CD02581

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD02581

CD02581

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Rab5c

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• RAB5C, member RAS oncogene family

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• ras-related protein Rab-5C
• RAB5C, member RAS oncogene family

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• Rabl
• AI326010

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/19345

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• RAB5C, member RAS oncogene family
  http://metadb.riken.jp/db/mgi_rdf/MGI:105306

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_024456

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000019173

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.29829

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=604037

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• A. Lütcke, et.al., Rab17, a novel small GTPase, is specific for epithelial cells and is induced during cell polarization., The Journal of cell biology, 1993, 121
  http://rdf.ncbi.nlm.nih.gov/pubmed/8486736
• M. Pershouse, et.al., BAC contig from a 3-cM region of mouse chromosome 11 surrounding Brca1., Genomics, 2000, 69
  http://rdf.ncbi.nlm.nih.gov/pubmed/11013085
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• C. Bucci, et.al., Co-operative regulation of endocytosis by three Rab5 isoforms., FEBS letters, 1995, 366
  http://rdf.ncbi.nlm.nih.gov/pubmed/7789520
• Olav. Olsen, et.al., Neurotransmitter release regulated by a MALS-liprin-alpha presynaptic complex., The Journal of cell biology, 2005, 170
  http://rdf.ncbi.nlm.nih.gov/pubmed/16186258
• P. Chavrier, et.al., The complexity of the Rab and Rho GTP-binding protein subfamilies revealed by a PCR cloning approach., Gene, 1992, 112
  http://rdf.ncbi.nlm.nih.gov/pubmed/1555775
• Susan. Magdaleno, et.al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system., PLoS biology, 2006, 4
  http://rdf.ncbi.nlm.nih.gov/pubmed/16602821
• Takashi. Itoh, et.al., Screening for target Rabs of TBC (Tre-2/Bub2/Cdc16) domain-containing proteins based on their Rab-binding activity., Genes to cells : devoted to molecular & cellular mechanisms, 2006, 11
  http://rdf.ncbi.nlm.nih.gov/pubmed/16923123
• E. Merithew, et.al., Structural plasticity of an invariant hydrophobic triad in the switch regions of Rab GTPases is a determinant of effector recognition., The Journal of biological chemistry, 2001, 276
  http://rdf.ncbi.nlm.nih.gov/pubmed/11278565
• Malavika. Bhattacharya, et.al., IL-6 and IL-12 specifically regulate the expression of Rab5 and Rab7 via distinct signaling pathways., The EMBO journal, 2006, 25
  http://rdf.ncbi.nlm.nih.gov/pubmed/16763563

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• endosome organization
  http://purl.obolibrary.org/obo/GO_0007032
• endosome
  http://purl.obolibrary.org/obo/GO_0005768
• GTPase activity
  http://purl.obolibrary.org/obo/GO_0003924
• GTP binding
  http://purl.obolibrary.org/obo/GO_0005525
• transport
  http://purl.obolibrary.org/obo/GO_0006810
• small GTPase mediated signal transduction
  http://purl.obolibrary.org/obo/GO_0007264
• endocytic vesicle
  http://purl.obolibrary.org/obo/GO_0030139
• protein binding
  http://purl.obolibrary.org/obo/GO_0005515
• cytoplasmic vesicle
  http://purl.obolibrary.org/obo/GO_0031410
• plasma membrane
  http://purl.obolibrary.org/obo/GO_0005886
• protein transport
  http://purl.obolibrary.org/obo/GO_0015031
• nucleotide binding
  http://purl.obolibrary.org/obo/GO_0000166
• membrane
  http://purl.obolibrary.org/obo/GO_0016020
• regulation of endocytosis
  http://purl.obolibrary.org/obo/GO_0030100

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

• http://www.genome.jp/dbget-bin/www_bget?map05152
• http://www.genome.jp/dbget-bin/www_bget?map04144
• http://www.genome.jp/dbget-bin/www_bget?map05146
• http://www.genome.jp/dbget-bin/www_bget?map04145
• http://www.genome.jp/dbget-bin/www_bget?map04962

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName

• Vasopressin-regulated water reabsorption
• Phagosome
• Endocytosis
• Amoebiasis
• Tuberculosis