<a href="http://www.iab.keio.ac.jp/en/" target="_blank"><img style="width: 111px; height: 25px;" title="/dbfiles/SciNetS_ria102i/IAB_Keio_logo.gif" alt="/dbfiles/SciNetS_ria102i/IAB_Keio_logo.gif" src="/dbfiles/SciNetS_ria102i/IAB_Keio_logo.gif" align="right"></a><a href="http://www.psc.riken.go.jp/english/index.html" target="_blank"><img style="width: 149px; height: 25px;" title="RIA00102^swf^PSClogo2_36.png" alt="RIA00102^swf^PSClogo2_36.png" src="/dbfiles/SciNetS_ria102i/PSClogo2_36.png" align="right"></a><span style="background-color: rgb(0, 127, 64); color: rgb(255, 255, 255); font-size: 20px;"> <span style="background-color: rgb(0, 127, 64); color: rgb(0, 127, 64); font-size: 20px;"> <a style="font-family: Arial Black;" href="/db/SciNetS_ria102i" target="_blank"> <span style="background-color: rgb(0, 127, 64); color: rgb(255, 255, 255); text-decoration: none;">&nbsp; <font style="background-color: rgb(0, 127, 64); color: rgb(255, 223, 191);">RIPP-DB</font> &nbsp; (<font style="background-color: rgb(0, 127, 64); color: rgb(255, 223, 191);">RI</font>KEN <font style="background-color: rgb(0, 127, 64); color: rgb(255, 223, 191);">P</font>lant <font style="background-color: rgb(0, 127, 64); color: rgb(255, 223, 191);">P</font>hosphoproteome <font style="background-color: rgb(0, 127, 64); color: rgb(255, 223, 191);">D</font>ata<font style="background-color: rgb(0, 127, 64); color: rgb(255, 223, 191);">b</font>ase)&nbsp;&nbsp; </span> </a> </span></span><br><table width="100%" border="0"><tbody><tr><td><span style="font-size: 12px;"> <a> <img class="image " title="ria102i~swf~pp.bmp" src="/dbfiles/SciNetS_ria102i/pp.bmp?&amp;size=100" width="260px" align="left" height="166px"> </a></span></td><td> The&nbsp;RIPP-DB provides information on phosphopeptides which were identified from Arabidopsis and rice cells by LC-MS/MS-based shotgun phosphoproteomics approach.<span style="font-size: 12px;"> MS/MS spectral information for the identified phosphopeptides at <a href="http://pepbase.iab.keio.ac.jp/phospho/msb/" target="_blank">PepBase (Keio University)</a>are available. Alignment views of orthologous proteins in Arabidopsis and rice mapped with the identified phosphopeptides allow users to predict conserved phosphorylation sites in plants. Current database houses information for 5,143 and 6,919 phosphopeptides from Arabidopsis and rice, respectively. Detail information is available from following articles.<br><br><span style="font-size: 12px;"><strong>Reference to the RIPP-DB:</strong></span><br><span style="font-size: 12px;">We kindly ask users to cite the following papers when publishing results derived from the use of the RIPP-DB: </span><br><span style="font-size: 12px;">Nakagami, H., Sugiyama, N., Mochida, K., Daudi, A., Yoshida, Y., Toyoda, T., Tomita, M., Ishihama, Y. and Shirasu, K. Large-scale comparative phosphoproteomics identifies conserved phosphorylation sites in plants. (2010)</span><span style="font-size: 12px;"> Plant Physiology. Jul;153(3):1161-74&nbsp;( <a href="http://www.plantphysiol.org/cgi/content/full/153/3/1161" target="_blank">PlantPhysiol</a>&nbsp;| <a href="http://www.ncbi.nlm.nih.gov/pubmed/20466843" target="_blank">PubMed</a>)</span><br><span style="font-size: 12px;">Sugiyama, N., Nakagami, H., Mochida, K., Daudi, A., Tomita, M., Shirasu, K. and Ishihama, Y. Large-scale phosphorylation mapping reveales the extent of tyrosine phosphorylation in Arabidopsis. (2008) Molecular Systems Biology. 4:193</span><span style="font-size: 12px;"> (<a href="http://www.nature.com/msb/journal/v4/n1/full/msb200832.html" target="_blank">MSB</a> | <a href="http://www.ncbi.nlm.nih.gov/pubmed/18463617?ordinalpos=2&amp;itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DefaultReportPanel.Pubmed_RVDocSum" target="_blank">PubMed</a>)</span></span></td></tr></tbody></table> 植物リン酸化プロテオームデータベース Plant Phosphoproteome Database