CD02670

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD02670

CD02670

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Psat1

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• phosphoserine aminotransferase 1

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• endometrial progesterone-induced protein
• phosphohydroxythreonine aminotransferase
• phosphoserine aminotransferase
• phosphoserine aminotransferase 1

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• D8Ertd814e
• PSA
• EPIP
• Psat

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/107272

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• phosphoserine aminotransferase 1
  http://metadb.riken.jp/db/mgi_rdf/MGI:2183441

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_001205339
• https://www.ncbi.nlm.nih.gov/nuccore/NM_177420

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000024640

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.289936
• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.470456

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=610936

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• M J. Basurko, et.al., Phosphoserine aminotransferase, the second step-catalyzing enzyme for serine biosynthesis., IUBMB life, 1999, 48
  http://rdf.ncbi.nlm.nih.gov/pubmed/10637769
• K. Wertz, et.al., Large-scale screen for genes involved in gonad development., Mechanisms of development, 2000, 98
  http://rdf.ncbi.nlm.nih.gov/pubmed/11044607
• M. Hemberger, et.al., cDNA subtraction cloning reveals novel genes whose temporal and spatial expression indicates association with trophoblast invasion., Developmental biology, 2000, 222
  http://rdf.ncbi.nlm.nih.gov/pubmed/10885754
• Jin. Seo, et.al., Atf4 regulates obesity, glucose homeostasis, and energy expenditure., Diabetes, 2009, 58
  http://rdf.ncbi.nlm.nih.gov/pubmed/19690063
• Doug. Stryke, et.al., BayGenomics: a resource of insertional mutations in mouse embryonic stem cells., Nucleic acids research, 2003, 31
  http://rdf.ncbi.nlm.nih.gov/pubmed/12520002
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• catalytic activity
  http://purl.obolibrary.org/obo/GO_0003824
• transferase activity
  http://purl.obolibrary.org/obo/GO_0016740
• O-phospho-L-serine:2-oxoglutarate aminotransferase activity
  http://purl.obolibrary.org/obo/GO_0004648
• cellular amino acid biosynthetic process
  http://purl.obolibrary.org/obo/GO_0008652
• pyridoxal phosphate binding
  http://purl.obolibrary.org/obo/GO_0030170
• metabolic process
  http://purl.obolibrary.org/obo/GO_0008152
• L-serine biosynthetic process
  http://purl.obolibrary.org/obo/GO_0006564
• transaminase activity
  http://purl.obolibrary.org/obo/GO_0008483

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

• http://www.genome.jp/dbget-bin/www_bget?map00260
• http://www.genome.jp/dbget-bin/www_bget?map01100
• http://www.genome.jp/dbget-bin/www_bget?map00750

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName

• serine and threonine metabolism
• Vitamin B6 metabolism
• Glycine
• Metabolic pathways