AT1G12100

http://metadb.riken.jp/db/SciNetS_rib102i/crib102u0rib102u10000012100i

AT1G12100

TAIR10 Locus

status_type

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u5i

description

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u13i

• Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, embryo, flower, leaf, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G12510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

label

http://www.w3.org/2000/01/rdf-schema#label

• AT1G12100

attributionURL

http://creativecommons.org/ns#attributionURL

• http://arabidopsis.org/servlets/TairObject?type=locus&name=AT1G12100

locus region

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u3i

• Chr1:4095246-4095845 +
  http://metadb.riken.jp/db/SciNetS_rib102i/crib102u2rib102u26164i

gene type

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u17i

• protein_coding
  http://metadb.riken.jp/db/SciNetS_ria253i/cria253u10i

species

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u18i

• Arabidopsis thaliana
  http://metadb.riken.jp/db/SciNetS_rib166i/crib166u26rib166u3702i

seeAlso

http://www.w3.org/2000/01/rdf-schema#seeAlso

• http://database.riken.jp/sw/item/crib102u0rib102u10000012100i

synonym

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u14i

relationship

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u6i

TAIR10 Gene Model

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u2i

• AT1G12100.1
  http://metadb.riken.jp/db/SciNetS_rib102i/crib102u1rib102u10000121001i

TAIR_gene_model (on ARTADE2DB) (ver. TAIR9)

http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i

• AT1G12100.1
  http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u121210001000i

TAIR によるGO注釈

http://metadb.riken.jp/db/SciNetS_ria269i/pria269u1i

• AT1G12100:located in:extracellular region
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u8551i
• AT1G12100:involved in:lipid transport
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u8550i
• AT1G12100:functions in:lipid binding
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u8552i

TAIRによるPO注釈（生育ステージ）

http://metadb.riken.jp/db/SciNetS_ria270i/pria270u1i

• AT1G12100:expressed during:petal differentiation and expansion stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u144387i
• AT1G12100:expressed during:E expanded cotyledon stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u14185i

TAIRによるPO注釈（器官名）

http://metadb.riken.jp/db/SciNetS_ria273i/pria273u1i

• AT1G12100:expressed in:embryo
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u84654i
• AT1G12100:expressed in:flower
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u185265i
• AT1G12100:expressed in:vascular leaf
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u113294i
• AT1G12100:expressed in:seed
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u99373i
• AT1G12100:expressed in:shoot apex
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u17627i

A.thaliana cDNA

http://metadb.riken.jp/db/SciNetS_ria277i/pria277u2i

• NM_101082
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u26711i

AT_TAIR_gene

http://metadb.riken.jp/db/SciNetS_rib101i/prib101s4i

• AT1G12100.1
  http://metadb.riken.jp/db/SciNetS_rib101i/crib101u0rib101u10000121001i

RIKEN A.thaliana gene family

http://metadb.riken.jp/db/SciNetS_rib123i/prib123s1i

• Cluster12
  http://metadb.riken.jp/db/SciNetS_rib123i/crib123s1rib123u12i

RIKEN A.thaliana gene family (tandem)

http://metadb.riken.jp/db/SciNetS_rib123i/prib123s1i

• tandem cluster352
  http://metadb.riken.jp/db/SciNetS_rib123i/crib123s2rib123u352i

Domain Annotation(A.thaliana)

http://metadb.riken.jp/db/SciNetS_rib126i/prib126u1i

• Tryp_alpha_amyl
  http://metadb.riken.jp/db/SciNetS_rib126i/crib126u1rib126u272i

RIKEN Ortholog(A.thaliana and Rice)

http://metadb.riken.jp/db/SciNetS_rib127i/prib127u1i

• At-Os_Ortholog6501
  http://metadb.riken.jp/db/SciNetS_rib127i/crib127u1rib127u6501i