CD00373

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD00373

CD00373

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Plekhb1

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• pleckstrin homology domain containing, family B (evectins) member 1

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• evectin-1
• PH domain-containing family B member 1
• PH domain containing protein in retina 1
• pleckstrin homology domain-containing family B member 1
• pleckstrin homology domain containing, family B (evectins) member 1
• PH domain-containing protein in retina 1
• pleckstrin homology domain retinal protein 1

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• PHR1
• evt-1
• Phret1
• AI315628

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/27276

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• pleckstrin homology domain containing, family B (evectins) member 1
  http://metadb.riken.jp/db/mgi_rdf/MGI:1351469

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_001163184
• https://www.ncbi.nlm.nih.gov/nuccore/NM_001163187
• https://www.ncbi.nlm.nih.gov/nuccore/NM_013746
• https://www.ncbi.nlm.nih.gov/nuccore/NM_001163182
• https://www.ncbi.nlm.nih.gov/nuccore/NM_001163186
• https://www.ncbi.nlm.nih.gov/nuccore/NM_001163185
• https://www.ncbi.nlm.nih.gov/nuccore/NM_001163183

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000030701

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.26633

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=607651

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• R. Krappa, et.al., Evectins: vesicular proteins that carry a pleckstrin homology domain and localize to post-Golgi membranes., Proceedings of the National Academy of Sciences of the United States of America, 1999, 96
  http://rdf.ncbi.nlm.nih.gov/pubmed/10200314
• Robert W. Burgess, et.al., Evidence for a conserved function in synapse formation reveals Phr1 as a candidate gene for respiratory failure in newborn mice., Molecular and cellular biology, 2004, 24
  http://rdf.ncbi.nlm.nih.gov/pubmed/14729956
• Susan. Magdaleno, et.al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system., PLoS biology, 2006, 4
  http://rdf.ncbi.nlm.nih.gov/pubmed/16602821
• Shunbin. Xu, et.al., PHR1, a PH domain-containing protein expressed in primary sensory neurons., Molecular and cellular biology, 2004, 24
  http://rdf.ncbi.nlm.nih.gov/pubmed/15456885
• Michael D. Taylor, et.al., Radial glia cells are candidate stem cells of ependymoma., Cancer cell, 2005, 8
  http://rdf.ncbi.nlm.nih.gov/pubmed/16226707
• Raphaël. Etournay, et.al., PHR1, an integral membrane protein of the inner ear sensory cells, directly interacts with myosin 1c and myosin VIIa., Journal of cell science, 2005, 118
  http://rdf.ncbi.nlm.nih.gov/pubmed/15976448
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• S. Xu, et.al., PHR1 encodes an abundant, pleckstrin homology domain-containing integral membrane protein in the photoreceptor outer segments., The Journal of biological chemistry, 1999, 274
  http://rdf.ncbi.nlm.nih.gov/pubmed/10585447
• K L. Andrews, et.al., KPL1, which encodes a novel PH domain-containing protein, is induced during ciliated cell differentiation of rat tracheal epithelial cells., Experimental lung research, 2000, 26
  http://rdf.ncbi.nlm.nih.gov/pubmed/10923244
• Susan M. Culican, et.al., Phr1 regulates retinogeniculate targeting independent of activity and ephrin-A signalling., Molecular and cellular neurosciences, 2009, 41
  http://rdf.ncbi.nlm.nih.gov/pubmed/19371781

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• protein C-terminus binding
  http://purl.obolibrary.org/obo/GO_0008022
• protein binding
  http://purl.obolibrary.org/obo/GO_0005515
• cytoplasm
  http://purl.obolibrary.org/obo/GO_0005737
• membrane
  http://purl.obolibrary.org/obo/GO_0016020
• integral component of membrane
  http://purl.obolibrary.org/obo/GO_0016021
• protein homodimerization activity
  http://purl.obolibrary.org/obo/GO_0042803
• photoreceptor outer segment
  http://purl.obolibrary.org/obo/GO_0001750
• Golgi membrane
  http://purl.obolibrary.org/obo/GO_0000139

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName