IMPC RDF data 統計解析結果（定量値）

undimensional_137275
http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_137275

undimensional_137275(統計解析結果（定量値）)

URI表示モード

undimensional_137275

統計解析結果（定量値）

control cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

cohort_37896
http://metadb.riken.jp/db/IMPC_RDF/Cohort/37896

experimental cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

cohort_38202
http://metadb.riken.jp/db/IMPC_RDF/Cohort/38202

project http://purl.org/dc/elements/1.1/contributor

EUMODIC
http://metadb.riken.jp/db/IMPC_RDF/project/1

organization http://purl.org/dc/elements/1.1/publisher

Wellcome Trust Sanger Institute
http://metadb.riken.jp/db/IMPC_RDF/Organization/3

pipeline http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

EUMODIC Pipeline 2
http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/ESLIM_002

procedure http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

Acoustic Startle&PPI
http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/ESLIM_011_001

parameter http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

PP1 startle magnitude
http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/ESLIM_011_001_002

colony http://metadb.riken.jp/db/IMPC_RDF/measured_colony

http://metadb.riken.jp/db/IMPC_RDF/Colony/EPD0013_1_C02

dependent_variable http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

ESLIM_011_001_002

control_selection_strategy http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

baseline_all

mp_acc http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

male_mp_acc http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

female_mp_acc http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

male_controls http://metadb.riken.jp/db/IMPC_RDF/male_controls

76

male_mutants http://metadb.riken.jp/db/IMPC_RDF/male_mutants

11

female_controls http://metadb.riken.jp/db/IMPC_RDF/female_controls

73

female_mutants http://metadb.riken.jp/db/IMPC_RDF/female_mutants

9

female_control_mean http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

54.5830136986301

male_control_mean http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

53.311447368421

female_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

47.7255555555556

male_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

53.2745454545455

metadata_group http://metadb.riken.jp/db/IMPC_RDF/metadata_group

66d21654327cfea5d1731ee2e3a06c4f

stat_method http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

Mixed Model framework, generalized least squares, equation withoutWeight
http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_generalized_least_squares_equation_withoutWeight

workflow http://metadb.riken.jp/db/IMPC_RDF/workflow

low_batch

weight_available http://metadb.riken.jp/db/IMPC_RDF/weight_available

status http://metadb.riken.jp/db/IMPC_RDF/status

Success

batch_significance http://metadb.riken.jp/db/IMPC_RDF/batch_significance

0

variance_significance http://metadb.riken.jp/db/IMPC_RDF/variance_significance

1

null_test_significance http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

0.512711633061569

genotype_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

-3.15692953020134

genotype_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

4.84824472486273

genotype_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

0.515845311330027

genotype_percentage_change http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

Female: -5.89%, Male: -5.89%

gender_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

gender_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

gender_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

weight_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

+/+

gp1_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

0.100837959582382

gp2_genotype http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

EPD0013_1_C02

gp2_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

0.772136963831102

blups_test http://metadb.riken.jp/db/IMPC_RDF/blups_test

rotated_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

intercept_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

53.9344295302013

intercept_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

1.6678468886689

interaction_significance http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

0

interaction_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

0.573446160387816

gender_female_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

gender_female_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

gender_female_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

gender_male_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

gender_male_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

gender_male_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

classification_tag http://metadb.riken.jp/db/IMPC_RDF/classification_tag

If phenotype is significant - both sexes equally

additional_information http://metadb.riken.jp/db/IMPC_RDF/additional_information