CD00178

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD00178

CD00178

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Rps3a

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• ribosomal protein S3A

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• 40S ribosomal protein S3a
• ribosomal protein S3A

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• FTE1

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/20091

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• ribosomal protein S3A1
  http://metadb.riken.jp/db/mgi_rdf/MGI:1202063

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_016959

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000028081

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.399829

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=180478

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• Martina. Barkić, et.al., The p53 tumor suppressor causes congenital malformations in Rpl24-deficient mice and promotes their survival., Molecular and cellular biology, 2009, 29
  http://rdf.ncbi.nlm.nih.gov/pubmed/19273598
• Susan. Magdaleno, et.al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system., PLoS biology, 2006, 4
  http://rdf.ncbi.nlm.nih.gov/pubmed/16602821
• R. Bhatia, et.al., Nucleotide sequence and expression of ribosomal protein S3 mRNA during embryogenesis in the Mexican axolotl (Ambystoma mexicanum)., Biochemistry and molecular biology international, 1996, 38
  http://rdf.ncbi.nlm.nih.gov/pubmed/8739028
• Juanliang. Cai, et.al., Gene expression in pharyngeal arch 1 during human embryonic development., Human molecular genetics, 2005, 14
  http://rdf.ncbi.nlm.nih.gov/pubmed/15703188
• Timothy S. Fenske, et.al., Identification of candidate alkylator-induced cancer susceptibility genes by whole genome scanning in mice., Cancer research, 2006, 66
  http://rdf.ncbi.nlm.nih.gov/pubmed/16707424
• G. Lutsch, et.al., Immunoelectron microscopic studies on the location of ribosomal proteins on the surface of the 40S ribosomal subunit from rat liver., European journal of cell biology, 1990, 51
  http://rdf.ncbi.nlm.nih.gov/pubmed/2328735
• H M. Gordon, et.al., Tumor necrosis factor induces genes involved in inflammation, cellular and tissue repair, and metabolism in murine fibroblasts., Journal of immunology (Baltimore, Md. : 1950), 1992, 148
  http://rdf.ncbi.nlm.nih.gov/pubmed/1602141
• A. Rebane, et.al., A novel snoRNA (U73) is encoded within the introns of the human and mouse ribosomal protein S3a genes., Gene, 1998, 210
  http://rdf.ncbi.nlm.nih.gov/pubmed/9573378
• F. Lecomte, et.al., The S3a ribosomal protein gene is identical to the Fte-1 (v-fos transformation effector) gene and the TNF-alpha-induced TU-11 gene, and its transcript level is altered in transformed and tumor cells., Gene, 1997, 186
  http://rdf.ncbi.nlm.nih.gov/pubmed/9074506
• Leonard B. Maggi, et.al., Nucleophosmin serves as a rate-limiting nuclear export chaperone for the Mammalian ribosome., Molecular and cellular biology, 2008, 28
  http://rdf.ncbi.nlm.nih.gov/pubmed/18809582

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• cytosol
  http://purl.obolibrary.org/obo/GO_0005829
• apoptotic process
  http://purl.obolibrary.org/obo/GO_0006915
• protein binding
  http://purl.obolibrary.org/obo/GO_0005515
• http://purl.obolibrary.org/obo/GO_1990904
• intracellular
  http://purl.obolibrary.org/obo/GO_0005622
• ribosome
  http://purl.obolibrary.org/obo/GO_0005840
• translation
  http://purl.obolibrary.org/obo/GO_0006412
• nucleus
  http://purl.obolibrary.org/obo/GO_0005634
• cytoplasm
  http://purl.obolibrary.org/obo/GO_0005737
• cytosolic small ribosomal subunit
  http://purl.obolibrary.org/obo/GO_0022627
• cell differentiation
  http://purl.obolibrary.org/obo/GO_0030154
• structural constituent of ribosome
  http://purl.obolibrary.org/obo/GO_0003735
• nucleolus
  http://purl.obolibrary.org/obo/GO_0005730
• cytosolic small ribosomal subunit
  http://purl.obolibrary.org/obo/GO_0000181

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

• http://www.genome.jp/dbget-bin/www_bget?map03010

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName

• Ribosome