AT4G33270.1 (↑ Click "Links", if this line appears at the beginning.)

Other supporting information

Gene Model

Correlation Plot


Expression profile (Values are plotted in Log(2) values.)

Genes with related expresssion profiles.
Positively Correlated Genes
GensPCC Definition Overlap geneDefinition Overlap gene(antisense)Definition
AT5G66230.1 0.977597 unknown protein OMAT5P020550 - - -
AT1G18370.1 0.977474 HIK (HINKEL) OMAT1P105920 - - -
AT3G51280.1 0.976137 male sterility MS5, putative OMAT3P013690 - - -
AT3G15550.1 0.973265 unknown protein OMAT3P005720 - - -
AT1G05440.1 0.969039 unknown protein OMAT1P101470 - - -
AT4G32830.1 0.968932 AtAUR1 (ATAURORA1) OMAT4P011040 - - -
AT4G01730.1 0.966872 zinc ion binding OMAT4P000620 - - -
AT5G56120.1 0.96654 unknown protein OMAT5P016640 - - -
AT4G23800.1 0.964526 high mobility group (HMG1/2) family protein OMAT4P007260 - - -
AT5G03870.1 0.962896 glutaredoxin family protein OMAT5P100920 - - -
Negatively Correlated Genes
GensPCC Definition Overlap geneDefinition Overlap gene(antisense)Definition
AT4G10860.1 -0.751045 unknown protein - - - -
AT3G66654.1 -0.696385 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein OMAT3P002350 - - -
AT1G21065.1 -0.684724 unknown protein - - - -
AT2G04720.1 -0.684518 pseudogene, GTP-binding protein -related, similar to GTP-binding protein GI:6624302 from (Carica papaya) - - - -
AT4G06509.1 -0.680399 transposable element gene - - - -
AT1G22720.1 -0.674446 wall-associated kinase, putative - - - -
AT4G12300.1 -0.668281 CYP706A4 OMAT4P102490 - - -
AT4G21790.1 -0.658361 TOM1 (TOBAMOVIRUS MULTIPLICATION 1) OMAT4P006660 - - -
AT3G56190.1 -0.658224 ALPHA-SNAP2 (ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN 2) OMAT3P113720 - - -
AT3G29450.1 -0.655845 FUNCTIONS IN: molecular_function unknown - - - -

Get whole results

Over-Representation Analysis Result

p-value <= 5.21e-24:20 terms with high significance
5.21e-24 < p-value <= 8.76e-06 :With considering multiple testing correction;
p <= 1.00e-02 / 1142
8.76e-06 < p-value <= 1.00e-02

Type of term (*1) Depth of the term in ontology tree ID/Term Description Number of genes Over-Representative rate (*2) p-value (*3) PosMed p-value (*4)
(Link to PosMed)		 Found on gene annotation
B 3 GO:0007049 cell cycle 23/200 14.82 1.47e-21 3.00E-92 no
B 3 GO:0007017 microtubule-based process 17/200 26.42 3.53e-21 - no
B 3 GO:0022402 cell cycle process 14/200 15.31 2.79e-14 - no
B 4 GO:0051726 regulation of cell cycle 12/200 17.82 1.83e-13 - no
B 4 GO:0022403 cell cycle phase 10/200 16.63 2.51e-11 - no
B 5 GO:0007167 enzyme linked receptor protein signaling pathway 10/200 12.79 4.40e-10 - no
B 4 GO:0007166 cell surface receptor linked signaling pathway 10/200 11.01 2.18e-09 - no
B 3 GO:0006996 organelle organization 14/200 4.19 1.55e-06 - no
B 3 GO:0023033 signaling pathway 14/200 4.14 1.81e-06 - no
B 3 GO:0048856 anatomical structure development 18/200 2.01 1.70e-03 - no
B 5 GO:0006796 phosphate metabolic process 14/200 2.11 2.92e-03 - no
B 4 GO:0006793 phosphorus metabolic process 14/200 2.11 2.95e-03 - no
B 3 GO:0007275 multicellular organismal development 19/200 1.79 5.05e-03 - no
B 3 GO:0050794 regulation of cellular process 25/200 1.64 5.39e-03 - yes
C 5 GO:0005856 cytoskeleton 22/200 19.56 1.64e-23 - no
C 4 GO:0044430 cytoskeletal part 20/200 21.18 2.43e-22 - no
C 3 GO:0043228 non-membrane-bounded organelle 30/200 5.03 5.87e-14 - no
C 4 GO:0043232 intracellular non-membrane-bounded organelle 30/200 5.03 5.87e-14 - no
C 3 GO:0044464 cell part 135/200 1.48 1.61e-10 - yes
C 3 GO:0043234 protein complex 24/200 3.67 1.09e-08 - yes
C 3 GO:0044424 intracellular part 81/200 1.59 1.09e-06 - no
C 3 GO:0005622 intracellular 83/200 1.56 1.67e-06 - no
C 3 GO:0043229 intracellular organelle 74/200 1.60 3.09e-06 - no
C 3 GO:0044446 intracellular organelle part 29/200 2.02 9.81e-05 - no
C 3 GO:0044422 organelle part 29/200 2.02 9.96e-05 - no
C 5 GO:0005634 nucleus 29/200 1.85 4.35e-04 - no
C 4 GO:0043231 intracellular membrane-bounded organelle 59/200 1.34 4.87e-03 - no
C 3 GO:0043227 membrane-bounded organelle 59/200 1.34 4.88e-03 - no
C 4 GO:0005886 plasma membrane 21/200 1.70 6.53e-03 - yes
M 5 GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 24/200 5.39 3.78e-12 - no
M 4 GO:0016817 hydrolase activity, acting on acid anhydrides 24/200 5.34 4.63e-12 - no
M 4 GO:0017076 purine nucleotide binding 35/200 3.37 6.22e-11 - no
M 5 GO:0030554 adenyl nucleotide binding 32/200 3.54 1.20e-10 - no
M 4 GO:0001883 purine nucleoside binding 32/200 3.54 1.20e-10 - no
M 3 GO:0001882 nucleoside binding 32/200 3.53 1.29e-10 - no
M 5 GO:0032555 purine ribonucleotide binding 33/200 3.36 2.37e-10 - no
M 4 GO:0032553 ribonucleotide binding 33/200 3.36 2.37e-10 - no
M 3 GO:0016787 hydrolase activity 42/200 2.69 9.37e-10 - no
M 3 GO:0000166 nucleotide binding 37/200 2.80 3.30e-09 1.00E-13 no
M 5 GO:0016773 phosphotransferase activity, alcohol group as acceptor 16/200 2.58 1.82e-04 - no
M 5 GO:0016301 kinase activity 16/200 1.99 3.12e-03 - no
M 3 GO:0016740 transferase activity 27/200 1.65 3.63e-03 - no
M 4 GO:0016772 transferase activity, transferring phosphorus-containing groups 17/200 1.85 5.10e-03 - no
PS 5 PO:0008034 leaf whorl 169/200 1.79 5.29e-29 - no
PS 4 PO:0008033 phyllome whorl 169/200 1.79 5.29e-29 - no
PS 5 PO:0009052 pedicel 156/200 1.92 7.37e-28 - no
PS 3 PO:0009031 sepal 165/200 1.79 3.76e-27 - no
PS 3 PO:0006001 phyllome 173/200 1.69 6.82e-27 - no
PS 3 PO:0009032 petal 160/200 1.83 1.60e-26 - no
PS 4 PO:0000037 shoot apex 157/200 1.82 2.02e-25 - no
PS 4 PO:0009009 embryo 165/200 1.71 1.77e-24 - no
PS 4 PO:0009049 inflorescence 171/200 1.63 4.68e-24 - no
PS 3 PO:0009006 shoot 174/200 1.60 4.95e-24 - no
PS 3 PO:0009010 seed 165/200 1.69 9.51e-24 - no
PS 5 PO:0009046 flower 170/200 1.63 1.11e-23 - no
PS 4 PO:0009001 fruit 165/200 1.68 1.92e-23 - no
PS 3 PO:0006342 infructescence 165/200 1.68 1.92e-23 - no
PS 4 PO:0009025 leaf 156/200 1.70 3.74e-21 - no
PS 3 PO:0009005 root 146/200 1.62 2.24e-16 - no
PS 5 PO:0020038 petiole 126/200 1.66 2.60e-13 - no
PS 5 PO:0020039 leaf lamina 132/200 1.60 4.18e-13 - no
PS 5 PO:0008037 seedling 134/200 1.52 2.03e-11 - no
PS 5 PO:0000013 cauline leaf 120/200 1.55 2.94e-10 - no
PS 5 PO:0009027 megasporophyll 116/200 1.38 1.76e-06 - no
PS 3 PO:0000084 sperm cell 58/200 1.79 1.82e-06 - no
PS 3 PO:0020097 generative cell 58/200 1.79 1.82e-06 - no
PS 3 PO:0020091 male gametophyte 113/200 1.36 6.51e-06 - no
PS 4 PO:0009026 sporophyll 120/200 1.33 7.24e-06 - no
PS 3 PO:0009013 meristem 99/200 1.23 3.00e-03 - no
PG 5 PO:0001081 F mature embryo stage 157/200 1.97 7.66e-30 - no
PG 4 PO:0007631 embryo development stages 163/200 1.81 3.71e-27 - no
PG 3 PO:0001170 seed development stages 163/200 1.80 6.68e-27 - no
PG 5 PO:0001078 E expanded cotyledon stage 156/200 1.88 1.04e-26 - no
PG 5 PO:0004507 D bilateral stage 155/200 1.88 2.03e-26 - no
PG 5 PO:0007604 corolla developmental stages 169/200 1.71 3.75e-26 - no
PG 4 PO:0007616 4 anthesis 167/200 1.72 9.90e-26 - no
PG 4 PO:0007600 3 floral organ development stages 171/200 1.68 9.90e-26 - no
PG 3 PO:0007615 flower development stages 171/200 1.63 5.21e-24 - no
PG 5 PO:0001185 C globular stage 151/200 1.84 6.90e-24 - no
PG 3 PO:0001050 leaf development stages 124/200 1.61 4.89e-12 - no
PG 4 PO:0001054 4 leaf senescence stage 123/200 1.60 1.25e-11 - no
PG 5 PO:0007133 leaf production 117/200 1.39 9.86e-07 - no
PG 4 PO:0007112 1 main shoot growth 117/200 1.39 9.98e-07 - no
PG 3 PO:0007134 A vegetative growth 117/200 1.38 1.51e-06 - no
KW 0 microtubule - 23/200 22.36 6.57e-26 - no
KW 0 based - 13/200 12.72 2.51e-12 - no
KW 0 movement - 14/200 9.16 4.84e-11 - no
KW 0 cycle - 13/200 9.61 1.09e-10 3.00E-92 no
KW 0 ipr013210 - 11/200 8.35 1.01e-08 - no
KW 0 region - 36/200 2.49 1.11e-07 - yes
KW 0 associated - 21/200 3.07 1.56e-06 7.00E-06 no
KW 0 ipr001611 - 12/200 4.25 6.15e-06 - no
KW 0 kinase - 26/200 2.46 7.39e-06 9.00E-07 no
KW 0 nucleus - 29/200 2.25 1.40e-05 - no
KW 0 complex - 22/200 2.60 1.46e-05 - yes
KW 0 pathway - 11/200 4.09 1.89e-05 - no
KW 0 signaling - 13/200 3.49 2.57e-05 - no
KW 0 terminal - 35/200 1.82 1.83e-04 7.00E-06 no
KW 0 receptor - 13/200 2.73 3.34e-04 7.00E-06 no
KW 0 mature - 19/200 2.12 6.87e-04 - no
KW 0 related - 44/200 1.57 8.06e-04 1.00E-18 no
KW 0 leucine - 13/200 2.48 8.77e-04 - no
KW 0 tyrosine - 10/200 2.82 9.54e-04 - no
KW 0 ipr000719 - 14/200 2.25 1.59e-03 - no
KW 0 embryo - 15/200 2.16 1.76e-03 - no
KW 0 development - 15/200 2.15 1.84e-03 2.18E-15 no
KW 0 phosphorylation - 13/200 2.12 3.72e-03 - no
KW 0 threonine - 15/200 2.00 3.73e-03 7.00E-06 no
KW 0 serine - 17/200 1.91 3.80e-03 7.00E-06 no
KW 0 expanded - 10/200 2.29 4.72e-03 - no
KW 0 chloroplast - 28/200 1.59 5.54e-03 - no
KW 0 ipr011009 - 13/200 2.01 5.76e-03 - no
KW 0 transmembrane - 14/200 1.93 6.56e-03 - no
KW 0 ipr017442 - 11/200 2.09 7.04e-03 - no
KW 0 cyclin - 10/200 2.14 7.70e-03 1.29E-16 no
(*1) [B]:Biological process(Gene ontology), [C]:Cellular component(Gene ontology), [M]:Molecular function(Gene ontology), [PS]:Plant Structure(Plant ontology), [PG]:Growth and developmental stages(Plant ontology), [KW]:words found in gene description.
(*2) ([# of genes with the term] / [# of sampling (200)]) / ([# of genes with the term among whole genes] / [# of whole genes])
(*3) P-values were calculated on hypergeometric distribution in which we found n genes with a annotation term during 200 highly correlated genes, while we had N genes with the term in the whole genes.
(*4) PosMed is a system which serve a p-values showing a relationship between the gene and the annotation term based on literature information and Gene-Gene interaction suchas co-expression or protein-protein interactions.
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