CD01956

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD01956

CD01956

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Hnrnpa1

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• heterogeneous nuclear ribonucleoprotein A1

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• hnRNP core protein A1
• heterogeneous nuclear ribonucleoprotein A1
• single-strand-binding protein
• helix-destabilizing protein
• topoisomerase-inhibitor suppressed
• helix destabilizing protein
• HDP-1

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• hnrnp-A1
• Hnrpa1
• D15Ertd119e
• hnrnp-A
• hnRNP A1
• Hdp

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/15382

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• heterogeneous nuclear ribonucleoprotein A1
  http://metadb.riken.jp/db/mgi_rdf/MGI:104820

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_001039129
• https://www.ncbi.nlm.nih.gov/nuccore/NM_010447

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000046434

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.237064
• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.432031

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=164017

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• Elena. Bevilacqua, et.al., eIF2alpha phosphorylation tips the balance to apoptosis during osmotic stress., The Journal of biological chemistry, 2010, 285
  http://rdf.ncbi.nlm.nih.gov/pubmed/20338999
• B J. Frankfort, et.al., Identification of novel cellular genes transcriptionally suppressed by v-src., Biochemical and biophysical research communications, 1995, 206
  http://rdf.ncbi.nlm.nih.gov/pubmed/7832805
• S. Varmuza, et.al., Isolation of epiblast-specific cDNA clones by differential hybridization with polymerase chain reaction-amplified probes derived from single embryos., Molecular reproduction and development, 1992, 32
  http://rdf.ncbi.nlm.nih.gov/pubmed/1497882
• Leonard B. Maggi, et.al., Nucleophosmin serves as a rate-limiting nuclear export chaperone for the Mammalian ribosome., Molecular and cellular biology, 2008, 28
  http://rdf.ncbi.nlm.nih.gov/pubmed/18809582
• J. Ferreira, et.al., The biogenesis of the coiled body during early mouse development., Development (Cambridge, England), 1995, 121
  http://rdf.ncbi.nlm.nih.gov/pubmed/7768196
• Dagmar. Wilhelm, et.al., Comparative proteomic analysis to study molecular events during gonad development in mice., Genesis (New York, N.Y. : 2000), 2006, 44
  http://rdf.ncbi.nlm.nih.gov/pubmed/16604525
• Cynthia V. Clower, et.al., The alternative splicing repressors hnRNP A1/A2 and PTB influence pyruvate kinase isoform expression and cell metabolism., Proceedings of the National Academy of Sciences of the United States of America, 2010, 107
  http://rdf.ncbi.nlm.nih.gov/pubmed/20133837
• Oak D. Jo, et.al., Heterogeneous nuclear ribonucleoprotein A1 regulates cyclin D1 and c-myc internal ribosome entry site function through Akt signaling., The Journal of biological chemistry, 2008, 283
  http://rdf.ncbi.nlm.nih.gov/pubmed/18562319
• Y. Ben-David, et.al., Retroviral insertions downstream of the heterogeneous nuclear ribonucleoprotein A1 gene in erythroleukemia cells: evidence that A1 is not essential for cell growth., Molecular and cellular biology, 1992, 12
  http://rdf.ncbi.nlm.nih.gov/pubmed/1406633
• X. Yang, et.al., The A1 and A1B proteins of heterogeneous nuclear ribonucleoparticles modulate 5' splice site selection in vivo., Proceedings of the National Academy of Sciences of the United States of America, 1994, 91
  http://rdf.ncbi.nlm.nih.gov/pubmed/8041722

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• cytoplasm
  http://purl.obolibrary.org/obo/GO_0005737
• spliceosomal complex
  http://purl.obolibrary.org/obo/GO_0005681
• alternative mRNA splicing, via spliceosome
  http://purl.obolibrary.org/obo/GO_0000380
• nucleotide binding
  http://purl.obolibrary.org/obo/GO_0000166
• nuclear import
  http://purl.obolibrary.org/obo/GO_0051170
• RNA binding
  http://purl.obolibrary.org/obo/GO_0003723
• transport
  http://purl.obolibrary.org/obo/GO_0006810
• nuclear export
  http://purl.obolibrary.org/obo/GO_0051168
• RNA splicing
  http://purl.obolibrary.org/obo/GO_0008380
• single-stranded DNA binding
  http://purl.obolibrary.org/obo/GO_0006330
• catalytic step 2 spliceosome
  http://purl.obolibrary.org/obo/GO_0071013
• http://purl.obolibrary.org/obo/GO_1990904
• single-stranded DNA binding
  http://purl.obolibrary.org/obo/GO_0003697
• nucleic acid binding
  http://purl.obolibrary.org/obo/GO_0003676
• mRNA transport
  http://purl.obolibrary.org/obo/GO_0051028
• nucleus
  http://purl.obolibrary.org/obo/GO_0005634
• mRNA processing
  http://purl.obolibrary.org/obo/GO_0006397
• nucleoplasm
  http://purl.obolibrary.org/obo/GO_0005654
• nucleolus
  http://purl.obolibrary.org/obo/GO_0005730

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

• http://www.genome.jp/dbget-bin/www_bget?map03040

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName

• Spliceosome