CD02014

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD02014

CD02014

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Bptf

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• bromodomain PHD finger transcription factor

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• bromodomain PHD finger transcription factor
• fetal Alzheimer antigen

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• 9430093H17Rik
• BPTF
• FAC1
• Falz
• NURF301

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/207165

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• bromodomain PHD finger transcription factor
  http://metadb.riken.jp/db/mgi_rdf/MGI:2444008

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_176850

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000040481

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.343986

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• K. Araki, et.al., Exchangeable gene trap using the Cre/mutated lox system., Cellular and molecular biology (Noisy-le-Grand, France), 1999, 45
  http://rdf.ncbi.nlm.nih.gov/pubmed/10512203
• M H. Jones, et.al., Identification and characterization of BPTF, a novel bromodomain transcription factor., Genomics, 2000, 63
  http://rdf.ncbi.nlm.nih.gov/pubmed/10662542
• H. Xiao, et.al., Dual functions of largest NURF subunit NURF301 in nucleosome sliding and transcription factor interactions., Molecular cell, 2001, 8
  http://rdf.ncbi.nlm.nih.gov/pubmed/11583616
• Richard J. Mural, et.al., A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome., Science (New York, N.Y.), 2002, 296
  http://rdf.ncbi.nlm.nih.gov/pubmed/12040188
• Doug. Stryke, et.al., BayGenomics: a resource of insertional mutations in mouse embryonic stem cells., Nucleic acids research, 2003, 31
  http://rdf.ncbi.nlm.nih.gov/pubmed/12520002
• James. Rhodes, et.al., Altered expression and distribution of FAC1 during NGF-induced neurite outgrowth of PC12 cells., Neuroreport, 2003, 14
  http://rdf.ncbi.nlm.nih.gov/pubmed/12634501
他7件を見る
• Orr. Barak, et.al., Isolation of human NURF: a regulator of Engrailed gene expression., The EMBO journal, 2003, 22
  http://rdf.ncbi.nlm.nih.gov/pubmed/14609955
• Alexei A. Sharov, et.al., Transcriptome analysis of mouse stem cells and early embryos., PLoS biology, 2003, 1
  http://rdf.ncbi.nlm.nih.gov/pubmed/14691545
• Joseph. Landry, et.al., Essential role of chromatin remodeling protein Bptf in early mouse embryos and embryonic stem cells., PLoS genetics, 2008, 4
  http://rdf.ncbi.nlm.nih.gov/pubmed/18974875
• Qin. Shen, et.al., Expression QTL and regulatory network analysis of microtubule-associated protein tau gene., Parkinsonism & related disorders, 2009, 15
  http://rdf.ncbi.nlm.nih.gov/pubmed/19233709
• Guoji. Guo, et.al., Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst., Developmental cell, 2010, 18
  http://rdf.ncbi.nlm.nih.gov/pubmed/20412781
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• Joseph W. Landry, et.al., Chromatin remodeling complex NURF regulates thymocyte maturation., Genes & development, 2011, 25
  http://rdf.ncbi.nlm.nih.gov/pubmed/21289071

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• negative regulation of transcription from RNA polymerase II promoter
  http://purl.obolibrary.org/obo/GO_0000122
• embryonic placenta development
  http://purl.obolibrary.org/obo/GO_0001892
• nucleus
  http://purl.obolibrary.org/obo/GO_0005634
• chromatin remodeling
  http://purl.obolibrary.org/obo/GO_0006338
• transcription, DNA-templated
  http://purl.obolibrary.org/obo/GO_0006351
• regulation of transcription, DNA-templated
  http://purl.obolibrary.org/obo/GO_0006355
他8件を見る
• brain development
  http://purl.obolibrary.org/obo/GO_0007420
• endoderm development
  http://purl.obolibrary.org/obo/GO_0007492
• transcription factor binding
  http://purl.obolibrary.org/obo/GO_0008134
• anterior/posterior pattern specification
  http://purl.obolibrary.org/obo/GO_0009952
• NURF complex
  http://purl.obolibrary.org/obo/GO_0016589
• sequence-specific DNA binding
  http://purl.obolibrary.org/obo/GO_0043565
• positive regulation of transcription, DNA-templated
  http://purl.obolibrary.org/obo/GO_0045893
• metal ion binding
  http://purl.obolibrary.org/obo/GO_0046872

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName