CD01424

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD01424

CD01424

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Ube2k

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• huntingtin-interacting protein 2
• ubiquitin carrier protein
• ubiquitin-conjugating enzyme E2 K
• huntingtin interacting protein 2
• ubiquitin-conjugating enzyme E2(25K)
• ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)
• ubiquitin-conjugating enzyme E2-25K
• E2(25K)
• ubiquitin-protein ligase
• ubiquitin-conjugating enzyme E2-25 kDa
• HIP-2

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• Lig
• AW492011
• E2-25k
• Hip2
• D5Ertd601e
• Hypg

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/53323

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• ubiquitin-conjugating enzyme E2K
  http://metadb.riken.jp/db/mgi_rdf/MGI:1858216

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_016786

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000029203

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.319512
• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.441014

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=602846

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• Doug. Stryke, et.al., BayGenomics: a resource of insertional mutations in mouse embryonic stem cells., Nucleic acids research, 2003, 31
  http://rdf.ncbi.nlm.nih.gov/pubmed/12520002
• Sungmin. Song, et.al., E2-25K/Hip-2 regulates caspase-12 in ER stress-mediated Abeta neurotoxicity., The Journal of cell biology, 2008, 182
  http://rdf.ncbi.nlm.nih.gov/pubmed/18710920
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• Y. Tanno, et.al., Localization of huntingtin-interacting protein-2 (Hip-2) mRNA in the developing mouse brain., Journal of chemical neuroanatomy, 1999, 17
  http://rdf.ncbi.nlm.nih.gov/pubmed/10585161
• Axel. Visel, et.al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo., Nucleic acids research, 2004, 32
  http://rdf.ncbi.nlm.nih.gov/pubmed/14681479
• Seth. Blackshaw, et.al., Genomic analysis of mouse retinal development., PLoS biology, 2004, 2
  http://rdf.ncbi.nlm.nih.gov/pubmed/15226823
• Y. Wang, et.al., YAC/BAC-based physical and transcript mapping around the gracile axonal dystrophy (gad) locus identifies Uchl1, Pmx2b, Atp3a2, and Hip2 genes., Genomics, 2000, 66
  http://rdf.ncbi.nlm.nih.gov/pubmed/10873389

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• protein K48-linked ubiquitination
  http://purl.obolibrary.org/obo/GO_0070936
• ligase activity
  http://purl.obolibrary.org/obo/GO_0016874
• ubiquitin-ubiquitin ligase activity
  http://purl.obolibrary.org/obo/GO_0034450
• ubiquitin protein ligase binding
  http://purl.obolibrary.org/obo/GO_0031625
• acid-amino acid ligase activity
  http://purl.obolibrary.org/obo/GO_0016881
• cytoplasm
  http://purl.obolibrary.org/obo/GO_0005737
• nucleotide binding
  http://purl.obolibrary.org/obo/GO_0000166
• ATP binding
  http://purl.obolibrary.org/obo/GO_0005524

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

• http://www.genome.jp/dbget-bin/www_bget?map04120

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName

• Ubiquitin mediated proteolysis