CD02201

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD02201

CD02201

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Slc6a13

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• solute carrier family 6 (neurotransmitter transporter, GABA), member 13

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• sodium- and chloride-dependent GABA transporter 3
• sodium- and chloride-dependent GABA transporter 2
• gamma-aminobutyric acid (GABA-A) transporter 3
• GAT-3
• solute carrier family 6 member 13
• solute carrier family 6 (neurotransmitter transporter, GABA), member 13
• GAT-2

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• Gabt3
• GAT3

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/14412

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• solute carrier family 6 (neurotransmitter transporter, GABA), member 13
  http://metadb.riken.jp/db/mgi_rdf/MGI:95629

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_144512

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000030108

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.258596

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• Andrea. Kwakowsky, et.al., GABA neurotransmitter signaling in the developing mouse lens: dynamic regulation of components and functionality., Developmental dynamics : an official publication of the American Association of Anatomists, 2008, 237
  http://rdf.ncbi.nlm.nih.gov/pubmed/18985723
• Q R. Liu, et.al., Molecular characterization of four pharmacologically distinct gamma-aminobutyric acid transporters in mouse brain [corrected]., The Journal of biological chemistry, 1993, 268
  http://rdf.ncbi.nlm.nih.gov/pubmed/8420981
• Chenying. Guo, et.al., Plasmalemmal and vesicular gamma-aminobutyric acid transporter expression in the developing mouse retina., The Journal of comparative neurology, 2009, 512
  http://rdf.ncbi.nlm.nih.gov/pubmed/18975268
• Susan. Magdaleno, et.al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system., PLoS biology, 2006, 4
  http://rdf.ncbi.nlm.nih.gov/pubmed/16602821
• Pär J. Höglund, et.al., The repertoire of solute carriers of family 6: identification of new human and rodent genes., Biochemical and biophysical research communications, 2005, 336
  http://rdf.ncbi.nlm.nih.gov/pubmed/16125675
• Melissa H. Little, et.al., A high-resolution anatomical ontology of the developing murine genitourinary tract., Gene expression patterns : GEP, 2007, 7
  http://rdf.ncbi.nlm.nih.gov/pubmed/17452023
• Richard D. Whitlow, et.al., The anticonvulsant valproate increases the turnover rate of gamma-aminobutyric acid transporters., The Journal of biological chemistry, 2003, 278
  http://rdf.ncbi.nlm.nih.gov/pubmed/12595533
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• F. Jursky, et.al., Developmental expression of the neurotransmitter transporter GAT3., Journal of neuroscience research, 1999, 55
  http://rdf.ncbi.nlm.nih.gov/pubmed/10348670
• J E. Evans, et.al., Embryonic and postnatal expression of four gamma-aminobutyric acid transporter mRNAs in the mouse brain and leptomeninges., The Journal of comparative neurology, 1996, 376
  http://rdf.ncbi.nlm.nih.gov/pubmed/8956109

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• integral component of plasma membrane
  http://purl.obolibrary.org/obo/GO_0005887
• L-amino acid transport
  http://purl.obolibrary.org/obo/GO_0015807
• neurotransmitter:sodium symporter activity
  http://purl.obolibrary.org/obo/GO_0005328
• neurotransmitter transport
  http://purl.obolibrary.org/obo/GO_0006836
• sodium ion export from cell
  http://purl.obolibrary.org/obo/GO_0036376
• transmembrane transport
  http://purl.obolibrary.org/obo/GO_0055085
• symporter activity
  http://purl.obolibrary.org/obo/GO_0015293
• membrane
  http://purl.obolibrary.org/obo/GO_0016020
• gamma-aminobutyric acid:sodium symporter activity
  http://purl.obolibrary.org/obo/GO_0005332
• integral component of membrane
  http://purl.obolibrary.org/obo/GO_0016021
• neurotransmitter binding
  http://purl.obolibrary.org/obo/GO_0042165
• amino acid transmembrane transport
  http://purl.obolibrary.org/obo/GO_0003333
• gamma-aminobutyric acid transport
  http://purl.obolibrary.org/obo/GO_0015812
• transport
  http://purl.obolibrary.org/obo/GO_0006810

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

• http://www.genome.jp/dbget-bin/www_bget?map04727

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName

• GABAergic synapse