PS 4 PO:0009049 inflorescence 151/200 1.44 4.14e-12 - yes
PS 3 PO:0009032 petal 132/200 1.51 7.71e-11 - yes
PS 3 PO:0009006 shoot 151/200 1.39 1.55e-10 - yes
PS 5 PO:0008034 leaf whorl 134/200 1.42 4.61e-09 - yes
PS 4 PO:0008033 phyllome whorl 134/200 1.42 4.61e-09 - yes
PS 3 PO:0006001 phyllome 139/200 1.36 5.21e-08 - yes
PS 5 PO:0009027 megasporophyll 120/200 1.43 9.55e-08 - yes
PS 5 PO:0009028 microsporophyll 118/200 1.41 3.96e-07 - yes
PS 4 PO:0009026 sporophyll 122/200 1.36 1.90e-06 - yes
PS 4 PO:0009001 fruit 118/200 1.20 2.09e-03 - yes
PS 3 PO:0006342 infructescence 118/200 1.20 2.09e-03 - yes
PS 4 PO:0009009 embryo 116/200 1.20 2.38e-03 - yes
PS 3 PO:0009010 seed 117/200 1.20 2.60e-03 - yes
PG 5 PO:0007605 androecium developmental stages 134/200 4.58 7.69e-65 - yes
PG 4 PO:0007600 3 floral organ development stages 152/200 1.49 8.43e-14 - yes
PG 3 PO:0007615 flower development stages 152/200 1.45 1.51e-12 - yes
PG 4 PO:0007616 4 anthesis 141/200 1.45 7.91e-11 - yes
PG 5 PO:0007604 corolla developmental stages 137/200 1.39 1.34e-08 - yes
PG 5 PO:0001185 C globular stage 114/200 1.39 1.83e-06 - yes
PG 4 PO:0007631 embryo development stages 117/200 1.30 4.79e-05 - yes
PG 3 PO:0001170 seed development stages 117/200 1.29 6.02e-05 - yes
KW 0 germinated - 113/200 20.42 3.05e-124 - no
KW 0 pollen - 124/200 13.89 6.87e-117 - yes
KW 0 globular - 91/200 24.25 1.15e-104 - no
KW 0 mature - 114/200 12.75 2.26e-101 - no
KW 0 anthesis - 118/200 8.98 1.27e-87 - no
KW 0 stage - 129/200 6.66 1.51e-81 - no
KW 0 petal - 115/200 7.88 1.65e-78 - no
KW 0 expansion - 114/200 7.76 6.80e-77 - no
KW 0 differentiation - 115/200 7.61 8.93e-77 - no
KW 0 pectin - 26/200 17.16 8.40e-26 - no
KW 0 endomembrane - 80/200 3.38 4.55e-25 - no
KW 0 system - 80/200 3.30 2.30e-24 - no
KW 0 pectinesterase - 19/200 20.25 5.99e-21 - no
KW 0 ipr012334 - 16/200 16.73 1.29e-16 - no
KW 0 ipr011050 - 16/200 16.42 1.77e-16 - no
KW 0 virulence - 16/200 16.22 2.18e-16 - no
KW 0 ipr006501 - 14/200 18.93 1.14e-15 - no
KW 0 lyase - 16/200 8.06 2.07e-11 - no
KW 0 inhibitor - 19/200 6.36 2.86e-11 - no
KW 0 sepal - 14/200 6.48 5.68e-09 - no
KW 0 gametophyte - 17/200 4.33 1.01e-07 - no
KW 0 apoplast - 11/200 6.56 1.45e-07 - no
KW 0 peptide - 10/200 6.65 3.87e-07 - no
KW 0 active - 24/200 2.93 7.55e-07 - yes
KW 0 terminal - 40/200 2.08 2.70e-06 - no
KW 0 enzyme - 13/200 3.85 8.65e-06 - no
KW 0 lipid - 13/200 3.79 1.05e-05 - no
KW 0 carbohydrate - 14/200 3.57 1.08e-05 - no
KW 0 signaling - 13/200 3.49 2.57e-05 - no
KW 0 serine - 22/200 2.47 3.24e-05 9.00E-20 yes
KW 0 phosphorylation - 17/200 2.77 5.04e-05 - no
KW 0 myristoylation - 10/200 3.94 5.50e-05 - no
KW 0 ipr000719 - 17/200 2.73 6.00e-05 - yes
KW 0 threonine - 19/200 2.53 6.99e-05 9.00E-20 yes
KW 0 glycoside - 10/200 3.80 7.66e-05 - no
KW 0 ipr011009 - 17/200 2.63 9.56e-05 - yes
KW 0 ipr017441 - 13/200 3.03 1.18e-04 - no
KW 0 factor - 33/200 1.88 1.36e-04 - no
KW 0 catalytic - 22/200 2.16 2.28e-04 - no
KW 0 flower - 18/200 2.36 2.58e-04 - no
KW 0 amino - 19/200 2.21 4.29e-04 - no
KW 0 ipr008271 - 13/200 2.66 4.34e-04 - yes
KW 0 ipr017442 - 13/200 2.47 9.06e-04 - yes
KW 0 sequence - 10/200 2.63 1.65e-03 - no
KW 0 kinase - 20/200 1.89 2.15e-03 0 yes
KW 0 signal - 10/200 2.28 4.91e-03 - no
KW 0 conserved - 22/200 1.63 9.07e-03 - no
(*1) [B]:Biological process(Gene ontology), [C]:Cellular component(Gene ontology), [M]:Molecular function(Gene ontology), [PS]:Plant Structure(Plant ontology), [PG]:Growth and developmental stages(Plant ontology), [KW]:words found in gene description.
(*2) ([# of genes with the term] / [# of sampling (200)]) / ([# of genes with the term among whole genes] / [# of whole genes])
(*3) P-values were calculated on hypergeometric distribution in which we found n genes with a annotation term during 200 highly correlated genes, while we had N genes with the term in the whole genes.
(*4) PosMed is a system which serve a p-values showing a relationship between the gene and the annotation term based on literature information and Gene-Gene interaction suchas co-expression or protein-protein interactions.
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