CD01184

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD01184

CD01184

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Sgcd

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• sarcoglycan, delta (dystrophin-associated glycoprotein)

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• sarcoglycan, delta (35kD dystrophin-associated glycoprotein)
• 35DAG
• delta-sarcoglycan
• sarcoglycan, delta (dystrophin-associated glycoprotein)
• 35 kDa dystrophin-associated glycoprotein
• SG-delta

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• 35kDa
• DAGD
• delta-SG
• LGMD2F
• SGD
• 35DAG
• SG-delta
• CMD1L

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/24052

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• sarcoglycan, delta (dystrophin-associated glycoprotein)
  http://metadb.riken.jp/db/mgi_rdf/MGI:1346525

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_011891

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000020354

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.338890

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=601411

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• http://rdf.ncbi.nlm.nih.gov/pubmed/10679964
• R. Coral-Vazquez, et.al., Disruption of the sarcoglycan-sarcospan complex in vascular smooth muscle: a novel mechanism for cardiomyopathy and muscular dystrophy., Cell, 1999, 98
  http://rdf.ncbi.nlm.nih.gov/pubmed/10481911
• Y M. Chan, et.al., Molecular organization of sarcoglycan complex in mouse myotubes in culture., The Journal of cell biology, 1998, 143
  http://rdf.ncbi.nlm.nih.gov/pubmed/9864373
• Anh T. Nguyen, et.al., DOT1L regulates dystrophin expression and is critical for cardiac function., Genes & development, 2011, 25
  http://rdf.ncbi.nlm.nih.gov/pubmed/21289070
• Dejia. Li, et.al., Nitrosative stress elicited by nNOSµ delocalization inhibits muscle force in dystrophin-null mice., The Journal of pathology, 2011, 223
  http://rdf.ncbi.nlm.nih.gov/pubmed/21125668
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• Jeffery A. Goldstein, et.al., SMAD signaling drives heart and muscle dysfunction in a Drosophila model of muscular dystrophy., Human molecular genetics, 2011, 20
  http://rdf.ncbi.nlm.nih.gov/pubmed/21138941
• Alhondra. Solares-Pérez, et.al., Altered calcium pump and secondary deficiency of gamma-sarcoglycan and microspan in sarcoplasmic reticulum membranes isolated from delta-sarcoglycan knockout mice., Cell calcium, 2010, 48
  http://rdf.ncbi.nlm.nih.gov/pubmed/20638123
• V. Straub, et.al., epsilon-sarcoglycan replaces alpha-sarcoglycan in smooth muscle to form a unique dystrophin-glycoprotein complex., The Journal of biological chemistry, 1999, 274
  http://rdf.ncbi.nlm.nih.gov/pubmed/10488149
• S. Noguchi, et.al., Developmental expression of sarcoglycan gene products in cultured myocytes., Biochemical and biophysical research communications, 1999, 262
  http://rdf.ncbi.nlm.nih.gov/pubmed/10448073

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• sarcoglycan complex
  http://purl.obolibrary.org/obo/GO_0016012
• plasma membrane
  http://purl.obolibrary.org/obo/GO_0005886
• cytoskeleton organization
  http://purl.obolibrary.org/obo/GO_0007010
• dystrophin-associated glycoprotein complex
  http://purl.obolibrary.org/obo/GO_0016010
• cytoskeleton
  http://purl.obolibrary.org/obo/GO_0005856
• integral component of plasma membrane
  http://purl.obolibrary.org/obo/GO_0005887
• cytoplasm
  http://purl.obolibrary.org/obo/GO_0005737
• integral component of membrane
  http://purl.obolibrary.org/obo/GO_0016021
• membrane organization
  http://purl.obolibrary.org/obo/GO_0061024
• protein binding
  http://purl.obolibrary.org/obo/GO_0005515
• membrane
  http://purl.obolibrary.org/obo/GO_0016020

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

• http://www.genome.jp/dbget-bin/www_bget?map05412
• http://www.genome.jp/dbget-bin/www_bget?map05410
• http://www.genome.jp/dbget-bin/www_bget?map05416
• http://www.genome.jp/dbget-bin/www_bget?map05414

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName

• Arrhythmogenic right ventricular cardiomyopathy (ARVC)
• Dilated cardiomyopathy
• Hypertrophic cardiomyopathy (HCM)
• Viral myocarditis