CD00213

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD00213

CD00213

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Set

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• SET nuclear oncogene

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• phosphatase 2A inhibitor I2PP2A
• protein SET
• SET translocation
• SET nuclear oncogene
• template-activating factor I

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• StF-IT-1
• I-2PP2A
• TAF-I
• AA407739
• 5730420M11Rik
• 2610030F17Rik

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/56086

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• SET nuclear oncogene
  http://metadb.riken.jp/db/mgi_rdf/MGI:1860267

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_001204875
• https://www.ncbi.nlm.nih.gov/nuccore/NM_023871

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000054766

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.335942

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=600960

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• C. Fukukawa, et.al., Up-regulation of I-2(PP2A)/SET gene expression in rat primary hepatomas and regenerating livers., Cancer letters, 2000, 161
  http://rdf.ncbi.nlm.nih.gov/pubmed/11078917
• Masamitsu N. Asaka, et.al., Sp1-mediated transcription regulation of TAF-Ialpha gene encoding a histone chaperone., Biochemical and biophysical research communications, 2008, 376
  http://rdf.ncbi.nlm.nih.gov/pubmed/18809386
• Nanako. Sato, et.al., Identification of genes differentially expressed in mouse fetuses from streptozotocin-induced diabetic pregnancy by cDNA subtraction., Endocrine journal, 2008, 55
  http://rdf.ncbi.nlm.nih.gov/pubmed/18323671
• H. Yamaza, et.al., Detection of differentially expressed genes in the early developmental stage of the mouse mandible., The International journal of developmental biology, 2001, 45
  http://rdf.ncbi.nlm.nih.gov/pubmed/11461004
• M. Minakuchi, et.al., Identification and characterization of SEB, a novel protein that binds to the acute undifferentiated leukemia-associated protein SET., European journal of biochemistry, 2001, 268
  http://rdf.ncbi.nlm.nih.gov/pubmed/11231286
• K. Misawa, et.al., A method to identify cDNAs based on localization of green fluorescent protein fusion products., Proceedings of the National Academy of Sciences of the United States of America, 2000, 97
  http://rdf.ncbi.nlm.nih.gov/pubmed/10716735
• Roland H. Friedel, et.al., EUCOMM--the European conditional mouse mutagenesis program., Briefings in functional genomics & proteomics, 2007, 6
  http://rdf.ncbi.nlm.nih.gov/pubmed/17967808
• Qin. Shen, et.al., Expression QTL and regulatory network analysis of microtubule-associated protein tau gene., Parkinsonism & related disorders, 2009, 15
  http://rdf.ncbi.nlm.nih.gov/pubmed/19233709
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• N A. Compagnone, et.al., Novel role for the nuclear phosphoprotein SET in transcriptional activation of P450c17 and initiation of neurosteroidogenesis., Molecular endocrinology (Baltimore, Md.), 2000, 14
  http://rdf.ncbi.nlm.nih.gov/pubmed/10847589

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• negative regulation of transcription, DNA-templated
  http://purl.obolibrary.org/obo/GO_0045892
• macromolecular complex
  http://purl.obolibrary.org/obo/GO_0032991
• negative regulation of neuron apoptotic process
  http://purl.obolibrary.org/obo/GO_0043524
• cytoplasm
  http://purl.obolibrary.org/obo/GO_0005737
• perinuclear region of cytoplasm
  http://purl.obolibrary.org/obo/GO_0048471
• endoplasmic reticulum
  http://purl.obolibrary.org/obo/GO_0005783
• nucleus
  http://purl.obolibrary.org/obo/GO_0005634

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName