CD02738

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD02738

CD02738

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Hnrnpd

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• heterogeneous nuclear ribonucleoprotein D

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• AU-rich element RNA-binding protein 1
• heterogeneous nuclear ribonucleoprotein D0
• hnRNP D0
• heterogeneous nuclear ribonucleoprotein D

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• Auf1
• C230004L04
• Hnrpd

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/11991

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• heterogeneous nuclear ribonucleoprotein D
  http://metadb.riken.jp/db/mgi_rdf/MGI:101947

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_007516
• https://www.ncbi.nlm.nih.gov/nuccore/NM_001077267
• https://www.ncbi.nlm.nih.gov/nuccore/NM_001077265
• https://www.ncbi.nlm.nih.gov/nuccore/NM_001077266

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000000568

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.150231

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=601324

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• A. Gouble, et.al., Synchronous and regulated expression of two AU-binding proteins, AUF1 and HuR, throughout murine development., Oncogene, 2000, 19
  http://rdf.ncbi.nlm.nih.gov/pubmed/11103939
• Agnàs. Gouble, et.al., A new player in oncogenesis: AUF1/hnRNPD overexpression leads to tumorigenesis in transgenic mice., Cancer research, 2002, 62
  http://rdf.ncbi.nlm.nih.gov/pubmed/11888925
• K. Ehrenman, et.al., Characterization of cDNAs encoding the murine A+U-rich RNA-binding protein AUF1., Gene, 1994, 149
  http://rdf.ncbi.nlm.nih.gov/pubmed/7959009
• S. Sobue, et.al., v-Src oncogene product increases sphingosine kinase 1 expression through mRNA stabilization: alteration of AU-rich element-binding proteins., Oncogene, 2008, 27
  http://rdf.ncbi.nlm.nih.gov/pubmed/18574469
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• Patricia A. Pioli, et.al., Lactate dehydrogenase is an AU-rich element-binding protein that directly interacts with AUF1., The Journal of biological chemistry, 2002, 277
  http://rdf.ncbi.nlm.nih.gov/pubmed/12107167
• Kyung-Chul. Woo, et.al., Circadian amplitude of cryptochrome 1 is modulated by mRNA stability regulation via cytoplasmic hnRNP D oscillation., Molecular and cellular biology, 2010, 30
  http://rdf.ncbi.nlm.nih.gov/pubmed/19858287
• Navid. Sadri, et.al., AUF1 is involved in splenic follicular B cell maintenance., BMC immunology, 2010, 11
  http://rdf.ncbi.nlm.nih.gov/pubmed/20064252
• Shigemitsu. Yasuda, et.al., Interaction between 3' untranslated region of calcitonin receptor messenger ribonucleic acid (RNA) and adenylate/uridylate (AU)-rich element binding proteins (AU-rich RNA-binding factor 1 and Hu antigen R)., Endocrinology, 2004, 145
  http://rdf.ncbi.nlm.nih.gov/pubmed/14715706
• Navid. Sadri, et.al., Auf1/Hnrnpd-deficient mice develop pruritic inflammatory skin disease., The Journal of investigative dermatology, 2009, 129
  http://rdf.ncbi.nlm.nih.gov/pubmed/18830269

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• nucleus
  http://purl.obolibrary.org/obo/GO_0005634
• telomeric DNA binding
  http://purl.obolibrary.org/obo/GO_0042162
• nucleic acid binding
  http://purl.obolibrary.org/obo/GO_0003676
• cytosol
  http://purl.obolibrary.org/obo/GO_0005829
• RNA binding
  http://purl.obolibrary.org/obo/GO_0003723
• DNA binding
  http://purl.obolibrary.org/obo/GO_0003677
• regulation of mRNA stability
  http://purl.obolibrary.org/obo/GO_0043488
• nucleotide binding
  http://purl.obolibrary.org/obo/GO_0000166
• transcription, DNA-templated
  http://purl.obolibrary.org/obo/GO_0006351
• http://purl.obolibrary.org/obo/GO_1990904
• regulation of transcription, DNA-templated
  http://purl.obolibrary.org/obo/GO_0006355
• cytoplasm
  http://purl.obolibrary.org/obo/GO_0005737
• protein binding
  http://purl.obolibrary.org/obo/GO_0005515
• mRNA stabilization
  http://purl.obolibrary.org/obo/GO_0048255

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName