CD02616

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD02616

CD02616

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Cdc5l

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• cell division cycle 5-like (S. pombe)

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• cell division cycle 5-related protein
• cdc5-like protein
• cell division cycle 5-like (S. pombe)

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• PCDC5RP
• AA408004
• 1200002I02Rik

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/71702

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• cell division cycle 5-like (S. pombe)
  http://metadb.riken.jp/db/mgi_rdf/MGI:1918952

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_152810

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000023932

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.28270

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=602868

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• W J. Lemon, et.al., Identification of candidate lung cancer susceptibility genes in mouse using oligonucleotide arrays., Journal of medical genetics, 2002, 39
  http://rdf.ncbi.nlm.nih.gov/pubmed/12205107
• C G. Burns, et.al., Evidence that Myb-related CDC5 proteins are required for pre-mRNA splicing., Proceedings of the National Academy of Sciences of the United States of America, 1999, 96
  http://rdf.ncbi.nlm.nih.gov/pubmed/10570151
• Doug. Stryke, et.al., BayGenomics: a resource of insertional mutations in mouse embryonic stem cells., Nucleic acids research, 2003, 31
  http://rdf.ncbi.nlm.nih.gov/pubmed/12520002
• Paul. Ajuh, et.al., Identification of peptide inhibitors of pre-mRNA splicing derived from the essential interaction domains of CDC5L and PLRG1., Nucleic acids research, 2003, 31
  http://rdf.ncbi.nlm.nih.gov/pubmed/14576297
• C H. Jiang, et.al., The effects of aging on gene expression in the hypothalamus and cortex of mice., Proceedings of the National Academy of Sciences of the United States of America, 2001, 98
  http://rdf.ncbi.nlm.nih.gov/pubmed/11172053
• Guoji. Guo, et.al., Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst., Developmental cell, 2010, 18
  http://rdf.ncbi.nlm.nih.gov/pubmed/20412781
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• Noriko. Okazaki, et.al., Prediction of the coding sequences of mouse homologues of KIAA gene: IV. The complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries., DNA research : an international journal for rapid publication of reports on genes and genomes, 2004, 11
  http://rdf.ncbi.nlm.nih.gov/pubmed/15368895
• P. Ajuh, et.al., A direct interaction between the carboxyl-terminal region of CDC5L and the WD40 domain of PLRG1 is essential for pre-mRNA splicing., The Journal of biological chemistry, 2001, 276
  http://rdf.ncbi.nlm.nih.gov/pubmed/11544257
• Shigetoshi. Yokoyama, et.al., A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58., Developmental cell, 2009, 17
  http://rdf.ncbi.nlm.nih.gov/pubmed/20059953
• Hongjun. Shu, et.al., Identification of phosphoproteins and their phosphorylation sites in the WEHI-231 B lymphoma cell line., Molecular & cellular proteomics : MCP, 2004, 3
  http://rdf.ncbi.nlm.nih.gov/pubmed/14729942

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• nuclear speck
  http://purl.obolibrary.org/obo/GO_0016607
• nucleolus
  http://purl.obolibrary.org/obo/GO_0005730
• cell cycle
  http://purl.obolibrary.org/obo/GO_0007049
• protein domain specific binding
  http://purl.obolibrary.org/obo/GO_0019904
• spliceosomal complex
  http://purl.obolibrary.org/obo/GO_0005681
• mRNA processing
  http://purl.obolibrary.org/obo/GO_0006397
• RNA binding
  http://purl.obolibrary.org/obo/GO_0003723
• cytoplasm
  http://purl.obolibrary.org/obo/GO_0005737
• DNA binding
  http://purl.obolibrary.org/obo/GO_0003677
• nucleus
  http://purl.obolibrary.org/obo/GO_0005634
• catalytic step 2 spliceosome
  http://purl.obolibrary.org/obo/GO_0071013
• transcription, DNA-templated
  http://purl.obolibrary.org/obo/GO_0006351
• regulation of transcription, DNA-templated
  http://purl.obolibrary.org/obo/GO_0006355
• RNA splicing
  http://purl.obolibrary.org/obo/GO_0008380

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

• http://www.genome.jp/dbget-bin/www_bget?map03040

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName

• Spliceosome