Brain Transcriptome Database (BrainTx)
トランスクリプトームデータ
CD01178
http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD01178
CD01178(トランスクリプトームデータ)
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CD01178
トランスクリプトームデータ
遺伝子シンボル
http://metadb.riken.jp/db/BrainTx/geneSymbol
Gli3
遺伝子名
http://metadb.riken.jp/db/BrainTx/geneName
GLI-Kruppel family member GLI3
別名
http://metadb.riken.jp/db/BrainTx/alt_name
extra toes
GLI3 full length protein
zinc finger protein GLI3
transcriptional activator GLI3
GLI-Kruppel family member GLI3
GLI3 form of 190 kDa
polydactyly Nagoya
anterior digit pattern deformity
別名略称
http://metadb.riken.jp/db/BrainTx/alt_symbol
add
PAPA1
Xt
PAP-A
AI854843
GLI3FL
Bph
brachyphalangy
GCPS
ACLS
PHS
GLI3-190
AU023367
PAPA
PPDIV
PAPB
Pdn
NCBI遺伝子
http://metadb.riken.jp/db/BrainTx/NCBIGene
https://www.ncbi.nlm.nih.gov/gene/14634
MGI遺伝子
http://metadb.riken.jp/db/BrainTx/mgiGene
GLI-Kruppel family member GLI3
http://metadb.riken.jp/db/mgi_rdf/MGI:95729
BrainTx遺伝子
http://metadb.riken.jp/db/BrainTx/brainTxGene
脳発現画像
http://metadb.riken.jp/db/BrainTx/brainExpressionImage
時系列発現 (小脳)
http://metadb.riken.jp/db/BrainTx/brainExpression
脳発現特異性/組織別発現
http://metadb.riken.jp/db/BrainTx/brainSpecificity
BrainTx遺伝子カテゴリー
http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory
NCBI Accession Number
http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber
https://www.ncbi.nlm.nih.gov/nuccore/NM_008130
Ensembl 遺伝子
http://metadb.riken.jp/db/BrainTx/ensemblGene
http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000021318
UniGene 遺伝子
http://metadb.riken.jp/db/BrainTx/uniGene
https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.5098
OMIM ID
http://metadb.riken.jp/db/BrainTx/omim
https://www.omim.org/entry/603434?search=603434&highlight=165240
PubMed ID (PMID)
http://rdf.ncbi.nlm.nih.gov/pubmed/
R T. Swank, et.al., Sandy: a new mouse model for platelet storage pool deficiency., Genetical research, 1991, 58
http://rdf.ncbi.nlm.nih.gov/pubmed/1936982
H. Thien, et.al., Cloning and sequence analysis of the murine Gli3 cDNA., Biochimica et biophysica acta, 1996, 1307
http://rdf.ncbi.nlm.nih.gov/pubmed/8688459
A. Vortkamp, et.al., Deletion of GLI3 supports the homology of the human Greig cephalopolysyndactyly syndrome (GCPS) and the mouse mutant extra toes (Xt)., Mammalian genome : official journal of the International Mammalian Genome Society, 1992, 3
http://rdf.ncbi.nlm.nih.gov/pubmed/1322743
Juan. Li, et.al., Increased proteolytic processing of full-length Gli2 transcription factor reduces the hedgehog pathway activity in vivo., Developmental dynamics : an official publication of the American Association of Anatomists, 2011, 240
http://rdf.ncbi.nlm.nih.gov/pubmed/21337666
D R. Johnson, The interfrontal bone and mutant genes in the mouse., Journal of anatomy, 1976, 121
http://rdf.ncbi.nlm.nih.gov/pubmed/1018005
T. Schimmang, et.al., Expression of the zinc finger gene Gli3 is affected in the morphogenetic mouse mutant extra-toes (Xt)., Development (Cambridge, England), 1992, 116
http://rdf.ncbi.nlm.nih.gov/pubmed/1289066
Kazushi. Aoto, et.al., Mouse GLI3 regulates Fgf8 expression and apoptosis in the developing neural tube, face, and limb bud., Developmental biology, 2002, 251
http://rdf.ncbi.nlm.nih.gov/pubmed/12435361
Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
T. Theil, et.al., Gli3 is required for Emx gene expression during dorsal telencephalon development., Development (Cambridge, England), 1999, 126
http://rdf.ncbi.nlm.nih.gov/pubmed/10409502
A. Vortkamp, et.al., GLI3 zinc-finger gene interrupted by translocations in Greig syndrome families., Nature, 1991, 352
http://rdf.ncbi.nlm.nih.gov/pubmed/1650914
Jinny J. Kim, et.al., Suppressor of fused controls mid-hindbrain patterning and cerebellar morphogenesis via GLI3 repressor., The Journal of neuroscience : the official journal of the Society for Neuroscience, 2011, 31
http://rdf.ncbi.nlm.nih.gov/pubmed/21289193
Daisuke. Matsumaru, et.al., Genetic analysis of Hedgehog signaling in ventral body wall development and the onset of omphalocele formation., PloS one, 2011, 6
http://rdf.ncbi.nlm.nih.gov/pubmed/21283718
Huiqing. Zeng, et.al., Coordinated translocation of mammalian Gli proteins and suppressor of fused to the primary cilium., PloS one, 2010, 5
http://rdf.ncbi.nlm.nih.gov/pubmed/21209912
Gene Ontology
http://metadb.riken.jp/db/BrainTx/golink
anterior/posterior pattern specification
http://purl.obolibrary.org/obo/GO_0009952
kidney development
http://purl.obolibrary.org/obo/GO_0001822
T cell differentiation in thymus
http://purl.obolibrary.org/obo/GO_0033077
melanocyte differentiation
http://purl.obolibrary.org/obo/GO_0030318
odontogenesis of dentin-containing tooth
http://purl.obolibrary.org/obo/GO_0042475
transcription, DNA-templated
http://purl.obolibrary.org/obo/GO_0006351
intracellular
http://purl.obolibrary.org/obo/GO_0005622
nucleus
http://purl.obolibrary.org/obo/GO_0005634
central nervous system development
http://purl.obolibrary.org/obo/GO_0007417
forebrain development
http://purl.obolibrary.org/obo/GO_0030900
regulation of cell differentiation
http://purl.obolibrary.org/obo/GO_0045595
tube development
http://purl.obolibrary.org/obo/GO_0035295
embryonic digit morphogenesis
http://purl.obolibrary.org/obo/GO_0042733
negative regulation of transcription, DNA-templated
http://purl.obolibrary.org/obo/GO_0045892
limb development
http://purl.obolibrary.org/obo/GO_0060173
frontal suture morphogenesis
http://purl.obolibrary.org/obo/GO_0060364
negative regulation of neuron differentiation
http://purl.obolibrary.org/obo/GO_0045665
forebrain dorsal/ventral pattern formation
http://purl.obolibrary.org/obo/GO_0021798
sagittal suture morphogenesis
http://purl.obolibrary.org/obo/GO_0060367
embryonic digestive tract morphogenesis
http://purl.obolibrary.org/obo/GO_0048557
positive regulation of chondrocyte differentiation
http://purl.obolibrary.org/obo/GO_0032332
cell projection
http://purl.obolibrary.org/obo/GO_0042995
pallium development
http://purl.obolibrary.org/obo/GO_0021543
negative regulation of smoothened signaling pathway
http://purl.obolibrary.org/obo/GO_0045879
forebrain radial glial cell differentiation
http://purl.obolibrary.org/obo/GO_0021861
neuron fate commitment
http://purl.obolibrary.org/obo/GO_0048663
positive regulation of alpha-beta T cell differentiation
http://purl.obolibrary.org/obo/GO_0046638
regulation of gene expression
http://purl.obolibrary.org/obo/GO_0010468
nucleolus
http://purl.obolibrary.org/obo/GO_0005730
transcriptional repressor complex
http://purl.obolibrary.org/obo/GO_0017053
cytosol
http://purl.obolibrary.org/obo/GO_0005829
negative regulation of cell differentiation
http://purl.obolibrary.org/obo/GO_0045596
cell differentiation involved in kidney development
http://purl.obolibrary.org/obo/GO_0061005
positive regulation of transcription, DNA-templated
http://purl.obolibrary.org/obo/GO_0045893
oligodendrocyte differentiation
http://purl.obolibrary.org/obo/GO_0048709
regulation of cell proliferation
http://purl.obolibrary.org/obo/GO_0042127
positive regulation of osteoblast differentiation
http://purl.obolibrary.org/obo/GO_0045669
embryonic morphogenesis
http://purl.obolibrary.org/obo/GO_0048598
negative regulation of canonical Wnt signaling pathway
http://purl.obolibrary.org/obo/GO_0090090
mammary gland development
http://purl.obolibrary.org/obo/GO_0030879
lateral semicircular canal development
http://purl.obolibrary.org/obo/GO_0060875
camera-type eye development
http://purl.obolibrary.org/obo/GO_0043010
inner ear development
http://purl.obolibrary.org/obo/GO_0048839
histone deacetylase binding
http://purl.obolibrary.org/obo/GO_0042826
embryonic skeletal system morphogenesis
http://purl.obolibrary.org/obo/GO_0048704
regulation of apoptotic process
http://purl.obolibrary.org/obo/GO_0042981
chromatin binding
http://purl.obolibrary.org/obo/GO_0003682
protein processing
http://purl.obolibrary.org/obo/GO_0016485
mammary gland specification
http://purl.obolibrary.org/obo/GO_0060594
metanephros development
http://purl.obolibrary.org/obo/GO_0001656
camera-type eye morphogenesis
http://purl.obolibrary.org/obo/GO_0048593
lambdoid suture morphogenesis
http://purl.obolibrary.org/obo/GO_0060366
spinal cord dorsal/ventral patterning
http://purl.obolibrary.org/obo/GO_0021513
zinc ion binding
http://purl.obolibrary.org/obo/GO_0008270
negative regulation of apoptotic process
http://purl.obolibrary.org/obo/GO_0043066
brain development
http://purl.obolibrary.org/obo/GO_0007420
thymocyte apoptotic process
http://purl.obolibrary.org/obo/GO_0070242
developmental growth
http://purl.obolibrary.org/obo/GO_0048589
anterior semicircular canal development
http://purl.obolibrary.org/obo/GO_0060873
dorsal/ventral pattern formation
http://purl.obolibrary.org/obo/GO_0009953
embryonic limb morphogenesis
http://purl.obolibrary.org/obo/GO_0030326
metal ion binding
http://purl.obolibrary.org/obo/GO_0046872
telencephalon development
http://purl.obolibrary.org/obo/GO_0021537
smoothened signaling pathway
http://purl.obolibrary.org/obo/GO_0007224
smoothened signaling pathway involved in ventral spinal cord interneuron specification
http://purl.obolibrary.org/obo/GO_0021775
sequence-specific DNA binding transcription factor activity
http://purl.obolibrary.org/obo/GO_0003700
intracellular membrane-bounded organelle
http://purl.obolibrary.org/obo/GO_0043231
regulation of transcription, DNA-templated
http://purl.obolibrary.org/obo/GO_0006355
artery development
http://purl.obolibrary.org/obo/GO_0060840
beta-catenin binding
http://purl.obolibrary.org/obo/GO_0008013
nucleic acid binding
http://purl.obolibrary.org/obo/GO_0003676
embryonic digestive tract development
http://purl.obolibrary.org/obo/GO_0048566
in utero embryonic development
http://purl.obolibrary.org/obo/GO_0001701
positive regulation of protein import into nucleus
http://purl.obolibrary.org/obo/GO_0042307
lung development
http://purl.obolibrary.org/obo/GO_0030324
cerebral cortex radial glia guided migration
http://purl.obolibrary.org/obo/GO_0021801
neural tube development
http://purl.obolibrary.org/obo/GO_0021915
positive regulation of neuroblast proliferation
http://purl.obolibrary.org/obo/GO_0002052
subpallium development
http://purl.obolibrary.org/obo/GO_0021544
cilium
http://purl.obolibrary.org/obo/GO_0005929
hindgut morphogenesis
http://purl.obolibrary.org/obo/GO_0007442
positive regulation of transcription from RNA polymerase II promoter
http://purl.obolibrary.org/obo/GO_0045944
histone acetyltransferase binding
http://purl.obolibrary.org/obo/GO_0035035
negative regulation of transcription from RNA polymerase II promoter
http://purl.obolibrary.org/obo/GO_0000122
proximal/distal pattern formation
http://purl.obolibrary.org/obo/GO_0009954
optic nerve morphogenesis
http://purl.obolibrary.org/obo/GO_0021631
lateral ganglionic eminence cell proliferation
http://purl.obolibrary.org/obo/GO_0022018
anatomical structure formation involved in morphogenesis
http://purl.obolibrary.org/obo/GO_0048646
anatomical structure development
http://purl.obolibrary.org/obo/GO_0048856
negative regulation of alpha-beta T cell differentiation
http://purl.obolibrary.org/obo/GO_0046639
negative regulation of cell proliferation
http://purl.obolibrary.org/obo/GO_0008285
smoothened signaling pathway involved in spinal cord motor neuron cell fate specification
http://purl.obolibrary.org/obo/GO_0021776
pattern specification process
http://purl.obolibrary.org/obo/GO_0007389
sequence-specific DNA binding
http://purl.obolibrary.org/obo/GO_0043565
tongue development
http://purl.obolibrary.org/obo/GO_0043586
negative thymic T cell selection
http://purl.obolibrary.org/obo/GO_0045060
protein binding
http://purl.obolibrary.org/obo/GO_0005515
smoothened signaling pathway involved in dorsal/ventral neural tube patterning
http://purl.obolibrary.org/obo/GO_0060831
limb morphogenesis
http://purl.obolibrary.org/obo/GO_0035108
branching involved in ureteric bud morphogenesis
http://purl.obolibrary.org/obo/GO_0001658
DNA binding
http://purl.obolibrary.org/obo/GO_0003677
cytoplasm
http://purl.obolibrary.org/obo/GO_0005737
heart development
http://purl.obolibrary.org/obo/GO_0007507
axon guidance
http://purl.obolibrary.org/obo/GO_0007411
InterPro ID
http://metadb.riken.jp/db/BrainTx/interPro
KEGG Pathway ID
http://metadb.riken.jp/db/BrainTx/keggPathwayID
http://www.genome.jp/dbget-bin/www_bget?map04340
http://www.genome.jp/dbget-bin/www_bget?map05217
http://www.genome.jp/dbget-bin/www_bget?map05200
KEGG Pathway 名称
http://metadb.riken.jp/db/BrainTx/keggPathwayName
Basal cell carcinoma
Pathways in cancer
Hedgehog signaling pathway
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