AT4G36195.2 (↑ Click "Links", if this line appears at the beginning.)

Other supporting information

Gene Model

Correlation Plot


Expression profile (Values are plotted in Log(2) values.)

Genes with related expresssion profiles.
Positively Correlated Genes
GensPCC Definition Overlap geneDefinition Overlap gene(antisense)Definition
AT5G45160.1 0.980226 root hair defective 3 GTP-binding (RHD3) family protein OMAT5P012610 - - -
AT1G77370.1 0.974769 glutaredoxin, putative OMAT1P022770 - - -
AT5G62620.1 0.97436 galactosyltransferase family protein OMAT5P019100 - - -
AT1G24735.1 0.973147 O-methyltransferase OMAT1P009070 - - -
AT1G14940.1 0.972145 major latex protein-related / MLP-related OMAT1P104930 - OMAT1P005310 -
AT5G45690.1 0.971552 unknown protein OMAT5P111350 - OMAT5P012780,OMAT5P012790 [OMAT5P012780]-, [OMAT5P012790]-
AT5G07830.1 0.970472 AtGUS2 (Arabidopsis thaliana glucuronidase 2) OMAT5P002660 - - -
AT5G55240.1 0.970386 caleosin-related family protein / embryo-specific protein, putative OMAT5P016365 - - -
AT5G57550.1 0.970042 XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3) OMAT5P115090 - OMAT5P017220 -
AT2G45290.1 0.969432 transketolase, putative OMAT2P012660 - - -
Negatively Correlated Genes
GensPCC Definition Overlap geneDefinition Overlap gene(antisense)Definition
AT2G42500.1 -0.904632 PP2A-4 OMAT2P110810 - - -
AT5G11710.1 -0.892697 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related OMAT5P004000 - - -
AT4G04720.1 -0.891418 CPK21 OMAT4P101300 - - -
AT4G34720.1 -0.887776 AVA-P1 OMAT4P110151 - - -
AT4G38510.1 -0.874622 vacuolar ATP synthase subunit B, putative / V-ATPase B subunit, putative / vacuolar proton pump B subunit, putative / V-ATPase 57 kDa subunit, putative OMAT4P111660,OMAT4P111670 [OMAT4P111660]-, [OMAT4P111670]- - -
AT1G60230.1 -0.872848 radical SAM domain-containing protein OMAT1P114590 - - -
AT3G15980.2 -0.863721 coatomer protein complex, subunit beta 2 (beta prime), putative - - - -
AT2G20930.1 -0.861587 FUNCTIONS IN: molecular_function unknown - - - -
AT3G07330.1 -0.857183 ATCSLC6 (CELLULOSE-SYNTHASE LIKE C6) OMAT3P102520 - - -
AT2G21170.1 -0.855925 TIM (TRIOSEPHOSPHATE ISOMERASE) OMAT2P103420 - OMAT2P003840 -

Get whole results

Over-Representation Analysis Result

p-value <= 1.00e-06:20 terms with high significance
1.00e-06 < p-value <= 8.76e-06 :With considering multiple testing correction;
p <= 1.00e-02 / 1142
8.76e-06 < p-value <= 1.00e-02

Type of term (*1) Depth of the term in ontology tree ID/Term Description Number of genes Over-Representative rate (*2) p-value (*3) PosMed p-value (*4)
(Link to PosMed)		 Found on gene annotation
B 3 GO:0042221 response to chemical stimulus 22/200 1.93 1.11e-03 - no
B 5 GO:0032774 RNA biosynthetic process 12/200 2.19 3.65e-03 - no
B 3 GO:0006950 response to stress 21/200 1.69 6.60e-03 - no
B 4 GO:0009725 response to hormone stimulus 10/200 2.12 8.35e-03 - no
C 4 GO:0031224 intrinsic to membrane 11/200 2.05 8.07e-03 - no
M 3 GO:0016491 oxidoreductase activity 19/200 2.25 3.28e-04 - no
PS 4 PO:0006345 pollen tube 42/200 1.44 5.12e-03 - no
PG 5 PO:0007605 androecium developmental stages 43/200 1.47 3.30e-03 - no
KW 0 molecular_function - 77/200 1.52 1.22e-05 - no
KW 0 anthesis - 29/200 2.21 1.99e-05 - no
KW 0 reductase - 11/200 4.04 2.15e-05 - no
KW 0 synthase - 14/200 3.19 3.97e-05 - no
KW 0 oxidoreductase - 14/200 3.00 7.76e-05 - no
KW 0 stage - 36/200 1.86 9.15e-05 - no
KW 0 petal - 29/200 1.99 1.33e-04 - no
KW 0 expansion - 29/200 1.97 1.52e-04 - no
KW 0 differentiation - 29/200 1.92 2.47e-04 - no
KW 0 cellular_component - 70/200 1.44 2.69e-04 - no
KW 0 response - 32/200 1.78 4.60e-04 - no
KW 0 flower - 17/200 2.23 7.06e-04 - no
KW 0 stimulus - 11/200 2.55 1.41e-03 - no
(*1) [B]:Biological process(Gene ontology), [C]:Cellular component(Gene ontology), [M]:Molecular function(Gene ontology), [PS]:Plant Structure(Plant ontology), [PG]:Growth and developmental stages(Plant ontology), [KW]:words found in gene description.
(*2) ([# of genes with the term] / [# of sampling (200)]) / ([# of genes with the term among whole genes] / [# of whole genes])
(*3) P-values were calculated on hypergeometric distribution in which we found n genes with a annotation term during 200 highly correlated genes, while we had N genes with the term in the whole genes.
(*4) PosMed is a system which serve a p-values showing a relationship between the gene and the annotation term based on literature information and Gene-Gene interaction suchas co-expression or protein-protein interactions.
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