CD02282

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD02282

CD02282

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Smoc1

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• SPARC related modular calcium binding 1

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• SPARC-related gene protein
• secreted modular calcium binding protein 1
• SPARC-related modular calcium-binding protein 1
• SMOC-1
• SPARC related modular calcium binding 1
• secreted modular calcium-binding protein 1

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• SRG
• SPARC-related protein
• AI848508
• 2600002F22Rik

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/64075

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• SPARC related modular calcium binding 1
  http://metadb.riken.jp/db/mgi_rdf/MGI:1929878

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_001146217
• https://www.ncbi.nlm.nih.gov/nuccore/NM_022316

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000021136

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.273295

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=608488

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• Lely A. Quina, et.al., Brn3a and Nurr1 mediate a gene regulatory pathway for habenula development., The Journal of neuroscience : the official journal of the Society for Neuroscience, 2009, 29
  http://rdf.ncbi.nlm.nih.gov/pubmed/19906978
• Ri-ichiroh. Manabe, et.al., Transcriptome-based systematic identification of extracellular matrix proteins., Proceedings of the National Academy of Sciences of the United States of America, 2008, 105
  http://rdf.ncbi.nlm.nih.gov/pubmed/18757743
• Vincent W. Keng, et.al., Region-specific saturation germline mutagenesis in mice using the Sleeping Beauty transposon system., Nature methods, 2005, 2
  http://rdf.ncbi.nlm.nih.gov/pubmed/16179923
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• Dorothy E. Pazin, et.al., Developmental expression of Smoc1 and Smoc2 suggests potential roles in fetal gonad and reproductive tract differentiation., Developmental dynamics : an official publication of the American Association of Anatomists, 2009, 238
  http://rdf.ncbi.nlm.nih.gov/pubmed/19842175
• Ippei. Okada, et.al., SMOC1 is essential for ocular and limb development in humans and mice., American journal of human genetics, 2011, 88
  http://rdf.ncbi.nlm.nih.gov/pubmed/21194678
• Lili C. Kudo, et.al., Genetic analysis of anterior posterior expression gradients in the developing mammalian forebrain., Cerebral cortex (New York, N.Y. : 1991), 2007, 17
  http://rdf.ncbi.nlm.nih.gov/pubmed/17150988
• Owen J. Tamplin, et.al., Microarray analysis of Foxa2 mutant mouse embryos reveals novel gene expression and inductive roles for the gastrula organizer and its derivatives., BMC genomics, 2008, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/18973680
• Nikolaus. Gersdorff, et.al., Secreted modular calcium-binding protein-1 localization during mouse embryogenesis., Histochemistry and cell biology, 2006, 126
  http://rdf.ncbi.nlm.nih.gov/pubmed/16736127
• Christian. Vannahme, et.al., Characterization of SMOC-2, a modular extracellular calcium-binding protein., The Biochemical journal, 2003, 373
  http://rdf.ncbi.nlm.nih.gov/pubmed/12741954

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• calcium ion binding
  http://purl.obolibrary.org/obo/GO_0005509
• extracellular matrix binding
  http://purl.obolibrary.org/obo/GO_0050840
• cell differentiation
  http://purl.obolibrary.org/obo/GO_0030154
• limb development
  http://purl.obolibrary.org/obo/GO_0060173
• extracellular region
  http://purl.obolibrary.org/obo/GO_0005576
• positive regulation of cell-substrate adhesion
  http://purl.obolibrary.org/obo/GO_0010811
• regulation of osteoblast differentiation
  http://purl.obolibrary.org/obo/GO_0045667
• extracellular matrix organization
  http://purl.obolibrary.org/obo/GO_0030198
• eye development
  http://purl.obolibrary.org/obo/GO_0001654
• basement membrane
  http://purl.obolibrary.org/obo/GO_0005604
• proteinaceous extracellular matrix
  http://purl.obolibrary.org/obo/GO_0005578
• signal transduction
  http://purl.obolibrary.org/obo/GO_0007165

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName