CD01931

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD01931

CD01931

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Acp1

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• acid phosphatase 1, soluble

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• LMW-PTPase
• acid phosphatase 1, soluble
• low molecular weight cytosolic acid phosphatase
• low molecular weight phosphotyrosine protein phosphatase

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• 4632432E04Rik
• AI427468
• Acp-1
• LMW-PTP

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/11431

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• acid phosphatase 1, soluble
  http://metadb.riken.jp/db/mgi_rdf/MGI:87881

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_001110239
• https://www.ncbi.nlm.nih.gov/nuccore/NM_021330

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000044573

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.359831

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=171500

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• H. Tanino, et.al., Abundance of low molecular weight phosphotyrosine protein phosphatase in the nerve-ending fraction in the brain., Biological & pharmaceutical bulletin, 1999, 22
  http://rdf.ncbi.nlm.nih.gov/pubmed/10480315
• Livia. Lucentini, et.al., Low molecular weight phosphotyrosine protein phosphatase from PC12 cells. Purification, some properties and expression during neurogenesis in vitro and in vivo., The international journal of biochemistry & cell biology, 2003, 35
  http://rdf.ncbi.nlm.nih.gov/pubmed/12798350
• Susan. Magdaleno, et.al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system., PLoS biology, 2006, 4
  http://rdf.ncbi.nlm.nih.gov/pubmed/16602821
• Elisa. Giannoni, et.al., A novel redox-based switch: LMW-PTP oxidation enhances Grb2 binding and leads to ERK activation., Biochemical and biophysical research communications, 2006, 348
  http://rdf.ncbi.nlm.nih.gov/pubmed/16890200
• Anna. Caselli, et.al., Low molecular weight protein tyrosine phosphatase and caveolin-1: interaction and isoenzyme-dependent regulation., Biochemistry, 2007, 46
  http://rdf.ncbi.nlm.nih.gov/pubmed/17469800
• Willian F. Zambuzzi, et.al., Modulation of Src activity by low molecular weight protein tyrosine phosphatase during osteoblast differentiation., Cellular physiology and biochemistry : international journal of experimental cellular physiology, biochemistry, and pharmacology, 2008, 22
  http://rdf.ncbi.nlm.nih.gov/pubmed/19088431
他7件を見る
• M. Yasue, et.al., Chromosomal assignments of 23 biochemical loci of the rat by using rat x mouse somatic cell hybrids., Cytogenetics and cell genetics, 1991, 57
  http://rdf.ncbi.nlm.nih.gov/pubmed/1914521
• U. Francke, et.al., Gene mapping in Mus musculus by interspecific cell hybridization: assignment of the genes for tripeptidase-1 to chromosome 10, dipeptidase-2 to chromosome 18, acid phosphatase-1 to chromosome 12, and adenylate kinase-1 to chromosome 2., Cytogenetics and cell genetics, 1977, 19
  http://rdf.ncbi.nlm.nih.gov/pubmed/198184
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• S J. O'Brien, et.al., Genetic mapping in mammals: chromosome map of domestic cat., Science (New York, N.Y.), 1982, 216
  http://rdf.ncbi.nlm.nih.gov/pubmed/7063884
• R L. Stallings, et.al., Confirmational, provisional, and/or regional assignment of 15 enzyme loci onto Chinese hamster autosomes 1, 2, and 7., Somatic cell genetics, 1981, 7
  http://rdf.ncbi.nlm.nih.gov/pubmed/7323947
• R. Schäfer, et.al., Assignment of the gene for cytoplasmic glutamate-oxaloacetate transaminase to mouse chromosome 19 using chinese hamster x mouse somatic cell hybrids., Somatic cell genetics, 1980, 6
  http://rdf.ncbi.nlm.nih.gov/pubmed/7444718
• F. Magherini, et.al., Cloning of murine low molecular weight phosphotyrosine protein phosphatase cDNA: identification of a new isoform., FEBS letters, 1998, 437
  http://rdf.ncbi.nlm.nih.gov/pubmed/9824304

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• acid phosphatase activity
  http://purl.obolibrary.org/obo/GO_0003993
• phosphoprotein phosphatase activity
  http://purl.obolibrary.org/obo/GO_0004721
• protein tyrosine phosphatase activity
  http://purl.obolibrary.org/obo/GO_0004725
• non-membrane spanning protein tyrosine phosphatase activity
  http://purl.obolibrary.org/obo/GO_0004726
• nucleus
  http://purl.obolibrary.org/obo/GO_0005634
• cytoplasm
  http://purl.obolibrary.org/obo/GO_0005737
他7件を見る
• protein dephosphorylation
  http://purl.obolibrary.org/obo/GO_0006470
• cytoplasmic side of plasma membrane
  http://purl.obolibrary.org/obo/GO_0009898
• hydrolase activity
  http://purl.obolibrary.org/obo/GO_0016787
• phosphatase activity
  http://purl.obolibrary.org/obo/GO_0016791
• SH3 domain binding
  http://purl.obolibrary.org/obo/GO_0017124
• synaptosome
  http://purl.obolibrary.org/obo/GO_0019717
• peptidyl-tyrosine dephosphorylation
  http://purl.obolibrary.org/obo/GO_0035335

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

• http://www.genome.jp/dbget-bin/www_bget?map00740
• http://www.genome.jp/dbget-bin/www_bget?map04520

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName

• Adherens junction
• Riboflavin metabolism