AT5G26760.1 (↑ Click "Links", if this line appears at the beginning.)

Other supporting information

Gene Model

Correlation Plot


Expression profile (Values are plotted in Log(2) values.)

Genes with related expresssion profiles.
Positively Correlated Genes
GensPCC Definition Overlap geneDefinition Overlap gene(antisense)Definition
AT3G05090.1 0.846223 transducin family protein / WD-40 repeat family protein OMAT3P101630 - - -
AT5G47520.1 0.839815 AtRABA5a (Arabidopsis Rab GTPase homolog A5a) - - - -
AT1G75340.1 0.83035 zinc finger (CCCH-type) family protein - - - -
AT5G19450.1 0.816718 CDPK19 (CALCIUM-DEPENDENT PROTEIN KINASE 19) OMAT5P105710 - - -
AT2G23460.1 0.815206 XLG1 (EXTRA-LARGE G-PROTEIN 1) OMAT2P004710 - - -
AT4G15080.1 0.812844 zinc finger (DHHC type) family protein OMAT4P103470 - - -
AT4G27100.1 0.811111 RAB GTPase activator - - - -
AT2G26300.1 0.808857 GP ALPHA 1 (G PROTEIN ALPHA SUBUNIT 1) OMAT2P005620 - - -
AT4G14905.1 0.807393 kelch repeat-containing F-box family protein - - - -
AT2G13370.1 0.806083 CHR5 (chromatin remodeling 5) OMAT2P101500 - - -
Negatively Correlated Genes
GensPCC Definition Overlap geneDefinition Overlap gene(antisense)Definition
AT2G35075.1 -0.836113 unknown protein - - - -
AT5G62660.1 -0.80507 F-box family protein - - - -
AT5G17960.1 -0.786181 DC1 domain-containing protein - - - -
AT5G31891.1 -0.780325 transposable element gene - - - -
AT2G12620.1 -0.778936 transposable element gene - - - -
AT1G22275.1 -0.774854 ZYP1b - - - -
AT5G09930.1 -0.774505 ATGCN2 - - - -
AT4G00315.1 -0.772305 F-box family protein - - - -
AT3G42080.1 -0.770578 transposable element gene - - - -
AT1G70050.1 -0.769259 pre-tRNA - - - -

Get whole results

Over-Representation Analysis Result

p-value <= 3.97e-26:20 terms with high significance
3.97e-26 < p-value <= 8.76e-06 :With considering multiple testing correction;
p <= 1.00e-02 / 1142
8.76e-06 < p-value <= 1.00e-02

Type of term (*1) Depth of the term in ontology tree ID/Term Description Number of genes Over-Representative rate (*2) p-value (*3) PosMed p-value (*4)
(Link to PosMed)		 Found on gene annotation
B 3 GO:0016192 vesicle-mediated transport 10/200 6.93 2.58e-07 - no
B 4 GO:0046907 intracellular transport 12/200 5.05 9.19e-07 - no
B 3 GO:0009653 anatomical structure morphogenesis 14/200 4.16 1.70e-06 - no
B 3 GO:0023033 signaling pathway 14/200 4.14 1.81e-06 - no
B 3 GO:0007275 multicellular organismal development 27/200 2.54 2.78e-06 - no
B 3 GO:0051649 establishment of localization in cell 12/200 4.45 3.67e-06 - no
B 3 GO:0051641 cellular localization 12/200 4.08 9.38e-06 - no
B 4 GO:0031323 regulation of cellular metabolic process 25/200 2.31 3.20e-05 - no
B 4 GO:0048513 organ development 14/200 3.16 4.36e-05 - no
B 4 GO:0048731 system development 14/200 3.16 4.42e-05 - no
B 3 GO:0050789 regulation of biological process 34/200 1.97 4.74e-05 - no
B 3 GO:0019222 regulation of metabolic process 26/200 2.21 5.03e-05 - no
B 3 GO:0048856 anatomical structure development 21/200 2.35 9.85e-05 - no
B 3 GO:0009791 post-embryonic development 16/200 2.70 1.03e-04 - no
B 3 GO:0050794 regulation of cellular process 30/200 1.97 1.26e-04 - no
B 3 GO:0006810 transport 22/200 2.15 2.57e-04 - no
B 3 GO:0051234 establishment of localization 22/200 2.14 2.68e-04 - no
B 3 GO:0044237 cellular metabolic process 68/200 1.44 3.19e-04 - no
B 3 GO:0006996 organelle organization 10/200 3.00 5.80e-04 - no
B 4 GO:0006139 nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 30/200 1.78 7.17e-04 - no
B 5 GO:0006464 protein modification process 21/200 2.02 7.83e-04 - no
B 4 GO:0080090 regulation of primary metabolic process 21/200 1.99 9.09e-04 - no
B 4 GO:0043412 macromolecule modification 22/200 1.94 1.03e-03 - no
B 4 GO:0044248 cellular catabolic process 10/200 2.77 1.09e-03 - no
B 5 GO:0006796 phosphate metabolic process 15/200 2.26 1.11e-03 - no
B 4 GO:0006793 phosphorus metabolic process 15/200 2.26 1.12e-03 - no
B 5 GO:0019219 regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 20/200 1.99 1.15e-03 - no
B 4 GO:0051171 regulation of nitrogen compound metabolic process 20/200 1.97 1.31e-03 - no
B 3 GO:0003006 reproductive developmental process 13/200 2.36 1.38e-03 - no
B 4 GO:0034641 cellular nitrogen compound metabolic process 32/200 1.64 1.82e-03 - no
B 3 GO:0043170 macromolecule metabolic process 55/200 1.42 1.90e-03 - no
B 4 GO:0044260 cellular macromolecule metabolic process 51/200 1.45 1.90e-03 - no
B 3 GO:0006807 nitrogen compound metabolic process 32/200 1.61 2.50e-03 - no
B 3 GO:0022414 reproductive process 13/200 2.16 3.12e-03 - no
B 3 GO:0044238 primary metabolic process 66/200 1.33 3.41e-03 - no
B 4 GO:0048608 reproductive structure development 11/200 2.26 3.88e-03 - no
B 5 GO:0016070 RNA metabolic process 16/200 1.88 5.39e-03 - no
B 4 GO:0019538 protein metabolic process 34/200 1.47 7.97e-03 - no
B 5 GO:0090304 nucleic acid metabolic process 24/200 1.60 8.50e-03 - no
B 3 GO:0009056 catabolic process 10/200 2.10 8.89e-03 - no
B 5 GO:0032774 RNA biosynthetic process 11/200 2.01 9.43e-03 - no
C 3 GO:0005622 intracellular 85/200 1.60 3.83e-07 - no
C 5 GO:0005829 cytosol 16/200 3.87 1.05e-06 - no
C 3 GO:0044424 intracellular part 79/200 1.55 4.53e-06 - no
C 4 GO:0043231 intracellular membrane-bounded organelle 67/200 1.53 5.98e-05 - no
C 3 GO:0043227 membrane-bounded organelle 67/200 1.52 6.01e-05 - no
C 3 GO:0043229 intracellular organelle 69/200 1.49 8.69e-05 - no
C 5 GO:0005634 nucleus 30/200 1.92 1.95e-04 - no
C 4 GO:0044444 cytoplasmic part 54/200 1.56 2.32e-04 - no
C 4 GO:0005886 plasma membrane 25/200 2.02 2.85e-04 - no
C 4 GO:0005737 cytoplasm 55/200 1.47 8.61e-04 - no
C 3 GO:0044464 cell part 111/200 1.21 2.24e-03 - no
C 3 GO:0016020 membrane 39/200 1.42 8.38e-03 - no
M 5 GO:0016773 phosphotransferase activity, alcohol group as acceptor 21/200 3.38 3.19e-07 - no
M 5 GO:0016301 kinase activity 23/200 2.86 1.93e-06 - no
M 3 GO:0005515 protein binding 35/200 2.24 2.16e-06 - no
M 3 GO:0000166 nucleotide binding 31/200 2.35 2.99e-06 - no
M 4 GO:0016772 transferase activity, transferring phosphorus-containing groups 24/200 2.62 5.65e-06 - no
M 3 GO:0016740 transferase activity 32/200 1.96 8.45e-05 - no
M 5 GO:0046872 metal ion binding 27/200 1.99 2.17e-04 - no
M 4 GO:0017076 purine nucleotide binding 22/200 2.12 3.08e-04 - no
M 4 GO:0043169 cation binding 27/200 1.88 5.38e-04 - no
M 3 GO:0043167 ion binding 27/200 1.88 5.38e-04 - no
M 5 GO:0032555 purine ribonucleotide binding 20/200 2.04 8.85e-04 - no
M 4 GO:0032553 ribonucleotide binding 20/200 2.04 8.85e-04 - no
M 5 GO:0030554 adenyl nucleotide binding 17/200 1.88 4.43e-03 - no
M 4 GO:0001883 purine nucleoside binding 17/200 1.88 4.43e-03 - no
M 3 GO:0001882 nucleoside binding 17/200 1.87 4.55e-03 - no
PS 4 PO:0000230 inflorescence meristem 157/200 2.02 3.38e-31 - yes
PS 3 PO:0009013 meristem 158/200 1.97 4.97e-30 - yes
PS 5 PO:0009027 megasporophyll 160/200 1.91 5.27e-29 - yes
PS 5 PO:0009052 pedicel 157/200 1.93 1.35e-28 - yes
PS 5 PO:0020038 petiole 152/200 2.00 1.39e-28 - yes
PS 5 PO:0000013 cauline leaf 153/200 1.98 1.64e-28 - yes
PS 4 PO:0009047 stem 158/200 1.87 3.05e-27 - yes
PS 4 PO:0020030 cotyledon 147/200 2.00 6.05e-27 - yes
PS 3 PO:0020091 male gametophyte 156/200 1.88 9.31e-27 - yes
PS 5 PO:0020039 leaf lamina 155/200 1.88 2.20e-26 - yes
PS 4 PO:0000037 shoot apex 158/200 1.84 3.97e-26 - yes
PS 5 PO:0009028 microsporophyll 155/200 1.85 1.93e-25 - yes
PS 3 PO:0009032 petal 158/200 1.80 4.26e-25 - yes
PS 4 PO:0009026 sporophyll 160/200 1.78 5.23e-25 - yes
PS 5 PO:0008037 seedling 158/200 1.79 1.06e-24 - yes
PS 4 PO:0009025 leaf 160/200 1.74 8.41e-24 - yes
PS 3 PO:0009005 root 157/200 1.74 5.81e-23 - yes
PS 3 PO:0009031 sepal 158/200 1.71 3.31e-22 - yes
PS 5 PO:0008034 leaf whorl 159/200 1.69 9.76e-22 - yes
PS 4 PO:0008033 phyllome whorl 159/200 1.69 9.76e-22 - yes
PS 4 PO:0009009 embryo 160/200 1.66 4.63e-21 - yes
PS 3 PO:0009010 seed 160/200 1.64 2.20e-20 - yes
PS 4 PO:0009001 fruit 160/200 1.63 4.22e-20 - yes
PS 3 PO:0006342 infructescence 160/200 1.63 4.22e-20 - yes
PS 3 PO:0006001 phyllome 161/200 1.57 1.82e-18 - yes
PS 4 PO:0009049 inflorescence 161/200 1.54 2.21e-17 - yes
PS 5 PO:0009046 flower 160/200 1.54 4.16e-17 - yes
PS 3 PO:0009006 shoot 162/200 1.49 4.91e-16 - yes
PS 3 PO:0000084 sperm cell 76/200 2.34 2.76e-14 - no
PS 3 PO:0020097 generative cell 76/200 2.34 2.76e-14 - no
PS 4 PO:0006345 pollen tube 65/200 2.23 3.88e-11 - no
PS 4 PO:0000293 guard cell 24/200 2.23 7.93e-05 - no
PS 4 PO:0000351 guard mother cell 24/200 2.22 8.51e-05 - no
PS 3 PO:0000070 meristemoid 24/200 2.22 8.73e-05 - no
PS 4 PO:0005679 epidermis 26/200 2.10 1.16e-04 - no
PS 3 PO:0009014 dermal tissue 26/200 2.10 1.17e-04 - no
PS 5 PO:0006016 leaf epidermis 24/200 2.16 1.33e-04 - no
PS 5 PO:0006035 shoot epidermis 24/200 2.14 1.48e-04 - no
PS 3 PO:0004013 epidermal cell 25/200 2.10 1.58e-04 - no
PS 5 PO:0000349 epidermal initial 24/200 2.13 1.65e-04 - no
PS 4 PO:0004011 initial cell 24/200 2.11 1.82e-04 - no
PS 3 PO:0004010 meristematic cell 24/200 2.11 1.86e-04 - no
PG 4 PO:0001054 4 leaf senescence stage 153/200 1.99 9.45e-29 - yes
PG 3 PO:0001050 leaf development stages 153/200 1.99 1.01e-28 - yes
PG 5 PO:0001078 E expanded cotyledon stage 158/200 1.90 3.65e-28 - yes
PG 5 PO:0001185 C globular stage 157/200 1.91 4.44e-28 - yes
PG 5 PO:0004507 D bilateral stage 157/200 1.91 7.35e-28 - yes
PG 5 PO:0001081 F mature embryo stage 154/200 1.94 1.27e-27 - yes
PG 5 PO:0007133 leaf production 157/200 1.87 1.11e-26 - yes
PG 4 PO:0007112 1 main shoot growth 157/200 1.87 1.14e-26 - yes
PG 3 PO:0007134 A vegetative growth 157/200 1.85 2.76e-26 - yes
PG 4 PO:0007631 embryo development stages 159/200 1.77 2.80e-24 - yes
PG 3 PO:0001170 seed development stages 159/200 1.76 4.88e-24 - yes
PG 4 PO:0007616 4 anthesis 160/200 1.65 7.29e-21 - yes
PG 5 PO:0007604 corolla developmental stages 159/200 1.61 2.86e-19 - yes
PG 4 PO:0007600 3 floral organ development stages 161/200 1.58 8.13e-19 - yes
PG 3 PO:0007615 flower development stages 162/200 1.55 6.10e-18 - yes
PG 5 PO:0007605 androecium developmental stages 66/200 2.25 1.63e-11 - no
KW 0 cytosol - 15/200 6.08 4.58e-09 - no
KW 0 gtpase - 12/200 6.70 3.67e-08 - no
KW 0 ipr016024 - 12/200 6.50 5.19e-08 - no
KW 0 armadillo - 12/200 6.42 6.04e-08 - no
KW 0 nuclear - 12/200 3.90 1.49e-05 - no
KW 0 regulation - 29/200 2.19 2.22e-05 - no
KW 0 nucleotide - 18/200 2.83 2.38e-05 - no
KW 0 ipr017441 - 14/200 3.26 3.09e-05 - no
KW 0 ipr002290 - 11/200 3.73 4.61e-05 - no
KW 0 helical - 11/200 3.65 5.69e-05 - no
KW 0 kinase - 24/200 2.27 5.84e-05 - no
KW 0 serine - 21/200 2.36 9.29e-05 - no
KW 0 alpha - 18/200 2.47 1.45e-04 - no
KW 0 finger - 21/200 2.27 1.58e-04 - no
KW 0 ipr000719 - 16/200 2.57 1.90e-04 - no
KW 0 threonine - 18/200 2.40 2.05e-04 - no
KW 0 intracellular - 14/200 2.71 2.34e-04 - no
KW 0 mediated - 11/200 3.11 2.52e-04 - no
KW 0 processes - 10/200 3.30 2.59e-04 - no
KW 0 ipr011009 - 16/200 2.47 2.92e-04 - no
KW 0 ipr008271 - 13/200 2.66 4.34e-04 - no
KW 0 plasma - 23/200 2.01 5.12e-04 - no
KW 0 nucleus - 25/200 1.94 5.26e-04 - no
KW 0 active - 18/200 2.20 6.02e-04 - no
KW 0 ligase - 11/200 2.82 6.07e-04 - no
KW 0 small - 11/200 2.73 8.00e-04 - no
KW 0 ipr017442 - 13/200 2.47 9.06e-04 - no
KW 0 nucleic - 15/200 2.29 9.44e-04 - no
KW 0 transport - 19/200 1.95 1.89e-03 - no
KW 0 ubiquitin - 11/200 2.45 2.00e-03 - no
KW 0 peptidase - 10/200 2.51 2.36e-03 - no
KW 0 motif - 11/200 2.26 3.77e-03 - no
KW 0 development - 14/200 2.01 4.60e-03 - no
KW 0 complex - 16/200 1.89 5.17e-03 - no
KW 0 region - 24/200 1.66 5.24e-03 - no
KW 0 phosphorylation - 12/200 1.95 9.24e-03 - no
(*1) [B]:Biological process(Gene ontology), [C]:Cellular component(Gene ontology), [M]:Molecular function(Gene ontology), [PS]:Plant Structure(Plant ontology), [PG]:Growth and developmental stages(Plant ontology), [KW]:words found in gene description.
(*2) ([# of genes with the term] / [# of sampling (200)]) / ([# of genes with the term among whole genes] / [# of whole genes])
(*3) P-values were calculated on hypergeometric distribution in which we found n genes with a annotation term during 200 highly correlated genes, while we had N genes with the term in the whole genes.
(*4) PosMed is a system which serve a p-values showing a relationship between the gene and the annotation term based on literature information and Gene-Gene interaction suchas co-expression or protein-protein interactions.
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