CD00678

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD00678

CD00678

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Pex19

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• peroxisomal biogenesis factor 19

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• peroxisomal biogenesis factor 19
• peroxisomal farnesylated protein
• peroxin-19

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• peroxisome biogenesis factor 19
• Pxf

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/19298

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• peroxisomal biogenesis factor 19
  http://metadb.riken.jp/db/mgi_rdf/MGI:1334458

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_001159525
• https://www.ncbi.nlm.nih.gov/nuccore/NM_023041

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000003464

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.392262
• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.247764

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=600279

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• Z. Kibar, et.al., Ltap, a mammalian homolog of Drosophila Strabismus/Van Gogh, is altered in the mouse neural tube mutant Loop-tail., Nature genetics, 2001, 28
  http://rdf.ncbi.nlm.nih.gov/pubmed/11431695
• Van. Tompkins, et.al., Identification of novel ARF binding proteins by two-hybrid screening., Cell cycle (Georgetown, Tex.), 2006, 5
  http://rdf.ncbi.nlm.nih.gov/pubmed/16582619
• Susan. Magdaleno, et.al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system., PLoS biology, 2006, 4
  http://rdf.ncbi.nlm.nih.gov/pubmed/16602821
• Gilda. Cobellis, et.al., Tagging genes with cassette-exchange sites., Nucleic acids research, 2005, 33
  http://rdf.ncbi.nlm.nih.gov/pubmed/15741177
• J. Eddleston, et.al., Physical and transcriptional map of a 3-Mb region of mouse chromosome 1 containing the gene for the neural tube defect mutant loop-tail (Lp)., Genomics, 1999, 56
  http://rdf.ncbi.nlm.nih.gov/pubmed/10051400
• J N. Murdoch, et.al., Severe neural tube defects in the loop-tail mouse result from mutation of Lpp1, a novel gene involved in floor plate specification., Human molecular genetics, 2001, 10
  http://rdf.ncbi.nlm.nih.gov/pubmed/11709546
• T. Sugihara, et.al., Pex19p dampens the p19ARF-p53-p21WAF1 tumor suppressor pathway., The Journal of biological chemistry, 2001, 276
  http://rdf.ncbi.nlm.nih.gov/pubmed/11259404
• K. Doudney, et.al., Comparative physical and transcript maps of approximately 1 Mb around loop-tail, a gene for severe neural tube defects on distal mouse chromosome 1 and human chromosome 1q22-q23., Genomics, 2001, 72
  http://rdf.ncbi.nlm.nih.gov/pubmed/11401431
• Doug. Stryke, et.al., BayGenomics: a resource of insertional mutations in mouse embryonic stem cells., Nucleic acids research, 2003, 31
  http://rdf.ncbi.nlm.nih.gov/pubmed/12520002

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• integral component of membrane
  http://purl.obolibrary.org/obo/GO_0016021
• chaperone-mediated protein transport
  http://purl.obolibrary.org/obo/GO_0072321
• peroxisome membrane biogenesis
  http://purl.obolibrary.org/obo/GO_0016557
• protein import into peroxisome membrane
  http://purl.obolibrary.org/obo/GO_0045046
• peroxisomal membrane
  http://purl.obolibrary.org/obo/GO_0005778
• nucleus
  http://purl.obolibrary.org/obo/GO_0005634
• peroxisome organization
  http://purl.obolibrary.org/obo/GO_0007031
• protein targeting to peroxisome
  http://purl.obolibrary.org/obo/GO_0006625
• protein N-terminus binding
  http://purl.obolibrary.org/obo/GO_0047485
• membrane
  http://purl.obolibrary.org/obo/GO_0016020
• peroxisome
  http://purl.obolibrary.org/obo/GO_0005777
• cytoplasm
  http://purl.obolibrary.org/obo/GO_0005737
• protein binding
  http://purl.obolibrary.org/obo/GO_0005515

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

• http://www.genome.jp/dbget-bin/www_bget?map04146

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName

• Peroxisome